NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|15831120|ref|NP_309893|]
View 

membrane transport protein [Escherichia coli O157:H7 str. Sakai]

Protein Classification

multidrug effflux MFS transporter( domain architecture ID 13022939)

multidrug resistance (MDR) MFS transporter is a drug/H+ antiporter (DHA) that mediates the efflux of one or more from a variety of drugs and toxic compounds, and confer resistance to these compounds

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26758938|26098515
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
9-382 7.51e-93

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 283.31  E-value: 7.51e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   9 ALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:cd17320   1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  89 CATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:cd17320  81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 169 EISTVLLLGCVLFINETLPENKRG---SSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFS 245
Cdd:cd17320 161 LLGLLLLLLVLLFLPETLPEEKRKpllSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFG 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 246 LVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQ-LPIPALVALFFTIAFCSGIGTVGGAEAM 324
Cdd:cd17320 241 LLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGgLSLWPLVAPLFLIFFGFGLIFPNATSLA 320
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15831120 325 SAVGTQESGTASALMGMSMFVFGGIAAPLSG-FGGETLLKMSLAITVCYTLAFLVALTR 382
Cdd:cd17320 321 LEPFPHVAGTASALLGFLQFLIGALAGALVGlLPNGTALPMGLLILVLGLLALLLLILL 379
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
9-382 7.51e-93

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 283.31  E-value: 7.51e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   9 ALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:cd17320   1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  89 CATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:cd17320  81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 169 EISTVLLLGCVLFINETLPENKRG---SSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFS 245
Cdd:cd17320 161 LLGLLLLLLVLLFLPETLPEEKRKpllSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFG 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 246 LVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQ-LPIPALVALFFTIAFCSGIGTVGGAEAM 324
Cdd:cd17320 241 LLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGgLSLWPLVAPLFLIFFGFGLIFPNATSLA 320
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15831120 325 SAVGTQESGTASALMGMSMFVFGGIAAPLSG-FGGETLLKMSLAITVCYTLAFLVALTR 382
Cdd:cd17320 321 LEPFPHVAGTASALLGFLQFLIGALAGALVGlLPNGTALPMGLLILVLGLLALLLLILL 379
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
9-377 2.68e-62

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 204.93  E-value: 2.68e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120     9 ALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:TIGR00710   7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    89 CATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:TIGR00710  87 LALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   169 EISTVLLLGCVLFINETLPENKRGSSLL--LTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSL 246
Cdd:TIGR00710 167 LAGILLSALIFFILPETLPYEARIQISTyfETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   247 VFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPipaLVALFFTIAFCSGIG-----TVGGA 321
Cdd:TIGR00710 247 LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG---SWAMIIGPMMFVGIGnsmisSIAMA 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120   322 EAMSAVGTQeSGTASALMGMSMFVFGGIAAPL-SGFGGETLLKMSLAITVCYTLAFL 377
Cdd:TIGR00710 324 YALEDFPHV-AGTASALFGTLRLVLGAIVGYLvSLIHGNTAWPMSLSCLVLAVVSVL 379
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
20-377 1.65e-51

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 176.26  E-value: 1.65e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   20 PMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLV 99
Cdd:PRK11102   4 PLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  100 VWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCV 179
Cdd:PRK11102  84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  180 LFINETLPENKRGS-SLLLTGR---SVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGL 255
Cdd:PRK11102 164 FFIPETLPKERRQPfHLRTTIRnfaSLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  256 IIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALValFFTIAFCSGIGTVgGAEAMSAVGT---QES 332
Cdd:PRK11102 244 FVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALV--VGVAAFVGCVSMI-SSNAMAVILDefpHMA 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 15831120  333 GTASALMGMSMFVFGGIA-APLSGFGGETLLKMSLAITVCYTLAFL 377
Cdd:PRK11102 321 GTASSLAGTLRFGIGAIVgALLSLAPFTSAWPMVWSMAFCSILSIL 366
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
10-350 1.97e-46

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 162.07  E-value: 1.97e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:COG2814  13 LALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:COG2814  93 ALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAV 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 170 ISTVLLLGCVLFINETLPENKRgsSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:COG2814 173 LALLALLLLLRLLPESRPAARA--RLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLA 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 250 LNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTvlcAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGT 329
Cdd:COG2814 251 LFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLL---ALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPP 327
                       330       340
                ....*....|....*....|.
gi 15831120 330 QESGTASALMGMSMFVFGGIA 350
Cdd:COG2814 328 EARGRASGLYNSAFFLGGPLA 348
MFS_1 pfam07690
Major Facilitator Superfamily;
12-351 1.01e-28

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 114.44  E-value: 1.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    12 LGLLAGIGPMCTDLYLPALPE-MSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCA 90
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLlLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    91 TTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEI 170
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   171 STVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMR---FCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLV 247
Cdd:pfam07690 161 SLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDpvlWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   248 FGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAV 327
Cdd:pfam07690 241 LGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLA 320
                         330       340
                  ....*....|....*....|....
gi 15831120   328 GTQESGTASALMGMSMFVFGGIAA 351
Cdd:pfam07690 321 PKEERGTASGLYNTAGSLGGALGP 344
 
Name Accession Description Interval E-value
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
9-382 7.51e-93

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 283.31  E-value: 7.51e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   9 ALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:cd17320   1 LLLLALLVALGPLAIDMYLPALPAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  89 CATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:cd17320  81 CALASSIEQLLIARFLQGLGAAAGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 169 EISTVLLLGCVLFINETLPENKRG---SSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFS 245
Cdd:cd17320 161 LLGLLLLLLVLLFLPETLPEEKRKpllSSLLRAYKRVLKNRRFLGYALALGLSFAGLFAYLAAAPFIYIEQLGLSPAQFG 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 246 LVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQ-LPIPALVALFFTIAFCSGIGTVGGAEAM 324
Cdd:cd17320 241 LLFALNAIALILGSLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLLAALLGgLSLWPLVAPLFLIFFGFGLIFPNATSLA 320
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 15831120 325 SAVGTQESGTASALMGMSMFVFGGIAAPLSG-FGGETLLKMSLAITVCYTLAFLVALTR 382
Cdd:cd17320 321 LEPFPHVAGTASALLGFLQFLIGALAGALVGlLPNGTALPMGLLILVLGLLALLLLILL 379
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
9-377 2.68e-62

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 204.93  E-value: 2.68e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120     9 ALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:TIGR00710   7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    89 CATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:TIGR00710  87 LALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   169 EISTVLLLGCVLFINETLPENKRGSSLL--LTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSL 246
Cdd:TIGR00710 167 LAGILLSALIFFILPETLPYEARIQISTyfETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   247 VFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPipaLVALFFTIAFCSGIG-----TVGGA 321
Cdd:TIGR00710 247 LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG---SWAMIIGPMMFVGIGnsmisSIAMA 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120   322 EAMSAVGTQeSGTASALMGMSMFVFGGIAAPL-SGFGGETLLKMSLAITVCYTLAFL 377
Cdd:TIGR00710 324 YALEDFPHV-AGTASALFGTLRLVLGAIVGYLvSLIHGNTAWPMSLSCLVLAVVSVL 379
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
20-377 1.65e-51

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 176.26  E-value: 1.65e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   20 PMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLV 99
Cdd:PRK11102   4 PLAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  100 VWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCV 179
Cdd:PRK11102  84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  180 LFINETLPENKRGS-SLLLTGR---SVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGL 255
Cdd:PRK11102 164 FFIPETLPKERRQPfHLRTTIRnfaSLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  256 IIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALValFFTIAFCSGIGTVgGAEAMSAVGT---QES 332
Cdd:PRK11102 244 FVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALV--VGVAAFVGCVSMI-SSNAMAVILDefpHMA 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 15831120  333 GTASALMGMSMFVFGGIA-APLSGFGGETLLKMSLAITVCYTLAFL 377
Cdd:PRK11102 321 GTASSLAGTLRFGIGAIVgALLSLAPFTSAWPMVWSMAFCSILSIL 366
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
10-350 1.97e-46

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 162.07  E-value: 1.97e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:COG2814  13 LALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:COG2814  93 ALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAV 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 170 ISTVLLLGCVLFINETLPENKRgsSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:COG2814 173 LALLALLLLLRLLPESRPAARA--RLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLA 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 250 LNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTvlcAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGT 329
Cdd:COG2814 251 LFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLL---ALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPP 327
                       330       340
                ....*....|....*....|.
gi 15831120 330 QESGTASALMGMSMFVFGGIA 350
Cdd:COG2814 328 EARGRASGLYNSAFFLGGPLA 348
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
11-383 7.15e-37

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 137.32  E-value: 7.15e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  11 ILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCA 90
Cdd:cd17474   3 AVFFATLLAVLGVSIVDPILPAIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  91 TTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVsTFDWRTLFWVMAEI 170
Cdd:cd17474  83 LSDSFALLLAGRALQGIGAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLA-AISWRYPFFLLAAL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 171 STVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFML-AGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:cd17474 162 IPVAFLAILFLLPEPKEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLYfFLYFAFLTYLPFLLELLYGISPIIIGLLFA 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 250 LNGIGLIIASWIFSR-LARRINAMTLLRGGLIaaILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAeAMSAVG 328
Cdd:cd17474 242 GWSVLLALGSLFVGRlLKKRFGARRILVIGLL--LYALSLLLLGFVPSLALLLIAIVLFGLGLGLNLPLLTTL-VTELAP 318
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 329 TQESGTASALMGMSMFVFGGIAAPLSGFGGETL-LKMSLAITVCYTLAFLVALTRI 383
Cdd:cd17474 319 EEERGTASSLYNFVRFLGQAVGPLLFGLLLEIFgLSAPFLVGAAIALAAAVLLALL 374
emrD PRK11652
multidrug transporter EmrD;
10-356 2.55e-35

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 133.49  E-value: 2.55e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:PRK11652  11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   90 ATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:PRK11652  91 LFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  170 ISTVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:PRK11652 171 LGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFI 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  250 LNGIGLIIASWIFSRLARRINamTLLRGGLIAAILCALLTVLCAWTQ------LPIPAlvALFFtiaFCSGI----GTVG 319
Cdd:PRK11652 251 LPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWIPGWFGvmnvwtLLVPA--ALFF---FGAGMlfplATSG 323
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 15831120  320 gaeAMSAVGTQeSGTASALMGMSMFVFGGIAAPLSGF 356
Cdd:PRK11652 324 ---AMEPFPYL-AGTAGALLGGLQNIGSGLAALLSAM 356
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
12-377 4.99e-33

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 127.32  E-value: 4.99e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   12 LGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCAT 91
Cdd:PRK11043  11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   92 TNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEIS 171
Cdd:PRK11043  91 VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAIT 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  172 TVLLLGCVLFINEtlPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQkEFGFSPMQFSLVFGLN 251
Cdd:PRK11043 171 LLLILPTLRLKPS--KKARKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQ 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  252 GIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLP-IPALVALFFTIAFCSG-IGTVGGAEAMSAVgT 329
Cdd:PRK11043 248 TIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPsLVPLLIPFCVMAAANGaIYPIVVAQALRPF-P 326
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 15831120  330 QESGTASALMGMSMFVFGGIAAPL-SGFGGETLLKMSLAITVCYTLAFL 377
Cdd:PRK11043 327 QATGKAAALQNTLQLGLCFLASLLvSALISTPLLTTGSVMLSTVVLVAL 375
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
23-356 3.40e-32

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 124.58  E-value: 3.40e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  23 TDLYLPA--LPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:cd17324  13 TTEYVIQglLPDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVL 180
Cdd:cd17324  93 ARALAGLAHGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWR 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 181 FINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASW 260
Cdd:cd17324 173 LLPSLPPKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIGLLLLFGVAGVVGSP 252
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 261 IFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTqlpiPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMG 340
Cdd:cd17324 253 LAGRLADRGGRRALLIALLLLAAALLLLTLLGPSP----LLLLVGLVLWGLGFFAAHSALQTRVLRLAPEARGLASSLYL 328
                       330
                ....*....|....*.
gi 15831120 341 MSMFVFGGIAAPLSGF 356
Cdd:cd17324 329 AAYNLGGALGAALGGL 344
MFS_1 pfam07690
Major Facilitator Superfamily;
12-351 1.01e-28

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 114.44  E-value: 1.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    12 LGLLAGIGPMCTDLYLPALPE-MSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCA 90
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLlLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    91 TTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEI 170
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   171 STVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMR---FCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLV 247
Cdd:pfam07690 161 SLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDpvlWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   248 FGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAV 327
Cdd:pfam07690 241 LGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDLA 320
                         330       340
                  ....*....|....*....|....
gi 15831120   328 GTQESGTASALMGMSMFVFGGIAA 351
Cdd:pfam07690 321 PKEERGTASGLYNTAGSLGGALGP 344
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
21-356 1.52e-28

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 114.60  E-value: 1.52e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  21 MCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:cd17325  10 LGYGIIIPILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVL 180
Cdd:cd17325  90 ARFLQGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALL 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 181 FINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIqsFMLAGLFAYIGSSSFV------LQKEFGFSPMQFSLVFGLNGIG 254
Cdd:cd17325 170 LLPEPRPPPNKRAVSAARLRSGLRLLLRDRRLLA--LFLAIFVLAFAFGALEpflplyAAELGGLSPAQIGLLFGAQGLA 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 255 LIIASWIFSRLARRINAMTLLRGGLiaaILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGT 334
Cdd:cd17325 248 SALSQPPAGKLSDRIGRKPLILIGL---LLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGT 324
                       330       340
                ....*....|....*....|..
gi 15831120 335 ASALMGMSMFVFGGIAAPLSGF 356
Cdd:cd17325 325 AMGLFNTAFSLGMVLGPLLGGF 346
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
1-368 9.76e-27

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 109.73  E-value: 9.76e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    1 MARVSL-SWALILGLLAGIgpmctDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSL 79
Cdd:PRK10473   1 MSRFLLcSFALVLLYPAGI-----DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   80 LLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFD 159
Cdd:PRK10473  76 ALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  160 WRTLFWVMAEISTVLLLGCVLFINETLP-ENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFG 238
Cdd:PRK10473 156 WQSLFYTMAAMGILVLLLSLFILKETRPaRAPAASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMG 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  239 FSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIaAILCALLTVLCAWTQlpipalVALFFTIAFCSGIGTV 318
Cdd:PRK10473 236 FSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV-LFLAAGITLALSPSH------AVSLFGITLICAGFSV 308
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 15831120  319 GGAEAMS-AVG--TQESGTASALMGMSMFVFGGIAAPLSGFGGETLLKMSLAI 368
Cdd:PRK10473 309 GFGVAMSqALGpfSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
27-355 7.49e-26

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 106.87  E-value: 7.49e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  27 LPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQG 106
Cdd:cd17321  16 NVALPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQG 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 107 IAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCvlfinetl 186
Cdd:cd17321  96 IGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLINVPIGLVALLLA-------- 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 187 penkrgssllltgrsvvqnRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLA 266
Cdd:cd17321 168 -------------------RTFSGAVLAAFLLGAALGGLLFLLPLYLQGVLGYSPLQAGLALLPLALAMLVAAPLAGRLA 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 267 RRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALF-FTIAFCSGIGTVGGAeAMSAVGTQESGTASALMGMSMFV 345
Cdd:cd17321 229 DRFGPRLVLVAGLLLTAVGLLLLALLGADSSVWLLLPGLVlLGLGLGLFATPLTNA-ALSSVPKEKAGAASGILNTARQL 307
                       330
                ....*....|
gi 15831120 346 FGGIAAPLSG 355
Cdd:cd17321 308 GGALGVALLG 317
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
10-265 1.13e-25

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 106.51  E-value: 1.13e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:cd17323   2 FIISFLTFVVTFGSSIYSPALPQIAEDFHVSEEVANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGC 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:cd17323  82 ALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWIFWFLAI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 170 ISTVLLLGCVLFINETLpenkrgssllltgrsvvqnrrfmRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:cd17323 162 ISGFCLILIFLFLPIVL-----------------------LLGLYVGLVYAILYLFLTAFPYVFGEVYGFSPGEVGLMYL 218
                       250
                ....*....|....*.
gi 15831120 250 LNGIGLIIASWIFSRL 265
Cdd:cd17323 219 PIGIGALIGSIIGGRL 234
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
52-377 2.50e-25

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 106.18  E-value: 2.50e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:PRK15402  58 LAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIK 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  132 FFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSLLLTGR---SVVQNRRF 208
Cdd:PRK15402 138 ITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRdykLVLKNRRF 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  209 MRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSL----VFGlngiGLIIASWIFSRLARRINAMTLLRGGLIAAIL 284
Cdd:PRK15402 218 VAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLlqvpVFG----ALIAGNLTLARLTSRRPLRSLIRMGLWPMVA 293
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  285 CALLTVLCA-WTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGM-SMFVFG-GIAAPLSGFGGETL 361
Cdd:PRK15402 294 GLLLAALATvISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMlSMLIFTvGIELSKHAYLGGGN 373
                        330
                 ....*....|....*.
gi 15831120  362 LKMSLAITVCYTLAFL 377
Cdd:PRK15402 374 GLFNLFNLANGLLWLL 389
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
10-379 4.94e-24

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 102.27  E-value: 4.94e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:COG2223   8 LLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGG-----SVLSRSIARDKyQGVtltqFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLF 164
Cdd:COG2223  88 ALAVSYWLLLLLGLLLGIGGGGSfavgiALVSKWFPPDR-RGL----ALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAF 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 165 WVMAEISTVLLLGCVLFINETLPENKRGS-SLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQ 243
Cdd:COG2223 163 LILGILLLVVAVLAWLFLRDPPAGAAAAAkASLRDQLEALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLSAAT 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 244 FSLVFGLNGIGLIIASWIFSRLARRINAMTLLrggLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEA 323
Cdd:COG2223 243 AGLLAALFALLGALGRPLGGWLSDRIGGRRVL---LIVFALMALGLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFAL 319
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120 324 MSAV-GTQESGTASALMGMSMFVFGGIAAPLSGFggetllkmSLAITVCYTLAFLVA 379
Cdd:COG2223 320 VPDIfPTKNAGAVYGLVGAAGGLGGFLGPLLFGA--------LLDATGSYTAAFLVF 368
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
29-356 1.19e-23

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 100.71  E-value: 1.19e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  29 ALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA 108
Cdd:COG2271  32 AAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLG 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 109 GAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGcvlfinetlpe 188
Cdd:COG2271 112 EAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAAFLILGLPGLLLALL----------- 180
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 189 nkrgssllltgrsvvqnrRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARR 268
Cdd:COG2271 181 ------------------RFWLLALAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDR 242
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 269 INAMTLlRGGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGG 348
Cdd:COG2271 243 LGRRRK-LVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGA 321

                ....*...
gi 15831120 349 IAAPLSGF 356
Cdd:COG2271 322 LGPLLVGY 329
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
60-353 2.25e-22

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 97.26  E-value: 2.25e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTV 139
Cdd:cd17473  53 PLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFEGEERAKMLGLQSAA 132
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 140 NGLAPVLSPVLGGYIVStFDWRTLFWVMAeISTVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFML 219
Cdd:cd17473 133 MSLGGVVFLLLGGALAE-IGWRAPFLVYL-LALPVLILVLLFLPEPARKSKSAASPGAATAAALPWKRVLPIYFLAFLAM 210
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 220 AGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLrggLIAAILCALLTVLCAWTQLPI 299
Cdd:cd17473 211 LLFYVIPIQLPFLLQERGGGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLL---AIGFALMALGFLLLALASGLW 287
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 15831120 300 PALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFvFGGIAAPL 353
Cdd:cd17473 288 VVLLGAILAGLGFGLLLPTLNSWAMSLVPPELRGRAMGIVTSAFF-LGQFLSPL 340
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
10-291 3.07e-22

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 95.65  E-value: 3.07e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  10 LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:COG0477  17 LALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLC 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:COG0477  97 GLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLINAP 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 170 ISTVLLLGCVLfinetLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:COG0477 177 LGLLALVLRLR-----LPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALLLLLALLLLALL 251
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 15831120 250 LNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVL 291
Cdd:COG0477 252 LLLALLLLAALLLLLLLLLLLALLLALLLLLLLLLLLLLLAL 293
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
52-353 7.38e-21

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 93.02  E-value: 7.38e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd17503  41 LLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRGA 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 132 FFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFinetlpenkrgsSLlltgrSVVQNRRFMRF 211
Cdd:cd17503 121 AMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFYINLPIGILALLLAPLL------------DL-----RLFKDRNFTLG 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 212 CLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLiaaILCALLTVL 291
Cdd:cd17503 184 LLLSFLLGLGLFGAMFLLPLYLQNVLGYSAFESGLVLAPGGLASAILSPLVGRLLDKFGPRLLLLAGL---LLLALGTLL 260
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15831120 292 CAW--TQLPIPALVALFFTIAFCSGIGTV-GGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPL 353
Cdd:cd17503 261 LAFltPDTSLWLIILPLFIRGLGMGLVFMpLNTLALNSLPPEQIGDATALFNTIRQLGGSIGTAL 325
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
52-308 4.38e-20

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 90.74  E-value: 4.38e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVG---------QLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGiAGAGGSVLSRSIArD 122
Cdd:cd17472  33 LIGLALGiygltqaifQIPFGLLSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQG-SGAISSVVMALLA-D 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 123 KYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSLLLTGRSV 202
Cdd:cd17472 111 LTREENRTKAMALIGASIGIAFAISMVLGPLLAAHLGVSGLFLITAILSLVSLLILLFFVPDPPKIVQISEKEKKKLKKL 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 203 VQNRRFMRFCL---IQSFMLAGLFAYIGsssfVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGL 279
Cdd:cd17472 191 LKNKRLLRLDFsifILHFVLMAFFYILP----LLLTQLGGGKGQLWKVYLPAILIGFILMVPFVIYAEKKGKMKQVFVSS 266
                       250       260       270
                ....*....|....*....|....*....|
gi 15831120 280 IAAILCALLTVLCAWTQLP-IPALVALFFT 308
Cdd:cd17472 267 ILLIAVGFLLLLFAATSLWlLIIGLIIFFI 296
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
25-356 4.85e-20

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 90.33  E-value: 4.85e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  25 LYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFI 104
Cdd:cd17504  14 MLSPALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRAL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 105 QGIAGAgGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEIStVLLLGCVLFINe 184
Cdd:cd17504  94 QGIGGA-VFPLAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVA-VLLAALVPLID- 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 185 tlpenkrgssllltgRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQ----KEFGFSPMQFSLVFGLNGIGLIIASW 260
Cdd:cd17504 171 ---------------LRLLRRRNVLLANITALLAGFGMFMVFQLLPQLLQlptpTGFGLGITEAGLLLLPGALVMLIAGP 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 261 IFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALF---FTIAFCSGIGTVggaeaMSAVGTQESGTASA 337
Cdd:cd17504 236 LAGRLIARVGPRRVLLIGLVISAVGLLLLALLHSSLWALVVALLLIgigLGLAFASLPNIV-----VESVPPDRTGIATG 310
                       330
                ....*....|....*....
gi 15831120 338 LMGMSMFVFGGIAAPLSGF 356
Cdd:cd17504 311 MNTVLRTIGSAIGPAIAGA 329
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
21-380 5.59e-20

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 90.56  E-value: 5.59e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  21 MCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:cd06174  10 LARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVS--TFDWRTLFWVMAEISTVLLLGC 178
Cdd:cd06174  90 GRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASslGFGWRAVFLIAAALALLAAILL 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 179 VLFINETLPENKRGSSLLLTG------RSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNG 252
Cdd:cd06174 170 LLVVPDPPESARAKNEEASSKsvlkllKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSVAVAGLLLSLFG 249
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 253 IGLIIASWIFSRLARR-INAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTqe 331
Cdd:cd06174 250 LAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIR-- 327
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*....
gi 15831120 332 sGTASALMGMSMFVFGGIAAPLSGFGGETLLKMSLAITVCYTLAFLVAL 380
Cdd:cd06174 328 -GTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLAAI 375
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
21-380 9.60e-19

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 86.83  E-value: 9.60e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  21 MCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:COG0738  22 FATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLL 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAGGSVLSRSIARDKYQGvTLTQFFALLMTVNGLAPVLSPVLGGYIVS---TFDWRTLFWVMAEISTVLLLG 177
Cdd:COG0738 102 ALFLLGLGLGLLDVAANPYVAALGPE-TAASRLNLLHAFFSLGALLGPLLGGLLILlglSLSWHLPYLILAVLLLLLALL 180
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 178 CVLF-INETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLI 256
Cdd:COG0738 181 FLRSkLPEIEEEEEEAAGSAASLKSLLKNPRLLLGGLAIFLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLSLFWGGMT 260
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 257 IASWIFSRLARRINAMTLLRGGLIAAILCALLTVLcawTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTAS 336
Cdd:COG0738 261 IGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLALL---APGPWLALIGLALVGLGLSLMFPTIFSLALDGLGKRTAAAVS 337
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*.
gi 15831120 337 ALMGMSMFVfGGIAAPLSGFGGETL-LKMSLAI-TVCYTLAFLVAL 380
Cdd:COG0738 338 AVLIMGIVG-GAIGPPLIGFLADAFgLRAAFLVpLVCYLLILLLAL 382
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
14-355 1.42e-18

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 86.09  E-value: 1.42e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  14 LLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGlGVGQLLFGP----LSDKIGRKRPLILSLLLFIVSSILC 89
Cdd:cd17330   3 LVVFLDALGFGIVFPVLPFYVREFNKLGASGYYVGLLQSSY-SLGQFLASPlwgrLSDRYGRKPVLLLSLAGSAVSYVLL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  90 ATTNNIYWLVVWRFIQGIAGAGGSVlSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAE 169
Cdd:cd17330  82 GLSRNLWLLFLARFLDGLTGGNVSV-AQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLVAAA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 170 ISTVLLLGCVLFInetlpenkrgssllltgrsvvqnRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:cd17330 161 LALLNLVLVLFFL-----------------------PPLRRLLLVYFLIALAFAGLESVFSLFLKDRFGFSPSQIGLLLA 217
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 250 LNGIGLIIASW-IFSRLARRINAMTLLRGGLIAAIlCALLTVLCAWTQlpiPALVALFFTIAFCSGIGTVG-GAEAMSAV 327
Cdd:cd17330 218 LVGIAGILAQLlLIPRLAKRLGERKLLRLGLLLAI-IGLLLLPFASSV---PLLVLAAAILAFGTGIVFPAlSALLSKSV 293
                       330       340       350
                ....*....|....*....|....*....|
gi 15831120 328 GTQESGTAsalMGMSMFV--FGGIAAPLSG 355
Cdd:cd17330 294 PSKEQGKA---QGIIQSLqsLARIIGPLLA 320
2_A_01_02 TIGR00880
Multidrug resistance protein;
52-185 4.63e-18

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 80.00  E-value: 4.63e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    52 LIGLGVGQLLFGPLS----DKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGV 127
Cdd:TIGR00880   4 LAGYALGQLIYSPLSglltDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 15831120   128 TLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINET 185
Cdd:TIGR00880  84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
57-356 9.27e-17

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 81.49  E-value: 9.27e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSD----KIGRKRPLIL-SLLLFIVSSILCAT------TNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQ 125
Cdd:COG2211  61 ITDPLIGALSDrtrtRWGRRRPWILiGAIPLALSFVLLFTapdlspTGKLIYALVTYLLLGLAYTLVNIPYSALGAELTP 140
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 126 GVTL-TQFFALLMTVNGLAPVLSPVLGGYIVSTFD------WRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSLLLT 198
Cdd:COG2211 141 DYEErTRLSSWRFAFAGLGGLLASVLPPPLVAAFGgdaalgYRLTALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLKES 220
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 199 GRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGG 278
Cdd:COG2211 221 LKALLKNRPFLLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIG 300
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 279 LIAAILCALLTVLCAWTQlpipalVALFFTIAFCSGIGTVGGAEAMSAV------------GTQESGTASALMGMSMFVF 346
Cdd:COG2211 301 LLLAALGLLLLFFLGPGN------LWLLLVLAALAGIGLGAILVLPWAMladvvdydewktGRRREGLYFGIFTFAIKLG 374
                       330
                ....*....|
gi 15831120 347 GGIAAPLSGF 356
Cdd:COG2211 375 QALAGALAGL 384
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
52-166 5.39e-15

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 75.29  E-value: 5.39e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd17502  40 LLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGLMSLAFIIIADLVPPRERGK 119
                        90       100       110
                ....*....|....*....|....*....|....*
gi 15831120 132 FFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWV 166
Cdd:cd17502 120 YQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFYI 154
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
52-314 8.09e-15

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 75.30  E-value: 8.09e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLS----RSIARDKYQG- 126
Cdd:cd17359  46 LLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASALVpmyiAEVAPAEIRGr 125
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 127 -VTLTQffalLMTVNGLAPV------LSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVlfineTLPENKRgsSLLLTG 199
Cdd:cd17359 126 lVSLNQ----LMIVFGQLLAyivnylIANAGGADWLGAEGWRWMLGLEAIPAILFLLGML-----FIPESPR--WLVSKG 194
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 200 RSVVqnrrFMRFCL--IQSFMLAGLFAYIGSSSFvlqKEFGFSP----MQFSLVFGLNGIGLIIASWIFSRLARRinamT 273
Cdd:cd17359 195 KPIL----IIGIGLaiFQQFVGINVIFYYGPEIF---QNAGFSEnaalLQTIGIGVVNVIFTIIAILLVDKVGRK----P 263
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 15831120 274 LLRGGLIAAILCALLTVLCAWT-----QLPIPALVALFFTIAFCSG 314
Cdd:cd17359 264 LLLIGSIGMAISLLLIGTAFYFapgsqASGIVALVLILLFVAFFAM 309
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
52-355 9.58e-15

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 75.09  E-value: 9.58e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIaGAGG-----SVLSRSIARDKYQG 126
Cdd:TIGR00895  62 LIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGL-GLGGlmpnlNALVSEYAPKRFRG 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   127 VTLTQFF---ALLMTVNGLapvlspvLGGYIVSTFDWRTLFWVMAEISTVLLL-------------------GCVLFINE 184
Cdd:TIGR00895 141 TAVGLMFcgyPIGAAVGGF-------LAGWLIPVFGWRSLFYVGGIAPLLLLLllmrflpesidflvskrpeTVRRIVNA 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   185 TLPENKRGSSLLL--------TGRSVVQ-------NRRFMRFCLIQSFMLAGLFAyIGSSSFVLQKEFGFSPMQFSLVFG 249
Cdd:TIGR00895 214 IAPQMQAEAQSALpeqkstqgTKRSVFKalfqgktARITVLLWLLYFMLLVGVYF-LTNWLPKLMVELGFSLSLAATGGA 292
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   250 LNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLtvlcaWTQLPIPALVALFFTIA-FCSGIGTVGGAEAMS-AV 327
Cdd:TIGR00895 293 LFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLV-----GSTLFSPTLLLLLGAIAgFFVNGGQSGLYALMAlFY 367
                         330       340
                  ....*....|....*....|....*...
gi 15831120   328 GTQESGTASALMgMSMFVFGGIAAPLSG 355
Cdd:TIGR00895 368 PTAIRATGVGWA-IGIGRLGAIIGPILA 394
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
51-317 3.09e-14

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 73.02  E-value: 3.09e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA----GAGGSVLSRSIARDKYQG 126
Cdd:cd17316  45 GFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGiggeYPGASTYVAEFAPSKRRG 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 127 VTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAeistvLLLGCVLFInetlpenkRGSSLLLTGrsvvqnr 206
Cdd:cd17316 125 FALGLLQSGWALGALLAALVASLLIPLLSGDWGWRILFLIGA-----LPALLALLL--------RRRTLLLIL------- 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 207 rfmrFCLIQSFMLAGLFAYIGSssfVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCA 286
Cdd:cd17316 185 ----LWFFISFGYYGLTTFLPT---YLQTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILA 257
                       250       260       270
                ....*....|....*....|....*....|.
gi 15831120 287 LLtvLCAWTQLPIPALVALFFTIAFCSGIGT 317
Cdd:cd17316 258 LP--LFYLLSGSPTLLLLLLFILSFFVGGVW 286
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
29-353 1.34e-13

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 71.45  E-value: 1.34e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  29 ALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA 108
Cdd:cd17319  25 AAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVA 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 109 GAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFInetlpe 188
Cdd:cd17319 105 EAGFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLLLAVLWWFYL------ 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 189 nkrgssllltgrsvvqnRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLV----FGLNGIGLIIASWI--- 261
Cdd:cd17319 179 -----------------RQVWGLALGYFGINYALYGLLTWLPTYLKQARGFSLKQVGLLaaipFLAGAIGMILGGRLsdr 241
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 262 FSRLARRINAMTLLRGGLIAAILCALLTVlcawtqlPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGM 341
Cdd:cd17319 242 LLRGARRLVIIIGLLLAAVGLLLAYLTTS-------PVVAVILLSLAGFGIGAASPVFWSLPADLLPGEAAATAGGLINS 314
                       330
                ....*....|..
gi 15831120 342 sMFVFGGIAAPL 353
Cdd:cd17319 315 -GGNLGGFVAPL 325
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
57-310 3.65e-13

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 69.95  E-value: 3.65e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALL 136
Cdd:cd17329  50 VASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLFEPASEAMIADVTTPENRTRAFSLL 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 137 MTVNGLAPVLSPVLGGYIVsTFDWRTLFWVMAEISTVLLLGCVLFINETLP--ENKRGSSLLLTGRSVVQNRRFMRFCLI 214
Cdd:cd17329 130 YWAINLGVAIGPLLGGLLL-LYSFRLLFLAAAVLFLLAALVLLFLLPETRPkrRAAEKTEILRGYKIVLRDRAFLLFLLA 208
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 215 QSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGG-LIAAILCALLTVLCA 293
Cdd:cd17329 209 SFLISLIYFQLESTLPVYVVEILGLGESLLGLLLALNALLIVLLQFPVARLVERFRLRKILMIGiLLFAIGFAVLAFANT 288
                       250
                ....*....|....*..
gi 15831120 294 WTQLpipALVALFFTIA 310
Cdd:cd17329 289 LAVL---ILAMIVLTLG 302
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
51-355 6.50e-13

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 69.15  E-value: 6.50e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIaGAGGSVLS-RSIARDKYQGVTL 129
Cdd:cd17365  43 ALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGL-GLGAAMPNaITLVSEYAPARRR 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 130 TQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAeistVLLLGCVLFInetlpenkrGSSLLLTGrsvvqnrrfm 209
Cdd:cd17365 122 SLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGG----VPPLILLPLL---------RGTLLLWV---------- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 210 rfcliQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLT 289
Cdd:cd17365 179 -----TFFMGLLLVYLLNSWLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFALGAVSLALL 253
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 290 VLcawtqlpIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMS----MFVFGGIAAPLSG 355
Cdd:cd17365 254 GV-------SPASLVLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGwalgVGRLGAILGPLLG 316
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
28-356 2.74e-12

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 67.59  E-value: 2.74e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  28 PALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGI 107
Cdd:COG2807  39 PLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGA 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 108 AGAGGSVLSRSIARDKYQGvTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETlP 187
Cdd:COG2807 119 GIAVGNVLLPGLIKRWFPD-RVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLWLPLLRRR-P 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 188 ENKRGSSLLLTGRSVVQNRRFMRFCL---IQSFMLAGLFAYIGSssfVLQkEFGFSPMQFSLVFGLNGIGLIIASWIFSR 264
Cdd:COG2807 197 AAAAAAPAAASLRSLWRSPLAWLLTLffgLQSLLYYAVVAWLPP---ILR-DAGLSAATAGLLLSLFQLAGIPGSLLVPL 272
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 265 LARRINAMTLLrgGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMF 344
Cdd:COG2807 273 LADRLGDRRPL--LLLLGLLGLAGLLGLLLAPGSLPWLWAVLLGLGQGGLFPLALTLIGLRARTPAEAAALSGMAQSVGY 350
                       330
                ....*....|..
gi 15831120 345 VFGGIAAPLSGF 356
Cdd:COG2807 351 LLAALGPLLVGA 362
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
59-305 3.24e-12

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 67.28  E-value: 3.24e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  59 QLLFGP----LSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIArDKYQGVTLTQFFA 134
Cdd:cd17388  51 QFIFAPilgaLSDRFGRRPVLLLSLAGAALDYLLMAFAPTLWWLYLGRIIAGITGATGAVAAAYIA-DVTPPEQRARNFG 129
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 135 LLMTVNGLAPVLSPVLGGyIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSL---LLTGRSVVQNRRF--M 209
Cdd:cd17388 130 LLGAAFGLGFIAGPALGG-LLGEISPRAPFLVAAGLNGLNFLLGLFVLPESLPPERRRAFRwrrANPFGSLRWLTGFpgL 208
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 210 RFcLIQSFMLAGLFAYIGSSSFVL--QKEFGFSPMQFSLVFGLNGIGLIIA-SWIFSRLARRINAMTLLRGGLIAAILCA 286
Cdd:cd17388 209 LG-LLAVFFLIQLIGQVPATTWVLftEDRFDWSPTMVGLSLAVFGLLHALFqAFVTGPIAKRLGEKRAILLGLAADALGF 287
                       250       260
                ....*....|....*....|.
gi 15831120 287 LLTVLC--AWTQLPIPALVAL 305
Cdd:cd17388 288 LLLAFAtqGWMVFPILILLAL 308
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
52-317 4.02e-12

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 66.94  E-value: 4.02e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG----GSVLSRSIARDKYQGV 127
Cdd:cd17371  44 LAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGLGFGGewaaGAALMAEYVPARHRGK 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 128 TLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVlllgcVLFINETLPE--------NKRGSSLLLTG 199
Cdd:cd17371 124 ALGYVQSGWAVGWLLATLLAALLFPLLPPEIAWRVLFLLGALPALL-----VLFIRRFVKEppqwqaarAARRHFADRPS 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 200 RSVVQNRRFMRFCLIQSFMLAG-LFAYIGSSSFV---LQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLL 275
Cdd:cd17371 199 LRELFSPPLLRTTLLASLLATGaLGGYYGITTWLpsyLTGERGLSFEGSAGYLVVTILGGFLGYLAGGFLADRIGRRNNF 278
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 15831120 276 RGGLIAAILCALLTVL--CAWTQLPIPALVALFFTIAFCSGIGT 317
Cdd:cd17371 279 ALFALGSAISILLYFFlpLSPTLILILGFPLGFFASGPFSGMGA 322
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
59-267 1.03e-11

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 66.00  E-value: 1.03e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   59 QLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALLMT 138
Cdd:PRK15403  68 QWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITS 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  139 VNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRG---SSLLLTGRSVVQNRRFMRFCLIQ 215
Cdd:PRK15403 148 IVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPfsaKSVLRDFRNVFRNRLFLTGAATL 227
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120  216 SFMLAGLFAYIGSSSFVLQKEFGFSPMQFSL----VFGlngiGLIIASWIFSRLAR 267
Cdd:PRK15403 228 SLSYIPMMSWVAVSPVILIDAGGMTTSQFAWtqvpVFG----AVIVANAIVARFVK 279
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
53-356 1.47e-11

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 65.31  E-value: 1.47e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQF 132
Cdd:cd17489  42 LAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATLVADIIPPSRRGEG 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 133 FALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEIStVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRFC 212
Cdd:cd17489 122 IGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLA-LLALLLVFLVKDPPPVAAEEAEAGTRAFRRLVEKKVLPPA 200
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 213 LIqsfMLAGLFAYIGSSSFV--LQKEFGFSpmQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIaaILCALLTV 290
Cdd:cd17489 201 LI---LFLASIAYGAISTFLplYAAERGIS--NAGLFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLL--LLALGLLL 273
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 291 LCAWTQLPIPALVALFFTIAFCSGIGTVgGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGF 356
Cdd:cd17489 274 LSFAGSPWMLLLAAVLYGLGFGLLFPAL-QALAVDLVPPHRRGAANGTFFIFFDLGIGLGGLLLGL 338
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
51-185 3.46e-11

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 64.13  E-value: 3.46e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLG--VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGS----VLSRSIARDKY 124
Cdd:cd17358  48 SLLTLGalIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASvvvpVYIAEIAPKNV 127
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15831120 125 QGvTLTQFFALLMTVNglapvlspVLGGYIVSTF-DWRTLFWVmAEISTVLLLGCVLFINET 185
Cdd:cd17358 128 RG-ALGSLNQLLVNIG--------ILLGYVLGSFlPWRTLALI-GAIPPVVFLILLFFIPES 179
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
57-383 4.18e-11

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 63.79  E-value: 4.18e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVW-----RFIQGIAGAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd06173  49 LFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLALLGSLSLWlllvlAFLLGIASAFFGPARQALLPELVPKEQLVR 128
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 132 FFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAeISTVLLLGCVLFINETLPENKRGSSLLLT------GRSVVQN 205
Cdd:cd06173 129 ANALNSLATQLARIIGPALGGLLVALLGPGGAFAINA-LSFLLSALLLLFIRRPPPAAPGESSSLLLrdlregLRYLRRS 207
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 206 RRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINamtLLRGGLIAAILC 285
Cdd:cd06173 208 PLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRR---RGRLLLIGALLL 284
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 286 ALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGGETL-LKM 364
Cdd:cd06173 285 GLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALgLSA 364
                       330
                ....*....|....*....
gi 15831120 365 SLAITVCYTLAFLVALTRI 383
Cdd:cd06173 365 VFLLAGALLLLAALLLLLL 383
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
53-376 5.52e-11

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 63.35  E-value: 5.52e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRS----IARDKYQGvt 128
Cdd:cd17477  42 LGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESwlnaLATNENRG-- 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 129 ltQFFALLMTVNGLAPVLSPVLGGyIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSLLLTGRSvvqnrrf 208
Cdd:cd17477 120 --RVLGLYSTVLGLGFALGPLLLA-LVGTAGALPFLIAAVLLLLALVPLLLTRRAAPEIEEAESISLRRLLRI------- 189
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 209 MRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALL 288
Cdd:cd17477 190 APLALLGAFVAGFLEGAFYSLLPLYGLRLGLSVAQAALLLAAFVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALL 269
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 289 TVLcaWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMsMFVFGGIAAPLSG------FGGETLL 362
Cdd:cd17477 270 LPL--VPGLPLALLVLLFLWGGAAGPLYTLALALAGDRLPGDELVAANAALLL-LYGLGSVIGPLLAgalmdaFGPHGLF 346
                       330
                ....*....|....
gi 15831120 363 KMSLAITVCYTLAF 376
Cdd:cd17477 347 LFLAAVALLFLLFL 360
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
51-354 1.44e-10

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 62.18  E-value: 1.44e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLfGPLSDKIG-RKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIqgIAGAGGSV------LSRSIArDK 123
Cdd:cd17471  42 ALSGIVVSQWL-GRLSDRGGdRKPLILLALLAGALGYLLFAFLRNYWVLLLVGVV--LLSLGAAAfpqlfaLAREYA-DR 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 124 YQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGcVLFINETLPENKRGSSLLLTGRSVV 203
Cdd:cd17471 118 SSGRDATLFNSVLRAAFSLAWVIGPPLAFLLLDVLGFTGLFLLAALLYLVVALL-VLFLLPSVKPPAQKATPASSLVKAP 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 204 QNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAI 283
Cdd:cd17471 197 VNRRLLLLFAAFTLLFAANSMYIIAMPLYVTNELGGSESWVGLLFGLAAALEIPIMLLAGLLAKRFGKRRLLLAGFLAGV 276
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 284 L-CALLTVLCAWTQLpIPALVALFFTIAFCSGIGTVGGAEAMsavgTQESGTASAL--------MGMSMFVFGGIAAPLS 354
Cdd:cd17471 277 LfYLGLALATSLWQL-IALQLLNAIFIGITAGLGISYFQDLM----PGQPGLATTLysnasrigSLLGGLLAGVIAQYFG 351
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
52-191 1.99e-10

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 62.01  E-value: 1.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKY---QGVT 128
Cdd:TIGR00711  47 MLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYppeKRGR 126
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15831120   129 LTQFFALLMTVnglAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKR 191
Cdd:TIGR00711 127 AMAIWGLTVLV---APALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASE 186
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
52-353 3.32e-09

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 58.02  E-value: 3.32e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd17328  44 IISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADLFPKEKRTR 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 132 FFALLMTVNGLAPVLSPVLGGYIVS-TFDWRTLFWVMAeistVLLLGCVLFINETLPENKRG------------SSLLLT 198
Cdd:cd17328 124 ALGVFYFAIPLGSGLGYVVGGLVAQaTGGWRWAFRVTG----VLGVLLAILLLLFVREPPRGaaeggvmakstaTSFLAD 199
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 199 GRSVVQNRRFMRFCL---IQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGL-NGIGLIIASWIFSRLARRINAMT- 273
Cdd:cd17328 200 LKALAKNPSFILSTLgftAVSFVTGALAFWAPTFFLRAFGVGDLSSADVGLIFGAiTCIAGVLGVLLGGILADRLRRKTp 279
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 274 -----LLRGGLIAAILCALLTVLCAWTQlPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGG 348
Cdd:cd17328 280 radplVCAVGLLAAAPFLFLALVLALSN-LLLAWVLLFLGEFLLSLNWAPVFAILLYVVIPTRRSTASAIQILLSHLLGD 358

                ....*
gi 15831120 349 IAAPL 353
Cdd:cd17328 359 AGSPY 363
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
21-381 9.52e-09

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 56.41  E-value: 9.52e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  21 MCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:cd17478  10 FYQGFLPALLPLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAG----GSVLSRSIARDKyqgvtLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLL 176
Cdd:cd17478  90 LVALAGIGSAAfhpeGARLASQAAGGR-----RGLAMSIFSVGGNLGFALGPLIAAALVALFGGLGLLILLIIPGLAVAL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 177 GCVLFINETLPENKRGSSLLLTGRSVVQNRRFMR----FCLIQSFMLAGLFAYIGsssfVLQKEFGFSPMQFSLVFGLNG 252
Cdd:cd17478 165 LLLRLRPLKKPEAKKAAAKSSARSTLKGVWRALLllliIVFLRSWVLSSLTTFLP----FYLVQRGYSLVFAGLLLSLFL 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 253 IGLIIASWIFSRLARRINAMTLLRGGLIAAilcALLTVLCAWTQLP--IPALVALFFTIAFCSGIGTVGGAEAMSavgtQ 330
Cdd:cd17478 241 FAGAIGTLIGGPLSDRFGRRRVIIASLLLA---APFLLLFLLTPGIwsYILLVLAGFLLFASFPVTVVLAQELLP----G 313
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 15831120 331 ESGTASALMGMSMFVFGGIAAPLSGFGGETLLkMSLAITVCYTLAFLVALT 381
Cdd:cd17478 314 NVGLASGLMMGLSFGLGGIGAPVLGALADAFG-LESVLLILALLPLLGALL 363
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
56-317 1.85e-08

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 55.69  E-value: 1.85e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  56 GVGQLLF----GPLSDKIGRKRPLILSLLLF-IVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIArDKYQGVTLT 130
Cdd:cd17490  41 GISQMLLriplGILSDRIGKRKLFIIIGLLFtVLASLIMILFPSPWGLLIARFLSGIAAATWVSFTVLYA-SYFPPDEAA 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 131 QFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWvMAEISTVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMR 210
Cdd:cd17490 120 KAMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPFL-LAALAGVLGFILSLFIKEERREKKPVLTELKELLSVLKDKKLLF 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 211 FCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLV----FGLNGIGLIIASWIFSRLARRINAMTLlrGGLIAAILCA 286
Cdd:cd17490 199 FSLLAILQQMITFSTTFGFTPLIAKQLGASSFQLGLLsiiyLLPNALASLLSGTLFYKKLGERNTIII--GFLLLGAYCF 276
                       250       260       270
                ....*....|....*....|....*....|.
gi 15831120 287 LLTVlcawtqlpIPALVALFFTIAfCSGIGT 317
Cdd:cd17490 277 LIPF--------APNLTLLYLLQA-LNGFGT 298
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
54-318 2.08e-08

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 55.35  E-value: 2.08e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  54 GLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLS----RSIARDKYQGvtl 129
Cdd:cd17360  47 GAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGIASMTVplyiAEAAPPRIRG--- 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 130 tqffaLLMTVNGLA----PVLSPVLGGYIVSTFD-WRTLFWVMAeISTVLLLGCVLFINET--LPENKRGsslLLTGrsv 202
Cdd:cd17360 124 -----RLVTINVLFitggQFVAYVINGAFSYLPGgWRWMLGLAA-VPAVLQFIGLLFLPESprWPSTRRA---LIVG--- 191
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 203 vqnrrfmrfCLIQSF-MLAGLFAYIGSSSFVLQKeFGFSPMQFSL-----VFGLNGIGLIIASWIFSRLARRINAMTLLR 276
Cdd:cd17360 192 ---------CGLQAFqQFSGINTVMYYSATILQM-AGFKDNQNAIwlsliVAGTNFIFTIVGMYLIDKFGRRKLLLISLF 261
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 15831120 277 GGLIAAILCALLTVLcawtqlpipALVALFFtIAFCSGIGTV 318
Cdd:cd17360 262 GVIVALVVLAVWLAL---------VGLILYL-AFFAPGMGPV 293
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
57-356 3.00e-08

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 54.92  E-value: 3.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWR----FIQGIAGAGGSVLSRSIARDKyqgvtlTQF 132
Cdd:cd17331  50 VGGPLFGRFGDLFGPRAALVLSFLSSALSYLLLAFASSVPMLFLSRlpsvFMHAMQAAQMVVTDLTDPGER------AAA 123
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 133 FALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFI---NETLPENKRGSS-------LLLTGRSV 202
Cdd:cd17331 124 LGRLGLSYGIGMVVGSFLGGLLTKKFGEQAAALVAAVGSLLSIVLVILLIpsnTKSKREKEAKESasppsvfNLKEILRL 203
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 203 VQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIA-SWIFSRLARRINAMTLLRGGLIA 281
Cdd:cd17331 204 LRLPGVAFLLLVKLLSGLPIGMFQSMFSLVAMDFFGLTPEENGYLMSYAGVLGMVVqGLLVGPLTKRFGERSLLKLSVAL 283
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15831120 282 AILCALLtvLCAWTQLPIPALVALFFTIAFCSgIGTVGGAEAMSAVGTQESGTASALmGMSMFVFGGIAAPLSGF 356
Cdd:cd17331 284 LAIGYLL--LAFVTTVWQLLVLLLPLVIGGSV-LYTVITSLLTKAVPPEDTGTALGL-SHALFSLVRTVSPTIGG 354
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
28-378 5.54e-08

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 54.20  E-value: 5.54e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  28 PALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGI 107
Cdd:cd17312  24 VAKPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGL 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 108 A-GAGGSVLSRSIAR---DKYQGVtltqFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFIN 183
Cdd:cd17312 104 FqSMGWPPCVKLLGNwfsKKERGT----VYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGIVGLVVAIILFFFLR 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 184 ETLPenkrgssllltgrsvvqnrrfmrfcLIQSFMLAGLFAYIGSSSFV------LQKEFGFSPMQFSLVFGLNG----I 253
Cdd:cd17312 180 DSPP-------------------------YVWVLSLAYAFVYIVRYACLdwgplyLYEVKGYSLIDAGWFSSLYEvggiA 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 254 GLIIASWIFSRLARRinamtllRGGLIAAILCALLTVLCA---WTQLPIPALVALFFTIAFCSG--IGTVGGAEAMSAVG 328
Cdd:cd17312 235 GTILAGLLSDKLFGG-------RRAPIAVIYMLLMTLSLAlfwFFPHNKLLSIVLLFLIGFFVGgpINLIGGAAAQDIGR 307
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*
gi 15831120 329 TQESGTASALMGMSMFVFGGIAAPLSG-----FGGETLLKMSLAITVCYTLAFLV 378
Cdd:cd17312 308 KEAAGTATGFVGLFGYLGASLAGLPLGyiidhYGWSTVFYFLISAALLSVLLLLS 362
Sugar_tr pfam00083
Sugar (and other) transporter;
13-185 5.58e-08

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 54.59  E-value: 5.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    13 GLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCAT- 91
Cdd:pfam00083  17 GVIGAFLTLIDFFKNFGLSKSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAa 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    92 --TNNIYWLVVWRFIQGIAGAGGSVLSRS----IARDKYQGvTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFW 165
Cdd:pfam00083  97 kgKWSVYQLIVGRVLVGIGVGGASVLAPMyiseIAPKKLRG-ALGSLYQLAITFGILLAYIFGLGLNKTSNSDGWRIPLG 175
                         170       180
                  ....*....|....*....|
gi 15831120   166 VMAeISTVLLLGCVLFINET 185
Cdd:pfam00083 176 LQL-VPALLLIIGLLFLPES 194
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
52-168 1.05e-07

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 53.06  E-value: 1.05e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKyqgvTLTQ 131
Cdd:cd17374  45 MAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEW----TTPR 120
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 15831120 132 FFALLMTVNGLA-PVLSPVLGGYIVSTFDWRTLFWVMA 168
Cdd:cd17374 121 HRALAITLTSCFfSIGQMLLAGLAYAIRDWRLLQLVVS 158
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
51-314 1.69e-07

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 52.58  E-value: 1.69e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRS----IARDKYQG 126
Cdd:cd17315  43 LLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLGVGLASVLVPLyiseIAPAKIRG 122
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 127 VTLTqfFALLMTVNGLapVLSPVLGGYIVSTF-DWRTLFWVMAEISTVLLLGCVLFINETLPenkrgsslLLTGrsvvqn 205
Cdd:cd17315 123 ALGT--LNQLMITFGI--LLAYLLGLALSLSPpGWWRLMFALAAVPALLQLLLMFFLPESRA--------LLVG------ 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 206 rrfmrfCLIQSFM-LAGLFAYIGSSSFVLQKEFGF-SPMQFSLVFGL-NGIGLIIASWIFSRLARRinamTLLRGGLIAA 282
Cdd:cd17315 185 ------VGLQLLQqLTGINAVMYYAPTIFKSAGGGtASILASIIVGVvNLLATLVAIRLVDKVGRR----PLLLIGFAGM 254
                       250       260       270
                ....*....|....*....|....*....|....
gi 15831120 283 ILCALLTVLCAWTQLPIPAL--VALFFTIAFCSG 314
Cdd:cd17315 255 AASLLLLAIAFLLPALAKAAgwLALLGILLYIAA 288
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
52-181 2.43e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 52.63  E-value: 2.43e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIaGAGGSVLSRSIARD----KYQGV 127
Cdd:cd06179  42 SLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGI-GAGTQGLGAAVASElvpnKYRGL 120
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 15831120 128 TLTQFFALLMTVNGLAPVLSPVLGGYIVSTfdWRTLFWVMAEISTVLLLGCVLF 181
Cdd:cd06179 121 VQGVVNLVASPGSALGPLIAGALVEANAAG--WRWIFYINAIFNALALILLFFF 172
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
51-120 3.49e-07

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 51.89  E-value: 3.49e-07
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCAT------TNNIYWLVVWRFIQGIAGAGGSVLSRSIA 120
Cdd:cd17364  48 ALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMIIGTILSALspgstpLGVMGWLIFFRFLLGIGIGGDYPLSATIM 123
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
57-182 1.01e-06

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 50.27  E-value: 1.01e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFALL 136
Cdd:cd17325 250 LSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLF 329
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 15831120 137 MTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFI 182
Cdd:cd17325 330 NTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
53-114 1.32e-06

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 50.01  E-value: 1.32e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15831120    53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSV 114
Cdd:TIGR00898 138 VGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWV 199
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
52-185 1.43e-06

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 49.87  E-value: 1.43e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGR--KRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTL 129
Cdd:COG2271 226 FLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKAR 305
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 130 TQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINET 185
Cdd:COG2271 306 GTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAALALLAALLALLLLRET 361
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
53-351 2.79e-06

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 48.77  E-value: 2.79e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG-GSVLSRSIAR---DKYQGvt 128
Cdd:cd17475  42 LGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSvQPGGGRAIMRwfpPRERG-- 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 129 ltqfFALLMTVNG--LAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPEN---KRGSSLLLTGRSVV 203
Cdd:cd17475 120 ----LAMGIRQTGvpLGGALAAALLPPLALHYGWRAAFVVAGLVSILAAVLFWLFYREPPAASaatESASTLLRSLKEVL 195
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 204 QNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQ----FSLVFGLNGIGLIIASWIFSRLARRiNAMTLLRGGL 279
Cdd:cd17475 196 RNRDVWLIAIAGALLVAPQFALLTFLLLFLHDHLGLSVVAagalLAVAQLGGALGRIGLGRVSDRVFGG-RRRPVLVITA 274
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15831120 280 IAAILCALLTVLCAWtQLPIPALVALFFTI-AFCSGIGTVGGAEAMSAVGTQESGTASALMGmsMFVFGGIAA 351
Cdd:cd17475 275 AIAAAALLVLSLLSP-GTPLWLLVLLLILLgLFAIGWNGLYLTLVAESAGPEQAGTALGLAN--TINFIGIAI 344
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
51-135 3.12e-06

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 48.96  E-value: 3.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCAT------TNNIYWLVVWRFIQGIAGAGGSVLSRSI----A 120
Cdd:TIGR00887  65 ASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLspgsspKSVMATLCFWRFWLGVGIGGDYPLSAIItsefA 144
                          90
                  ....*....|....*
gi 15831120   121 RDKYQGVTLTQFFAL 135
Cdd:TIGR00887 145 TKKWRGAMMAAVFAM 159
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
21-380 3.88e-06

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 48.47  E-value: 3.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  21 MCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVV 100
Cdd:cd17333  10 LTDALLGILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 101 WRFIQGIAGAGGSVLSRSIARDKYQGvTLTQFFALLMTVNGLAPVLSPVLGGYIVST-FDWRTLFWVMAeiSTVLLLGCV 179
Cdd:cd17333  90 LMFLAGLGAGILDTGANTFVGALFEE-SSATRLNVLHGFFGLGALIGPLIATSLLTSeLSWSWAYLIIG--LIYLLLAIL 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 180 LFINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFV------LQKEFGFSPMQFSLVFGLNGI 253
Cdd:cd17333 167 ILLTLFPELPSARNPQQSVGAFSASASRLLRNPSIILGALALFLYVGAETAFSswvpsyLVEKKHVSDGLAGYLLSGFWV 246
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 254 GLIIASWIFSRLARRINAMTLLRGGLIAAIlcaLLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGtQESG 333
Cdd:cd17333 247 GITIGRLLGGPISRRIKPHTLLVLSGSGAL---LGLLILLLAPTLVVGLVATALLGLFMAALFPTILSLGISNLP-YAKG 322
                       330       340       350       360
                ....*....|....*....|....*....|....*....|....*....
gi 15831120 334 TASALMGMSMFVFGGIAAPLSGFGGE--TLLKMSLAITVCYTLAFLVAL 380
Cdd:cd17333 323 KGTSVLLAAGSIGGAIIPFIMGFIAEavGIQTAMLLITILYAIIFVLAL 371
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
56-173 7.13e-06

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 47.60  E-value: 7.13e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  56 GVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWL-VVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFA 134
Cdd:cd17353 263 GGGRPFWGWLSDKIGRKNTLSIAFLIQGVAMFLLPFIGSVAVLfVLGVALIGFCYGGGFALFPALTADFFGTKNAGTNYG 342
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 15831120 135 LLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTV 173
Cdd:cd17353 343 LLYTAKGVGGLIGPIIAAYVLYTGGYNAAFIIAAALSLV 381
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
56-356 1.04e-05

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 46.84  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  56 GVGQLLFGP----LSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGaGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd17390  41 GALQLFSSPlvgsWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRIPLGIFK-HTQSLCKAYLSDLVSEQERSR 119
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 132 FFALLMTVNGLAPVLSPVLGGYIVstfDWRTLFWVMAEISTVLLLGCVLFINETLPenKRGSSLLLtgrsvvqnrrfmRF 211
Cdd:cd17390 120 VLGRFNAASSLGFILGPVVGGHLA---ETDGGFYYVALLCSAIFILNAGLVWFLLS--KLWDLLLV------------RF 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 212 CLIQSFMLaglfaYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRgGLIAAILCALLTVL 291
Cdd:cd17390 183 LMGFSVLL-----FRSNFSLYLEERFDLSPKTIGYLISYSGVLGALSGFLVGRILKLYKNNEYLL-LLHSFILLALSLLG 256
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15831120 292 CAWTQlPIPALVALFFTIAFCSGIGTVGGAEAM-SAVGTQESGTasaLMGMSMFV--FGGIAAP-LSGF 356
Cdd:cd17390 257 LALAP-SIWLLVLCLTPLSISSAVLRTCSTSLLlSRGKSKERGT---LLGVGQSVtsLARILAPlLSGL 321
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
53-146 1.99e-05

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 46.19  E-value: 1.99e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG----GSVLSRSIARDKYQ--- 125
Cdd:cd17379  44 LGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGKGgwmtGYVLVTEFVGSKYRrtv 123
                        90       100
                ....*....|....*....|..
gi 15831120 126 GVTLTQFFAL-LMTVNGLAPVL 146
Cdd:cd17379 124 GIVYQMFFTLgLLILPGIAYFI 145
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
29-353 2.42e-05

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 45.83  E-value: 2.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    29 ALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA 108
Cdd:TIGR00881  17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   109 GAGGSVLSRSIARDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTF-DWRTLFWVMAEISTVLLLGCVLFINET-- 185
Cdd:TIGR00881  97 QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELySWHWVFIVPGIIAIIVSLICFLLLRDSpq 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   186 ---LP----------------ENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQ--- 243
Cdd:TIGR00881 177 scgLPpaeempneepdgdaekKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKasw 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   244 FSLVFGLNGI-GLIIASWIFSRLARRINAMTLLrgGLIAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAE 322
Cdd:TIGR00881 257 AFTLYELGGLvGTLLAGWLSDKLFNGRRGPLAV--FFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVI 334
                         330       340       350
                  ....*....|....*....|....*....|.
gi 15831120   323 AMSAVGTQESGTASALMGMsMFVFGGIAAPL 353
Cdd:TIGR00881 335 ASELAPKKAAGTAAGFVGF-FAYLGGILAGL 364
PRK03893 PRK03893
putative sialic acid transporter; Provisional
58-166 2.47e-05

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 46.23  E-value: 2.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   58 GQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG--GSVLSRSIA------RDKYQGVTL 129
Cdd:PRK03893  71 GGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGeyGSSATYVIEswpkhlRNKASGFLI 150
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 15831120  130 TQFfallmtvnGLAPVLSPVLGGYIVSTFDWRTLFWV 166
Cdd:PRK03893 151 SGF--------SIGAVVAAQVYSLVVPVWGWRALFFI 179
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
51-320 2.64e-05

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 45.72  E-value: 2.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIaGAGGSV-----LSRSIARDKYQ 125
Cdd:PRK11551  59 GILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV-GLGGALpnliaLTSEAVGPRLR 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  126 GVTLTQFFALLMTVNGLAPVLSPVLGGyivsTFDWRTLFWV--MAEISTVLLLgcVLFINET---LPENKRGSSLLLTGR 200
Cdd:PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAG----DAAWRHIFYVggVGPLLLVPLL--MRWLPESrafAQAAGAGKQRAPVLR 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  201 SVVQNRRFMR-FCLIQSFMLAGLFAYIGSS---SFVLQKefGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINaMTLLR 276
Cdd:PRK11551 212 ALFGEGRATAtLLLWISYFFTLIVLYFLLNwlpSLLVGQ--GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLR-PRRVV 288
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 15831120  277 GGLIAAILCALLTVLCAWTqlpipalVALFFTIAFCSGIGTVGG 320
Cdd:PRK11551 289 LLIYAGILASLAALAAAPS-------FAGMLLAGFAAGLFVVGG 325
PRK12307 PRK12307
MFS transporter;
51-213 3.17e-05

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 45.69  E-value: 3.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLT 130
Cdd:PRK12307  62 AFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKS 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  131 QFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVmaEISTVLLlgcVLFINETLPENKRGSSLLLTGRSVVQNRRFMR 210
Cdd:PRK12307 142 KASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV--GLLPVLL---VIYIRARAPESKEWEEAKLSGKGKHSQSAWSV 216

                 ...
gi 15831120  211 FCL 213
Cdd:PRK12307 217 FSL 219
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
52-182 3.71e-05

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 45.26  E-value: 3.71e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  52 LIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG----GSVLSRSIARDKYQ-- 125
Cdd:cd17317  35 FLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGiftvGFVLGMEIVGPKYRsf 114
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15831120 126 -GVTLTQFFALLMtvnglapVLSPVLGGYIVstfDWRTLFWVMAeISTVLLLGCVLFI 182
Cdd:cd17317 115 vGILFGLFWALGY-------MLLALLAYLIR---DWRWLQLAIS-LPGLLFLLLLWWL 161
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
60-288 3.94e-05

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 45.23  E-value: 3.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIG-RKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAggsvlSRSIARDK-----YQGVTLTQFF 133
Cdd:cd17370  52 LFSGYLSDRTGkRKPLVILGYGLSALAKPLLALAGSWQLVLLLRILERLGKG-----IRTPPRDAlladaTPPSGRGKAF 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 134 ALLMTVNGLAPVLSP--VLGGYIVSTFDWRTLFWVMAeISTVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRF 211
Cdd:cd17370 127 GLHRALDTLGAVLGPllAALLLYLLGGNYRTIFLLAA-IPALLALLILLFVVKEYPRPPKLRKKSKKTSLKKLPKAFWLY 205
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15831120 212 CLIQSFMLAGLFAYIGsssFVLQ-KEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALL 288
Cdd:cd17370 206 LLAVALFALGNFSFAF---LILRaQELGLSAALIPLLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLG 280
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
51-358 5.21e-05

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 44.95  E-value: 5.21e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSR-----SIARDKYQ 125
Cdd:cd17355  47 GLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLLWGLLGGGGAGTLAAVAfatvaAWWFERRR 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 126 GVTLTqffaLLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLF-------INETLPENKRGSSLLLT 198
Cdd:cd17355 127 GLALG----ILTAGGGLGSLVFLPLGAALIEAFGWRTALLVLALLALLVLVPVLLLlrrrpadLALRAYDDASPASPGST 202
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 199 GRSVVQNRRFMRF-------CLIQSFMLAGLFAYIGsssfvlqkEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINA 271
Cdd:cd17355 203 LKEALRSASFWLLalafflcGFAVVGLIVHLVPYLA--------DRGISPAAAAVALALIGLFNIVGRLLSGWLGDRYSP 274
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 272 MTLLrggliAAILCALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMsMFVFGGIAA 351
Cdd:cd17355 275 RRLL-----AASYALRALGLALLLLLPFPPLALLLFAALFGLGWGATVPLTAALAARYFGARSYGTLFGL-VFAPHQLGS 348

                ....*..
gi 15831120 352 PLSGFGG 358
Cdd:cd17355 349 ALGPWLG 355
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
61-346 6.12e-05

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 44.99  E-value: 6.12e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    61 LFGPLSDK----IGRKRPLIL-SLLLFIVSSILCATTNNIY------WLVVWRFIQGIAGAGGSVLSRS----IARDKYQ 125
Cdd:pfam13347  52 IVGHIIDRtrtrWGRRRPWLLlSAIILAVSFILLFTPPELGraplfiWLLATYILLRIAYTFFEIPYWSlgpeLTRDYDE 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   126 GVTLTQFFALLMTVNGLAP-VLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLF-----------INETLPENKRGS 193
Cdd:pfam13347 132 RTSLTSYRSFFSVGGGLLAaALAFPLVLILGGTGLERKGYRIFALIGAVLMLLGVIItaagtkervsmRSKEDTGQKEAG 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   194 SLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGfSPMQFSLVFGLNGIGLIIASWIFSRLARRI-NAM 272
Cdd:pfam13347 212 SLLDMLKEVFRNRAFLILLASFLLAALAMGVLNGLLLYYFRYVLG-NGFAASAFPLVFTIGALLGIPLWPPLAKRIgKKN 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   273 TLLRGGLIAAILCALLTVLCAWTqlpipalVALFFTIAFCSGIGTVGGAEAMSA-------VGTQESGTASALMGMSMFV 345
Cdd:pfam13347 291 TYILGALITIAGFALALLLGPNN-------TLLFLVLYIIIGFGYGSSFFLPWSmladvvdYGELRTGKRREGTFFAMWS 363

                  .
gi 15831120   346 F 346
Cdd:pfam13347 364 F 364
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
51-380 8.04e-05

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 44.16  E-value: 8.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYW-LVVWRFIQGIAGAGGSVLSRSIAR---DKYQG 126
Cdd:cd17341  43 PVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALALAVSSYWgLLVLGFLLGFAGANFASGQPWASFwfpKEKIG 122
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 127 VTLTQFFALLMTVNGLAPVLSPVLGGYIV---STFDWRTLFWVMAEISTVLLLGCVLFINETLPENKRGSSLLLTGRSVV 203
Cdd:cd17341 123 GAAGGIAGAGNMGVAVSQLLAPLIAGAIVfdgGFVGWRNAFFVPGILLAIAAVLVLLFGDDLPTGKASALEFLKVQLAVL 202
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 204 QNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAI 283
Cdd:cd17341 203 KNYRTWILSLLYGVTFGSFVGFSNVLPTYFKTRFGLPLVTAGILAALFPLAGALARPAGGWLSDRFGGRRRLWWLFIVMT 282
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 284 LCAlltVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEA----MSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGGE 359
Cdd:cd17341 283 IGA---ALLSLSLPTSGTNLVLFLALFVALGLGAGAGNGSvfrmVPFIFRRELGAVTGLVGAIGGLGGFFLPLLFGSSAL 359
                       330       340
                ....*....|....*....|.
gi 15831120 360 TLLKMSLAITVCYTLAFLVAL 380
Cdd:cd17341 360 MTGSGVGAFSLFGVLAVACTL 380
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
53-116 1.77e-04

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 43.39  E-value: 1.77e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL-CATTNNIYWLVVWRFIQGIAGAGGSVLS 116
Cdd:cd17356  56 LGSFFGALISSFLSDRIGRKKSIQIGCVIYIIGAIIqVAAIGKWYQLIVGRIIAGLGVGFASVLV 120
MFS_SLC37A4 cd17343
Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute ...
56-380 2.07e-04

Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 37 member 4 (SLC37A4), one of four SLC37 family proteins in vertebrates, is better known as glucose-6-phosphate transporter (G6PT). It is also called sugar phosphate exchanger 4 (SPX4), G6P translocase, or transformation-related gene 19 protein (TRG-19). G6PT is a phosphate (Pi)-linked G6P antiporter, catalyzing G6P:Pi and Pi:Pi exchanges. Deficiencies in human G6PT lead to glycogen storage disease type Ib (GSD-Ib), which is a metabolic and immune disorder. G6PT is a member of the Organophosphate:Pi antiporter (OPA)/SLC37 family, whose members are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340901 [Multi-domain]  Cd Length: 409  Bit Score: 43.09  E-value: 2.07e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  56 GVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQFFAL 135
Cdd:cd17343  52 AISKFIGGVLSDQISARWLFSSGLVLSGLTTVAFSGSSSVWVFSILWFLNGLAQGLGWPPCAKILRKWFSPSQFGTWWSV 131
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 136 LMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFI----------NETLPENKRGSSLLLTGRSVVQN 205
Cdd:cd17343 132 LSTSMNLAGSLGPILATLLALSYGWRSTLSISGTVAVVMSVVCLLFIknepsdvglnNIEEEESKGKKKKSPRGESTLKE 211
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 206 RRFMRFCLIQSFMLAGLF----AYIGSSSFVLQKEFGFSPMQFSLV---FGLNG-IGLIIASWIFSRLARRINA------ 271
Cdd:cd17343 212 LLLSPFLWLLSLGYLVVFgvktAVTDWGQLFLIQDKGQSALTGSSFmssLEVGGfVGSIAAGYLSDWAVAKHGSssrgnp 291
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 272 -MTLLRggLIAAILCALLTVLCAW--TQLPIPALVALFFTIAFCS-GIGTVGGAEAMSAVGTQESGTASALMGMSMFVFG 347
Cdd:cd17343 292 rMPLAL--VFMAGLTVSLHLFRVHitSDSSELFILLLGFLIGFSLyGPIAIFGVIANESAPSHLCGTSHAIVALAANVGG 369
                       330       340       350
                ....*....|....*....|....*....|....
gi 15831120 348 GIAA-PLSGFGGETLLKMSLAITVCYTLAFLVAL 380
Cdd:cd17343 370 VLAGlPFSYIAKHYDWRTAFLLLEILCAITVVIL 403
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
54-111 2.07e-04

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 42.79  E-value: 2.07e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15831120  54 GLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG 111
Cdd:cd17446  45 GVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCAAFSPSFPIYCVFRFLTGMALSG 102
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
61-355 2.49e-04

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 42.64  E-value: 2.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  61 LFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAG---AGGSVLSRSIARDKYQGVTLtqffALLM 137
Cdd:cd17391  55 IWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQLLILRLLQGVFSgyvPNATALIASQTPKEKSGWAL----GTLS 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 138 TVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINET-LPENKRGSSLLLTGRSVVQNRRfmrfcLIQS 216
Cdd:cd17391 131 TGVVAGTLIGPLLGGFLADLFGIRNVFFITGGLLFLAFLLTLFFVKEDfKPVEKKKMVSTKEVWNSVPNPS-----LLIS 205
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 217 FMLAGLFAYIGSSS-------FVLQKEFGFSPMQF--SLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAilcAL 287
Cdd:cd17391 206 LFVTTFIIQLANQSiepiltlYIRQLMGDASNLAFisGLVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLAS---AL 282
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15831120 288 LTVLCAWTQLPIpALVALFFTIAFCSGiGTVGGAEAMSAVGTQESGTASAL-MGMSMFVFGGIAAPLSG 355
Cdd:cd17391 283 LYIPQAFVQTPW-QLGILRFLLGLATG-GLLPAINSLLAKITPKEVAGRIFgYNQSFQYLGNVAGPLLG 349
PRK10504 PRK10504
putative transporter; Provisional
63-164 2.79e-04

putative transporter; Provisional


Pssm-ID: 182502 [Multi-domain]  Cd Length: 471  Bit Score: 42.80  E-value: 2.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   63 GPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGA-----GGSVLSRSIARDKYQGVTltqffaLLM 137
Cdd:PRK10504  66 GWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAmmvpvGRLTVMKIVPREQYMAAM------TFV 139
                         90       100
                 ....*....|....*....|....*...
gi 15831120  138 TVNG-LAPVLSPVLGGYIVSTFDWRTLF 164
Cdd:PRK10504 140 TLPGqVGPLLGPALGGLLVEYASWHWIF 167
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
206-356 2.94e-04

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 42.65  E-value: 2.94e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 206 RRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLrggLIAAILC 285
Cdd:COG2814   9 WLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVL---LLGLLLF 85
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15831120 286 ALLTVLCAWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGF 356
Cdd:COG2814  86 ALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGL 156
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
9-291 3.46e-04

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 42.29  E-value: 3.46e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120   9 ALILGLLAGIGPMctdLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSIL 88
Cdd:cd06180   4 ALALAVAMGIGRF---AYTPLLPLMLAELGLSYAQAGWIATANYAGYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  89 CATTNNIYWLVVWRFIQGIAGAG----GSVLSRSIARDKYQGVTLTQFFAllmtVNGLAPVLSPVL-GGYIVSTFDWRTL 163
Cdd:cd06180  81 MALTSGFAALLALRFLAGAASAFvfvfGSNLVLHHATAAGRGHLIGLLFA----GVGLGIALSGLLvPAGLGGGLSWRAG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 164 FWVMAEISTVLLLGCVLFINETLPENKRGSSLlltGRSVVQNRRFMRfcLIQSFMLAGlFAYIGSSSF--VLQKEFGFSP 241
Cdd:cd06180 157 WLALALLSAVLLLLSFLLLRRGPSAPTEASAA---ESAPGLNRPLWR--LALAYGLFG-FGYIITATFlpLIARETGAGS 230
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 15831120 242 MQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVL 291
Cdd:cd06180 231 LLAGLLWSLFGLAAVPSCFLWGALSDRWGTRRALAANLLVQAVGVLLPLL 280
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
61-296 3.49e-04

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 42.26  E-value: 3.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  61 LFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSvLSRSIARDKYQGVTLTQFFALLMTVN 140
Cdd:cd17389  83 ITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVS-LSTAIVADVTSPKKRSKGMALIGVAF 161
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 141 GLAPVLSPVLGGYIVS-TFDWRTLFWVMAEI-STVLLLGCVLFI----NETLPENKRGSSLlltgrsvvqnrrfmrfcli 214
Cdd:cd17389 162 SLGFIIGPMIGAYFASfTRSLGEVFFSMPALfALVLALADLLFIffflPETLPSNLRRLGL------------------- 222
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 215 qSFMLAgLFAYIG---SSSFVLQKEFGFSPMQFSLVFGLNGIGLIIaswIFSRLARRINAMTLLRGGLIAAILCALLTVL 291
Cdd:cd17389 223 -VYFLY-LFLFSGlefTLTFLTHQRFQYTSMQQGKMFFFIGIIMAL---VQGGYVRRIKPGKEKKAVLQGLILLIPAFLL 297

                ....*
gi 15831120 292 CAWTQ 296
Cdd:cd17389 298 IGWAS 302
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
57-313 3.59e-04

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 42.28  E-value: 3.59e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNI----YW----LVVWRFIQGIA-----GAGGSVLSRSIARDK 123
Cdd:cd17367  55 IGGWLFGRLADRIGRRAALTLSVSLMAAGSLVIAVTPTYatigIWapiiLLLARLLQGLSvggeyGTSATYLSEVAPPGR 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 124 ------YQGVTLTqffALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVlllgcVLFINETLPEN---KRGSS 194
Cdd:cd17367 135 rgfyssFQYVTLI---GGQLLALGVLLVLQHTLGEDQMAAWGWRIPFLLGGVLAVV-----VLWLRRGLEETesfEAIAE 206
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 195 LLLTGRSVVQN-----RRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRI 269
Cdd:cd17367 207 SNEASAGTLRElrrhpRELLLVVGLTAGGTLAFYTWTTYLQKFLVNTAGFSKGDATWITTAALLVFMLLQPLGGRLSDRI 286
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 15831120 270 NAMTLLrggLIAAILCALLTVLC--------AWTQLPIPALVALFFTIAFCS 313
Cdd:cd17367 287 GRRPLL---LFFGIGGTLATVPLlsaldhtdSPYTAFALVLVGLVFLSGYTS 335
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
60-316 3.86e-04

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 42.25  E-value: 3.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQF-FALLMT 138
Cdd:cd17476  51 LIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSPNFIFFIICRALQGLGPAFLLPNAMALLGRTYPPGPRKNIvFSLFGA 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 139 VNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFInetlpenkrgssllltgrsvvqNRRFMRFCLIQSFM 218
Cdd:cd17476 131 TAPLGFALGGVFGGLFAQLAWWPWIFWFLAILAAIVAVAAIFWT----------------------SPSFIAVLLAVFLG 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 219 LAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLtvlcaWTQLP 298
Cdd:cd17476 189 WASFGIWVFYATQYFQNVRGYSPLLTSARFIPMAIGGVLAAITVGFLIARLPPSYIMAISMVAFLVGPIL-----FATMP 263
                       250
                ....*....|....*....
gi 15831120 299 IPALV-ALFFTIAFCSGIG 316
Cdd:cd17476 264 VHQTYwAQAFPAMIVAPFG 282
MFS_MFSD5_like cd17487
Major facilitator superfamily domain containing 5 protein; Human major facilitator superfamily ...
63-315 6.22e-04

Major facilitator superfamily domain containing 5 protein; Human major facilitator superfamily domain containing 5 protein (MFSD5) is also called molybdate-anion transporter, or molybdate transporter 2 homolog (MOT2). It acts as an atypical solute carrier (SLC) that mediates high-affinity intracellular uptake of the rare oligo-element molybdenum. It may also play a role in maintaining the glucose homeostasis and pancreatic beta-cell proliferation, as well as in altered energy homeostasis. MFSD5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341040  Cd Length: 385  Bit Score: 41.43  E-value: 6.22e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  63 GPLSDKIGRKRpliLSLLLFIVSSILCATT--NNIYWLVVWRFIQGIAgagGSVL-------------SRSIARDKyqgv 127
Cdd:cd17487  59 GSLADKFGRKR---ACLLFCVLYSLSCLTKhsPNFGVLLLGRVLGGIS---TSLLfsafeswmvhehnKRGFFPKE---- 128
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 128 TLTQFFALLMTVNGLAPVLSpvlgGYIVSTFDWRTLFWV---MAEIsTVLLLGCVLFINeTLPENK-------RGSSLLL 197
Cdd:cd17487 129 WLSTTFSKATLGNGLVAILA----GLVANFAEALGFGPVapfDAAI-PFLVLAGVLIMR-TWTENYgdpsspsRLGCQEE 202
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 198 TGRSVVQNRRFMRFCLIQSFMLAGLfaYIgsssFVLQ-----KEFGFSPMQFSLVFGLNGIGLIIASWIFSRL-ARRINA 271
Cdd:cd17487 203 ALRAILSDKKVLLLGAIQSLFESAM--YI----FVFLwtpalDPAQSGGVPLGIIFACFMVAMMIGSSLFRLLlSKRVSP 276
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 15831120 272 MTLLRGGLIAAILCALLTVLCAWTQLPIPALVAlFFTIAFCSGI 315
Cdd:cd17487 277 EHLLVIVLLVASVSLFLPVVSTITSSPKILLLA-FLVFEACVGL 319
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
53-178 1.09e-03

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 40.60  E-value: 1.09e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIAR---DKYQG--V 127
Cdd:cd17372  45 AGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGLGLGGGPQLASWYLEflpAKSRGtwM 124
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 15831120 128 TLTQFFALLMTvnglapVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGC 178
Cdd:cd17372 125 VLFSVFWTVGT------IFEASLAWLVMPRLGWRWLLAFSSVPSSLLLVFY 169
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
53-176 1.21e-03

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 40.68  E-value: 1.21e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQF 132
Cdd:cd06173 255 VGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRV 334
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 15831120 133 FALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLL 176
Cdd:cd06173 335 FSVYNALNSGAMPLGALLAGLLADALGLSAVFLLAGALLLLAAL 378
MFS_MCT11_13 cd17423
Monocarboxylate transporters 11 and 13 of the Major Facilitator Superfamily of transporters; ...
135-379 1.33e-03

Monocarboxylate transporters 11 and 13 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporters 11 (MCT11) and 13 (MCT13) are also called Solute carrier family 16 members 11 (SLC16A11) and 13 (SLC16A13), respectively. They are orphan transporters whose substrates are yet to be determined. MCT11 is expressed in skin, lung, ovary, breast, lung, pancreas, retinal pigment epithelium, and choroid plexus. Genetic variants in SLC16A11, the gene encoding MCT11, are associated with type 2 diabetes in Mexican and other Latin American populations. MCT13 is expressed in breast and bone marrow stem cells. MCT11/13 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340981 [Multi-domain]  Cd Length: 383  Bit Score: 40.45  E-value: 1.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 135 LLMTVNGLAP-VLSPVLGgYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPENKR---GSSLLLTGRSVVQNRRFMR 210
Cdd:cd17423 131 LALTGVGLSSfALSPLFQ-LLLDTYAWRGALLLLSALSLHLVPCGALLRPLALPGDPPappRSLSAAFGLSLLTHRAFLR 209
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 211 FCLIQSFMLAGLFA-YIGSSSFVLqkEFGFSPMQFSLVFGLNGI----GLIIASWIFSRLARRINAMTLLRGGLIAAILc 285
Cdd:cd17423 210 YALATTLINTGYFIpYVHLVAHAR--ALGLGEYQAAFVVSVAAVadavGRLFSGWLADLGPLRLLHLLVLWTALTGLSL- 286
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 286 alltVLCAWTQLPIPaLVALFFTIAFCSG-IGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGGEtllkm 364
Cdd:cd17423 287 ----LLLPLAKVYGS-LLALAVAYGFCAGaLAPLVFSVLPELVGVERVLNATGLLQMIESVGGLLGPPLSGWLRD----- 356
                       250
                ....*....|....*
gi 15831120 365 slaITVCYTLAFLVA 379
Cdd:cd17423 357 ---ITGDYTASFLVA 368
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
56-183 1.33e-03

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 40.33  E-value: 1.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  56 GVGQLLFGP----LSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAG--GSVLS--RSIARDKYQGv 127
Cdd:cd17391 250 GVSSLLSAPrlgkLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGllPAINSllAKITPKEVAG- 328
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 128 tltQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAeiSTVLLLGCVLFIN 183
Cdd:cd17391 329 ---RIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRAVFVVTA--LLVLLNAIWSFIF 379
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
60-356 1.52e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 40.23  E-value: 1.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVvwrFIQGIAGAGGSVLSRSIARdkyqgVTLTQFF------ 133
Cdd:cd17352  56 PLSSALVNRFGCRPVAIAGGLLAALGLLLSSFATSLWQLY---LTYGVLGGLGLGLIYSPAI-----VIVGQYFekkrgl 127
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 134 --ALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFInetlpenkrgssllltgrsVVQNRRFMRF 211
Cdd:cd17352 128 atGIAVAGSGVGTFVFPPLLRYLLDNYGWRGALLILGGLCLNLCVCGLLLR-------------------LLKDPTFVLL 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 212 CLIQSFMLAGLFAYIGSSSFVLqKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGglIAAILCALLTVL 291
Cdd:cd17352 189 ALGVSFAMLGFFVPFVYLPSYA-KSLGIDESDAAFLLSIIGISDIVGRILLGLLADKPRIGRLYLY--IFTLLILGLSLL 265
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 292 CAWTQLPIPALVALFFTIAFCSG-IGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGF 356
Cdd:cd17352 266 AFPLATTYVGLIVFSVLFGFCSGsYSSLTPVILADLVGLEKLSNAYGLVLLFQGLAALVGPPIAGL 331
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
53-116 1.64e-03

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 40.10  E-value: 1.64e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLS 116
Cdd:cd17447  46 AGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGFALTGFSIIS 109
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
53-185 2.75e-03

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 39.47  E-value: 2.75e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA-GAGGSVLSRSIARDKYQGVTLTQ 131
Cdd:cd17433  52 LGAAAGGVLGGWIVDRAGRKLSLMLCSVPFIAGFTVITAAQNVWMLYVGRLLTGLAsGVTSLVVPVYISEIAHPRVRGTL 131
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 15831120 132 FFAL-LMTVNGlapvlspVLGGYIVS-TFDWRTLFwVMAEISTVLLLGCVLFINET 185
Cdd:cd17433 132 GSCVqLMVVIG-------IMGAYLAGlVLDWRWLA-VLGSIPPTLMLLLMCFMPET 179
PRK09848 PRK09848
glucuronide transporter; Provisional
142-334 2.78e-03

glucuronide transporter; Provisional


Pssm-ID: 182109 [Multi-domain]  Cd Length: 448  Bit Score: 39.77  E-value: 2.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  142 LAPVLSPVLGGYIVSTFDWRTLfwVMAEISTVLLLGCVLFINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAG 221
Cdd:PRK09848 166 IGPSIKNSSPEEMVSVYHFWTI--VLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLIS 243
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  222 LFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIpA 301
Cdd:PRK09848 244 TFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPV-A 322
                        170       180       190
                 ....*....|....*....|....*....|...
gi 15831120  302 LVALfftiafcsGIGTVGGAEAMSAVGTQESGT 334
Cdd:PRK09848 323 LVAL--------AIASIGQGVTMTVMWALEADT 347
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
61-325 2.80e-03

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 39.37  E-value: 2.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  61 LFGPLSDKIGRKRP-LILSLLLFIVSSILC--ATTNNIYWLVVWRFIQGIAGAGGSVLSRS----IARDKYQGVTLTQFF 133
Cdd:COG2270  71 VLGAIADRSGRKKPfLAFFTLLGVLATAALffVAPGGLWLGLLLFVLANIGFEGSLVFYNAflpdIATPEEIGRVSGLGW 150
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 134 AL------LMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAeistVLLLGCVLFINETLPENKRGSS------------- 194
Cdd:COG2270 151 ALgylggvLLLLINLALFLKPEAFGLPDAGEAVRISFLLTA----LWWLLFALPLFLFLPERPRPGPapprgavragfre 226
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 195 LLLTGRSVVQNRRFMRFcLIQSFML-AGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMT 273
Cdd:COG2270 227 LRRTLRELRRYRDLLRF-LLAYFFYrDGVQTVIAFAGIYAAGVLGFSTTELIVFGLLVQIVAALGALLFGRLDDRIGPKR 305
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 15831120 274 LLRGGLIAAILCALLtVLCAWTQLpipalvaLFFTIAFCSGIGtVGGAEAMS 325
Cdd:COG2270 306 VILVSLVIWIVVCLA-AYFLTTAL-------AFWILGLLIGLV-MGGIQALS 348
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
60-176 3.04e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 39.45  E-value: 3.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA-GAGGSVLSRSIARDKYQGVTLTQfFALLMT 138
Cdd:cd17370 252 YPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYmGAQESIERAAVADLVPAELRGTA-YGLFNT 330
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 15831120 139 VNGLAPVLSPVLGGYIVSTFDWRTLFW---VMAEISTVLLL 176
Cdd:cd17370 331 VVGIGWLLASLIAGYLWDLISPSAAFLfsaVLALIALLLLL 371
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
51-108 3.81e-03

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 39.26  E-value: 3.81e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 15831120  51 SLIGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIA 108
Cdd:cd17362  48 SLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVG 105
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
71-291 4.18e-03

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 39.13  E-value: 4.18e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  71 RKRPLILSLLLFIVS-SILCATTNNIYWL-VVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ------FFALLMTVNGL 142
Cdd:cd17484  66 RKPYLILAGALGALSwLALALVSNSSLALaLLLLLLASLGVAFSDVVIDALVVEASRGAPQSLagdlqsLCWGSSAIGGI 145
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 143 apvLSPVLGGYIVSTFDWRTLFWVMAeISTVLLLGCVLFINETLPENKRGSSllltgRSVVQNRRFMRFCLIQSFMLAGL 222
Cdd:cd17484 146 ---VGSYFSGYLLELLGPRTVFAVTS-FFPLLLLIVAFFVKEERVPPHRTKE-----NFDEQLKALWETVKQPSIWLPAL 216
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120 223 FAYIGSSS--------FVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVL 291
Cdd:cd17484 217 FIFLYQATpssgsamfYFMTNELGFSPEFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGLTDLI 293
MFS_BCD_PucC-like cd06176
Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator ...
237-378 4.82e-03

Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily; The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 349950 [Multi-domain]  Cd Length: 409  Bit Score: 38.64  E-value: 4.82e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 237 FGFSPMQFSLVFGLNGIGLIIASWIFSRL-ARRINAMTLLRGGLIAAILCALLTVLCAWTQLPIPALVALFFtIAFCSGI 315
Cdd:cd06176 254 FGMSVGETTRLTAIWGGGTLLGMLLAGFLlSRRLGKKRTAALGCLLSALGFLLLALAGLLGNPWLFRPGVFL-LGLGNGL 332
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15831120 316 GTVGG-AEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGGETLLKMSLAITVCYTLAFLV 378
Cdd:cd06176 333 FTVGAlTLMMDLTGEGTAGLFMGLWGAAQALARGLGTLLGGALRDLLRALFGSPALAYGLVFLL 396
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
57-382 5.37e-03

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 38.72  E-value: 5.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  57 VGQLLFGPLSDKIG-RKRPLILSLLLFIVSSILCATTNNIYW-LVVWRFIQGIAGAGGSVLSRSIA-------RDKYQGV 127
Cdd:cd17335  47 LSAPLWGALADRFGkRKALLLLSLLAAVLFFLSLFFVAQIFWlLLLLVILGAFFSAPVVPLVDSITlqylgeeRERYGKQ 126
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 128 TLTQFFALlmtvnGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINEtlPENKRGSSLLLTGRSVVQNRR 207
Cdd:cd17335 127 RLWGSIGF-----GIAALLVGILIDRSSTYKNYTIAFYVFAVLMLLALLLALKFPFR--PKHPEPNENTGGLLALLRNPR 199
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 208 FMRFcLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCAL 287
Cdd:cd17335 200 VLAF-LLVAFLMGFGHGLIYSFLFWHLQDLGGSKTLIGLLWTVGVVSEIPFFFFSSRLIQRFGHVGLLYLGLLAYVVRWL 278
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120 288 LTVLC--AWTQLPIPALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGFGGETLLKMS 365
Cdd:cd17335 279 LYSFLenPWLVLPIELLHGLTFALVWAAAVSYASAAAPPGLRATAQGLLQGLYFGLGGGLGSLIGGYLYEAFGARTTFRF 358
                       330
                ....*....|....*..
gi 15831120 366 LAITVCYTLAFLVALTR 382
Cdd:cd17335 359 FAIAALAGLLAFFLIQR 375
TRI12 pfam06609
Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific ...
53-181 6.38e-03

Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.


Pssm-ID: 115279 [Multi-domain]  Cd Length: 598  Bit Score: 38.49  E-value: 6.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120    53 IGLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAG--AGGSVL-SRSIARDKyqgvtl 129
Cdd:pfam06609  89 MGQAVSILMMGRLTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAAMTLLGVAAgpAGASPLfIGELMSNK------ 162
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120   130 TQFFALLMTVnglAPV-----LSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLF 181
Cdd:pfam06609 163 TKFLGLLIVS---APTiamngAGPYFGQRLAIQGNWRWIFYIYIIMSAIAVLLIIIW 216
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
54-186 7.88e-03

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 37.84  E-value: 7.88e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  54 GLGVGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGaGGSVLSRSIARDKYQGvtlTQFF 133
Cdd:cd17377  51 GVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFLVGVMN-GGMSLVAFVLLNECVG---KSYW 126
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 15831120 134 ALLMTVNGL----APVLSPVLGGYIVStfdWRTLFWVMAEISTVLLLGCVLFINETL 186
Cdd:cd17377 127 ALAGSLGGLffavGIAQYALLGYFIRS---WRTLAVVVNLQGTLVFLLSLFIPGRTL 180
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
60-180 8.71e-03

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 37.99  E-value: 8.71e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831120  60 LLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTLTQ--FFALLM 137
Cdd:cd17313 299 LPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSESGRGQgtDTGLLN 378
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 15831120 138 TVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVL 180
Cdd:cd17313 379 LAISLAQILVSLLAGPIIDVKGYGTVFPVAAVASFLSLVGALF 421
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
57-107 9.83e-03

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 37.77  E-value: 9.83e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 15831120  57 VGQLLFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGI 107
Cdd:cd17437  47 VGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGI 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH