|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
30-700 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1436.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 30 IVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVD 109
Cdd:NF041535 1 VVVAAPPGLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRIYVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 110 GIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGD 189
Cdd:NF041535 81 GIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGATGD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 190 GTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQ 269
Cdd:NF041535 161 GTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQAPRADQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 270 YDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQGIDSRWTHRGELG-V 348
Cdd:NF041535 241 YNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGGVIDLTRHYQGIDTRWTHRGELGsV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 349 PVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSND 428
Cdd:NF041535 321 PVTLTGGLDYETMTEQRKGYENFTLNNGVPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWFDSND 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 429 HYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR 508
Cdd:NF041535 401 HYITAGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELGSKTR 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 509 IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCN-EQDCNG 587
Cdd:NF041535 481 IGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVCGaSQDCNG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 588 NRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEY 667
Cdd:NF041535 561 NRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNLFDRRY 640
|
650 660 670
....*....|....*....|....*....|...
gi 15831309 668 VGSVIVNESNGRYYEPAPGRNYGVGVNIAWRFE 700
Cdd:NF041535 641 VGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-697 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 589.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 8 QTVLPALLVLSPVVFAADE---QTMIVSAAPQVVSEL-DTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYA 83
Cdd:COG4772 2 RRALAAALLLAAAAAAEAAttlETVVVTGSRAAEARLkDVPGSVSVVDREELE-NQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 84 QDLQLSIRGFGSRstyGIRGIRLYVDGIPATMP---DGQGQTSNiDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTG 159
Cdd:COG4772 81 LRPNIGIRGLGPR---RSRGITLLEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 160 QQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIF 239
Cdd:COG4772 157 PTAFGGELRVTGGSFGYRRTHASVGGTVGN------FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 240 NSVDIKADDPGGLTKAEWKANPQQAPR-AEQYDTRktikQTQAGLRYERSLSSRDDMSVMMYAGERETTQYqsIPMAPQl 318
Cdd:COG4772 231 QYYDEDANTPGGLTDAQFDADPRQSYRpADQFDTR----RTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTA- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 319 NPSHAGSVITL---QRHYQGIDSRWTHRGEL-GVPVTFTTGLNYENMSENRKGYNNFRLNsgmpeyGQKG-ELRRDERNL 393
Cdd:COG4772 304 DPNTPGLGLRGnprGYRSYGIEPRLTHRFELgGVPHTLEVGLRYHREEEDRKQYVNTYGQ------GRSGaGLRRDRRFS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 394 MWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:COG4772 378 ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEP 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 474 PTINELSYRadgqSGMNFGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGG-RTTYKNAGKTRRQGAE 551
Cdd:COG4772 458 PTFGDLAYG----NGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLE 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 552 LAWDQRFAG----DFRVNASWTWLDATYRSNVCNEQdcNGNRMPGIARNMGFASIGYVPeDGWYAGMEARYMGDIMADDE 627
Cdd:COG4772 534 LALDYDLLKggglGLPLFAAYTYTDAEFTSDFGPVF--AGNRLPYVPRHQLTAGLGYEH-GGWTANLNGRYVSEQFTDAA 610
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831309 628 NTA------KAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGryYEPAPGRNYGVGVNIAW 697
Cdd:COG4772 611 NTVadgsfgKIPSYTVLDLSASYDFGKN---LSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-697 |
1.20e-74 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 253.14 E-value: 1.20e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 47 VSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQG--QTSN 124
Cdd:cd01347 2 VSVITAEDIE-KQPATSLADLLRRIPGVSVTRGGGGGGS-TISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 125 IDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTT 203
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSgAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGALADDGAFGARLYGA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 204 RFTTHGY------RDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIK 277
Cdd:cd01347 154 YRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 278 QTQ-----AGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQ-----GIDSRWT-HRGEL 346
Cdd:cd01347 234 YRDryrkrASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERdttqlGFDAGLNaPFGTG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 347 GVPVTFTTGLNYenmsenRKGYNNFRLNSGmpeygqkgelrrdernlmwnidpYLQTQWQLSEKLSLDAGVRYSSVWFDS 426
Cdd:cd01347 314 PVAHTLTLGVEY------RREELDEKQTAL-----------------------YAQDTIELTDDLTLTLGLRYDHYDQDS 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 427 NDHYvtpgNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFG---LKPSTNDTIEI 503
Cdd:cd01347 365 KDTI----AGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKPEKSKQYEL 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 504 GSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGGR---TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnv 579
Cdd:cd01347 441 GLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR-- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 580 cNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGMEARYMGDIMADDE---NTAKAPSYTLVGLFTGYKYNYHnltVDL 655
Cdd:cd01347 519 -TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN---LTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 15831309 656 FGRVDNLFDKEYVGSVIVNESNGRYYePAPGRNYGVGVNIAW 697
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
42-695 |
3.22e-56 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 203.03 E-value: 3.22e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 42 DTPAAVSVVDGEEMRLaTPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGirgiRLYVDGIPATmpdGQGQ 121
Cdd:TIGR01783 1 DIPQSVSVITRQELED-QQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDID----NVYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 122 TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVDYTV 200
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGgSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAD---GTFRGRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 201 STTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPR---AEQYDTRKTIK 277
Cdd:TIGR01783 150 NGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSdryLGTSSNRNYDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 278 QTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQGIDSR---WTHRGEL-GVPVTFT 353
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVqidAGLDGEFeTGPIEHD 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 354 TGLNYENMSENRKGYNN-FRLNSGMPEYGQKGELRRDERNLMWNIDP---------YLQTQWQLSEKLSLDAGVRYSSVW 423
Cdd:TIGR01783 310 LLLGVSYGQRTTNRFNNtGYPSDNIYSLTATSSARTDIGDSPKDRALssttkalngVALQRILLADKWTLTLGGRYDSVD 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 424 FDSNDhyvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQsgmnfGLKPSTNDTIEI 503
Cdd:TIGR01783 390 VKSNN-----GVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKGKNYEL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 504 GSKTRIGDGLL-SLALFQTDTDDEIVVDSSSGgrTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNvcNE 582
Cdd:TIGR01783 460 GVRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTED--TN 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 583 QDCNGNRMPGIARNMGFASIGYVPEDGWY---AGMEARYMGDIMADDENTAKAPSYTLVGLFTGYK-YNYHNLTVDLFgr 658
Cdd:TIGR01783 536 GDTQGNTVPFVPKHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDlTKKKNLTLALN-- 613
|
650 660 670
....*....|....*....|....*....|....*..
gi 15831309 659 VDNLFDKEYVGSVIvNESNGRYYEPAPGRNYGVGVNI 695
Cdd:TIGR01783 614 VNNLFDRDYYTSGY-RWGPSAYIYPGAPRTVGLSVSY 649
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
226-695 |
2.62e-55 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 196.53 E-value: 2.62e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 226 GVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKT--IKQTQAGLRYERSLSSRDDMSVMMYAGE 303
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYsdTDRKRLSLGYDYDLGDGLSWLSTLRLGL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 304 RETTQYQSIPMAPQLNPShAGSVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQK 383
Cdd:pfam00593 86 RYSSLDGDYTSNSSGLSG-AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 384 GELRRDERNlmwNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSgdasYHKWLPAGSLKYAMTDAWNI 463
Cdd:pfam00593 165 SSYSDTTTD---SYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRS----YSAFSPRLGLVYKPTDNLSL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 464 YLAAGRGFETPTINELSYRADGQSGM-----NFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGR-- 536
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLgg 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 537 --TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNeqdcNGNRMPGIARNMGFASIGY-VPEDGWYAG 613
Cdd:pfam00593 318 tvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD----TGNPLPNVPRHTANLGLTYdFPLGGWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 614 MEARYMGD---IMADDENTAKAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGRYYePAPGRNYG 690
Cdd:pfam00593 394 LGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*
gi 15831309 691 VGVNI 695
Cdd:pfam00593 470 LGLSY 474
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
5-681 |
1.15e-23 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 106.12 E-value: 1.15e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 5 FVRQTVLPALLVLSPVVFAA--DEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNY 82
Cdd:PRK10064 7 FVRVGLCASAISCAWPVLAVddDGETMVVTASAVEQNLKDAPASISVITQEDLQ-RKPVQNLKDVLKEVPGVQLTNEGDN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 83 AQDlqLSIRGFGSRSTYG-IRGIRlyVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQ-TG 159
Cdd:PRK10064 86 RKG--VSIRGLDSSYTLIlIDGKR--VNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGsDALGGVVNIITKkIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 160 QQpptieassYYGSFgswryglkatgatgdgtqpgDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRiddasklslIF 239
Cdd:PRK10064 162 QK--------WHGTV--------------------TVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMK---------AY 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 240 NSVDIKADDpggltkAEWKANPQ---QAPRAEQYDTRK-------TIKQTQ---AGLRYERSLSSRDDMSV-----MMYA 301
Cdd:PRK10064 205 GSLAKREKD------DPQNSTTTdtgETPRIEGFTSRDgnvefawTPNQNHdftAGYGFDRQDRDSDSLDKnrlerQNYS 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 302 ---------GERETTQYqsipmAPQLNPSHAGSVITLQRHYQGIDSRWT-HRGELGVPVTFTTGLNYENMSENRKGYNNF 371
Cdd:PRK10064 279 lshngrwdyGNSELKYY-----GEKVENKNPGNSSPITSESNSIDGKYTlPLTAINQFLTFGGEWRHDKLSDAVNLTGGT 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 372 RLNSGMPEYGQkgelrrdernlmwnidpYLQTQWQLSEKLSLDAGVRYssvwfdsnDHYVTPGNgddsgdasyhKWLPAG 451
Cdd:PRK10064 354 SSKTSASQYAL-----------------FVEDEWRIFEPLALTTGVRM--------DDHETYGD----------HWSPRA 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 452 SLKYAMTDAWNIYLAAGRGFETPTINELSyrADGQSGMNFG---------LKPSTNDTIEIGSKTRIGDGLL-----SLA 517
Cdd:PRK10064 399 YLVYNATDTVTVKGGWATAFKAPSLLQLS--PDWTSNSCRGackivgspdLKPETSESWELGLYYMGEEGWLegvesSVT 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 518 LFQTDTDDEIVVDSSS----------------GGRTT------YKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDAty 575
Cdd:PRK10064 477 VFRNDVDDRISISRTSdvnaapgyqnfvgfetNGRGRrvpvfrYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDG-- 554
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 576 rSNVCNEQDCNGNRMPgiaRNMGFASIGYVPE--DGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHnltV 653
Cdd:PRK10064 555 -RDVSNGENKPLSDLP---FHTANGTLDWKPLalEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKD---V 627
|
730 740
....*....|....*....|....*....
gi 15831309 654 DLFGRVDNLFDKEYV-GSVIVNESNGRYY 681
Cdd:PRK10064 628 KLRAGVLNLGDKDLSrDDYSYNEDGRRYF 656
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
30-700 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1436.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 30 IVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVD 109
Cdd:NF041535 1 VVVAAPPGLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRIYVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 110 GIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGD 189
Cdd:NF041535 81 GIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGATGD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 190 GTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQ 269
Cdd:NF041535 161 GTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQAPRADQ 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 270 YDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQGIDSRWTHRGELG-V 348
Cdd:NF041535 241 YNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGGVIDLTRHYQGIDTRWTHRGELGsV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 349 PVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSND 428
Cdd:NF041535 321 PVTLTGGLDYETMTEQRKGYENFTLNNGVPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWFDSND 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 429 HYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR 508
Cdd:NF041535 401 HYITAGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELGSKTR 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 509 IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCN-EQDCNG 587
Cdd:NF041535 481 IGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVCGaSQDCNG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 588 NRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEY 667
Cdd:NF041535 561 NRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNLFDRRY 640
|
650 660 670
....*....|....*....|....*....|...
gi 15831309 668 VGSVIVNESNGRYYEPAPGRNYGVGVNIAWRFE 700
Cdd:NF041535 641 VGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
8-697 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 589.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 8 QTVLPALLVLSPVVFAADE---QTMIVSAAPQVVSEL-DTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYA 83
Cdd:COG4772 2 RRALAAALLLAAAAAAEAAttlETVVVTGSRAAEARLkDVPGSVSVVDREELE-NQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 84 QDLQLSIRGFGSRstyGIRGIRLYVDGIPATMP---DGQGQTSNiDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTG 159
Cdd:COG4772 81 LRPNIGIRGLGPR---RSRGITLLEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 160 QQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIF 239
Cdd:COG4772 157 PTAFGGELRVTGGSFGYRRTHASVGGTVGN------FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 240 NSVDIKADDPGGLTKAEWKANPQQAPR-AEQYDTRktikQTQAGLRYERSLSSRDDMSVMMYAGERETTQYqsIPMAPQl 318
Cdd:COG4772 231 QYYDEDANTPGGLTDAQFDADPRQSYRpADQFDTR----RTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTA- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 319 NPSHAGSVITL---QRHYQGIDSRWTHRGEL-GVPVTFTTGLNYENMSENRKGYNNFRLNsgmpeyGQKG-ELRRDERNL 393
Cdd:COG4772 304 DPNTPGLGLRGnprGYRSYGIEPRLTHRFELgGVPHTLEVGLRYHREEEDRKQYVNTYGQ------GRSGaGLRRDRRFS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 394 MWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:COG4772 378 ADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEP 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 474 PTINELSYRadgqSGMNFGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGG-RTTYKNAGKTRRQGAE 551
Cdd:COG4772 458 PTFGDLAYG----NGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLE 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 552 LAWDQRFAG----DFRVNASWTWLDATYRSNVCNEQdcNGNRMPGIARNMGFASIGYVPeDGWYAGMEARYMGDIMADDE 627
Cdd:COG4772 534 LALDYDLLKggglGLPLFAAYTYTDAEFTSDFGPVF--AGNRLPYVPRHQLTAGLGYEH-GGWTANLNGRYVSEQFTDAA 610
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831309 628 NTA------KAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGryYEPAPGRNYGVGVNIAW 697
Cdd:COG4772 611 NTVadgsfgKIPSYTVLDLSASYDFGKN---LSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
27-681 |
1.88e-136 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 415.38 E-value: 1.88e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 27 QTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQdlQLSIRGFGSrstyGIRGIRL 106
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLE-DQPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGG----GGNRVLV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 107 YVDGIPATMPD-GQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKAT 184
Cdd:COG1629 75 LVDGVPLNDPSgGDGGLSYIDPEDIERVEVLRGPSSALYGsGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 185 GATGDgtqpgdVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWK---ANP 261
Cdd:COG1629 155 GGNGK------LAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRprgAMD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 262 QQAPRAEQYDTRKTIKQTQAGLRYERSLssrDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQGIDSRWT 341
Cdd:COG1629 229 DGTNPYSNDTDDNTRDRYSLSLEYEHLG---DGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLT 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 342 HRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQkgelRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSS 421
Cdd:COG1629 306 YDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTS----GADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDY 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 422 VWFDSNDhyVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYR-ADGQSGMNFGLKPSTNDT 500
Cdd:COG1629 382 VSYDVDD--TVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANgTDPYSVGNPDLKPETSTN 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 501 IEIGSKTRIGDG--LLSLALFQTDTDDEIVVD---SSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATY 575
Cdd:COG1629 460 YELGLRYRLLDGrlSLSLALFYSDVDNEILSVplpNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKF 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 576 RSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMADDENTAKAP-SYTLVGLFTGYKYNYHnltVD 654
Cdd:COG1629 540 DDDTDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGYRFGDN---LT 616
|
650 660
....*....|....*....|....*..
gi 15831309 655 LFGRVDNLFDKEYVGSVIVNESNGRYY 681
Cdd:COG1629 617 LSLGVDNLFDKKYATSLSVRASNVRGF 643
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
41-697 |
8.99e-83 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 274.83 E-value: 8.99e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 41 LDTPAAVSVVDGEEM--RLATpriNLSESLTGVPGLQVQNRQNYAQDlQLSIRGFGSRSTYgirgirlYVDGIPatmpdg 118
Cdd:COG4774 7 LDTPQSVTVVTRELIedQGAT---SLADALRNVPGVTFGAGEGGNGD-SFSIRGFSASGDI-------YVDGLR------ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 119 QGQTSNIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDgtqpgDVD 197
Cdd:COG4774 70 DPGQYRRDTFNLERVEVLKGPASVLYGRGSpGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGD-----DLA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 198 YTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTkAEWKANPQQAPRAEQY---DTRK 274
Cdd:COG4774 145 YRLNGMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVP-AVANGRPVDVDRSTFYgqpDDYS 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 275 TIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQlnpshAGSVITLQRHYQGIDSR-WTHRGEL------- 346
Cdd:COG4774 224 DSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGN-----ATGTVTRSAYRRDQDNDtLSNQTDLtgkfdtg 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 347 GVPVTFTTGLNYENMSENRKGYNNFR----LNSGMPEYGQKGE----LRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVR 418
Cdd:COG4774 299 GVKHTLLAGVEYSREDSDNARYSGGGtaptVNLYNPVYGAPVTgptlGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLR 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 419 YSSVWFDSNDHyvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFeTPTINELSYRADGQSgmnfgLKPSTN 498
Cdd:COG4774 379 YDRFDTDYTDR----TTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQA-----LDPEKS 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 499 DTIEIGSKTRIGDG--LLSLALFQTDTDDEIVVDSSSGGrtTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYR 576
Cdd:COG4774 449 RQYEVGVKWDLLDGrlSLTAALFRIEKTNVRTTDPANPG--VYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEIT 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 577 SNvcNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNyHNLTVDL 655
Cdd:COG4774 527 KS--ANAANVGNRLPNVPRHSASLWTTYdLPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN-KNLTLRL 603
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 15831309 656 fgRVDNLFDKEYVGSVIvneSNGRYYePAPGRNYGVGVNIAW 697
Cdd:COG4774 604 --NVNNLTDKRYYASAY---GSGYVT-PGAPRTVLLSASYRF 639
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
23-649 |
2.95e-82 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 272.89 E-value: 2.95e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 23 AADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTygir 102
Cdd:COG4771 24 ATELEEVVVTATRTEQSLSDAPASVSVITAEEIE-KLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDRV---- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 103 giRLYVDGIP--ATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRY 179
Cdd:COG4771 99 --LVLIDGVPvnNPALGGGGDLSYIPPDDIERIEVIRGPASALYGsDAIGGVINIITKKPTDELEGSVSLGYGSNGNGTY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 180 GLKATGATGDGtqpgDVDYTVSTTRFTTHGYRDH--------SGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGG 251
Cdd:COG4771 177 SGSLSLGGPGD----KLSFLLSGSYRDRDGYLDYrnggfvgnSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 252 LtkaewkANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSsrDDMSVMMYAGERETTQYQSIPMAPQLNPShagsviTLQR 331
Cdd:COG4771 253 T------LGDTEISSDNAGDRDTTTDRGNYSLRYNGDLG--DNLDLSLYYSRTDRDSTNGSLGGSTGSFS------DSDD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 332 HYQGIDSRWTHRgeLGVPVTFTTGLNYenmsenrkgyNNFRLNSGMPEYGQKGELRrdernlmwNIDPYLQTQWQLSEKL 411
Cdd:COG4771 319 TTYGLELDLTYP--LGGNHTLTLGAEY----------RYDDLDSSSFLGGADASRD--------TYGLFAQDEWKLTDKL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 412 SLDAGVRYssvwfdsnDHYvtpgngDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGM-- 489
Cdd:COG4771 379 TLTAGLRY--------DYY------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRyv 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 490 --NFGLKPSTNDTIEIGSKTRIGDG--LLSLALFQTDTDDEIV---VDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDF 562
Cdd:COG4771 445 lgNPDLKPETSDNYELGLEYRLGNGglSLSLTGFYTDIKDLIVlvpVGPGPGDVLQYENVGKARTYGLELELKYRLGKGL 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 563 RVNASWTWLDATYrsnvcnEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMAD---DENTAKAPSYTLVG 639
Cdd:COG4771 525 TLTASYTYLDSKI------DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTppsGRLEGYTPGYTLLD 598
|
650
....*....|
gi 15831309 640 LFTGYKYNYH 649
Cdd:COG4771 599 LRASYKLTKN 608
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
47-697 |
1.20e-74 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 253.14 E-value: 1.20e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 47 VSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQG--QTSN 124
Cdd:cd01347 2 VSVITAEDIE-KQPATSLADLLRRIPGVSVTRGGGGGGS-TISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 125 IDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTT 203
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSgAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGFDVSGALADDGAFGARLYGA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 204 RFTTHGY------RDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIK 277
Cdd:cd01347 154 YRDGDGTidgdgqADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 278 QTQ-----AGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQ-----GIDSRWT-HRGEL 346
Cdd:cd01347 234 YRDryrkrASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERdttqlGFDAGLNaPFGTG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 347 GVPVTFTTGLNYenmsenRKGYNNFRLNSGmpeygqkgelrrdernlmwnidpYLQTQWQLSEKLSLDAGVRYSSVWFDS 426
Cdd:cd01347 314 PVAHTLTLGVEY------RREELDEKQTAL-----------------------YAQDTIELTDDLTLTLGLRYDHYDQDS 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 427 NDHYvtpgNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFG---LKPSTNDTIEI 503
Cdd:cd01347 365 KDTI----AGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKPEKSKQYEL 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 504 GSKTRIGDGL-LSLALFQTDTDDEIVVDSSSGGR---TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnv 579
Cdd:cd01347 441 GLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR-- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 580 cNEQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGMEARYMGDIMADDE---NTAKAPSYTLVGLFTGYKYNYHnltVDL 655
Cdd:cd01347 519 -TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKN---LTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 15831309 656 FGRVDNLFDKEYVGSVIVNESNGRYYePAPGRNYGVGVNIAW 697
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRGSGLYGY-YGPGRTYYLSVSYKF 635
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
41-699 |
3.34e-70 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 242.11 E-value: 3.34e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 41 LDTPAAVSVVDGEEM--RLATpriNLSESLTGVPGLQVQNRQNYAQDlQLSIRGFGSRSTYgirgirlyVDGipatMPDG 118
Cdd:COG4773 63 RETPQSVSVVTRQLIedQGAT---TLDDALRNVPGVTVSSYDGGGRD-SFSIRGFSIDNYL--------RDG----LPLG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 119 QGQTSNIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVD 197
Cdd:COG4773 127 GFGGGQPDTANLERVEVLKGPAGLLYGAGSpGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNED---GTLR 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 198 YTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEwkANPQQAPR----AEQYDTR 273
Cdd:COG4773 204 YRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLD--GTLLDLPRstnlGEPWDYY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 274 KTiKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHY----QGIDSRWTHRGELGvP 349
Cdd:COG4773 282 DT-ETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLTRYASARDGdsrsDSLDANLNGKFETG-G 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 350 V--TFTTGLNYENMSENRKGYNNFRLNSGMPEYGQ-----KGELRRDERNLMWNIdpYLQTQWQLSEKLSLDAGVRYSsv 422
Cdd:COG4773 360 LehTLLVGADYSRYDSDSDSATAGTINIYNPVYGNlpepdFDASDTDTTTRQTGL--YAQDQISLTDRLSLLLGGRYD-- 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 423 WFDSNDHYvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTinelSYRADGQSgmnfgLKPSTNDTIE 502
Cdd:COG4773 436 WYETDSTN---RLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQS----GADNNGNP-----LDPETGKQYE 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 503 IGSKTRIGDG--LLSLALFQTDTDDEIVVDSssGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVC 580
Cdd:COG4773 504 AGVKGELFDGrlNATLAVFDITQKNVATTDP--DNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDAD 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 581 NEQdcnGNRMPGIARNMG--FAS--IGYVPEDGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNyHNLTVDLf 656
Cdd:COG4773 582 ALE---GKRLTNVPRHTAslWTTyrFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG-KNWTLQL- 656
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 15831309 657 gRVDNLFDKEYVGSVivneSNGRYYEPAPGRNygVGVNIAWRF 699
Cdd:COG4773 657 -NVNNLFDKKYYASS----GSRGYVYYGAPRN--VRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
42-695 |
3.22e-56 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 203.03 E-value: 3.22e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 42 DTPAAVSVVDGEEMRLaTPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGirgiRLYVDGIPATmpdGQGQ 121
Cdd:TIGR01783 1 DIPQSVSVITRQELED-QQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDID----NVYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 122 TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGDVDYTV 200
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGgSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAD---GTFRGRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 201 STTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPR---AEQYDTRKTIK 277
Cdd:TIGR01783 150 NGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSdryLGTSSNRNYDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 278 QTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQGIDSR---WTHRGEL-GVPVTFT 353
Cdd:TIGR01783 230 REYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVqidAGLDGEFeTGPIEHD 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 354 TGLNYENMSENRKGYNN-FRLNSGMPEYGQKGELRRDERNLMWNIDP---------YLQTQWQLSEKLSLDAGVRYSSVW 423
Cdd:TIGR01783 310 LLLGVSYGQRTTNRFNNtGYPSDNIYSLTATSSARTDIGDSPKDRALssttkalngVALQRILLADKWTLTLGGRYDSVD 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 424 FDSNDhyvtpGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQsgmnfGLKPSTNDTIEI 503
Cdd:TIGR01783 390 VKSNN-----GVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKGKNYEL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 504 GSKTRIGDGLL-SLALFQTDTDDEIVVDSSSGgrTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNvcNE 582
Cdd:TIGR01783 460 GVRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTED--TN 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 583 QDCNGNRMPGIARNMGFASIGYVPEDGWY---AGMEARYMGDIMADDENTAKAPSYTLVGLFTGYK-YNYHNLTVDLFgr 658
Cdd:TIGR01783 536 GDTQGNTVPFVPKHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDlTKKKNLTLALN-- 613
|
650 660 670
....*....|....*....|....*....|....*..
gi 15831309 659 VDNLFDKEYVGSVIvNESNGRYYEPAPGRNYGVGVNI 695
Cdd:TIGR01783 614 VNNLFDRDYYTSGY-RWGPSAYIYPGAPRTVGLSVSY 649
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
226-695 |
2.62e-55 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 196.53 E-value: 2.62e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 226 GVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKT--IKQTQAGLRYERSLSSRDDMSVMMYAGE 303
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYsdTDRKRLSLGYDYDLGDGLSWLSTLRLGL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 304 RETTQYQSIPMAPQLNPShAGSVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQK 383
Cdd:pfam00593 86 RYSSLDGDYTSNSSGLSG-AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 384 GELRRDERNlmwNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSgdasYHKWLPAGSLKYAMTDAWNI 463
Cdd:pfam00593 165 SSYSDTTTD---SYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRS----YSAFSPRLGLVYKPTDNLSL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 464 YLAAGRGFETPTINELSYRADGQSGM-----NFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGR-- 536
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLgg 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 537 --TTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNeqdcNGNRMPGIARNMGFASIGY-VPEDGWYAG 613
Cdd:pfam00593 318 tvYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD----TGNPLPNVPRHTANLGLTYdFPLGGWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 614 MEARYMGD---IMADDENTAKAPSYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSVIVNESNGRYYePAPGRNYG 690
Cdd:pfam00593 394 LGARYVGSgerRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*
gi 15831309 691 VGVNI 695
Cdd:pfam00593 470 LGLSY 474
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
27-697 |
1.31e-44 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 170.67 E-value: 1.31e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 27 QTMIVSAA----PQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVQNRQnyaqdlqlsiRGFGSrsTYGIR 102
Cdd:TIGR01786 1 DTITVTATrtadPQRRDLSVTPASVSVISREQLKSQQVR-NLRDLLRYEPGVSVVEGG----------RGGSQ--GINIR 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 103 G-----IRLYVDGIP-ATMPDGQGQTS----NIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTqtgqqpptIEASSYY 171
Cdd:TIGR01786 68 GldknrVAVLVDGIRqNTSYGGQGSTFyainSIDPELIKSIEIVKGASSSLYGSgALGGVVAFRT--------KDAADLL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 172 GSFGSWRYGLKATGATGDGT---------QPGDVDYTVSTTRFTTHGYRDHSGAQKNLAN----------------AKLG 226
Cdd:TIGR01786 140 KPGKDLGGLSKLGYSSANNRftqsvaaagRNDDVDALVQATYRRGHELKNGNKANIGNESkrskpnpsdyksqsflAKLG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 227 VRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYD-TRKTIKQTQAGLRYE-RSLSSRDDMSVMMYAGER 304
Cdd:TIGR01786 220 WQLNDAHRLGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVlGDSKTRDRRTGLDYElNPDNSWLDTVKLALDKQY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 305 -ETTQYQSIPMAPQLNPSHAGSVITLQRHYQ--GIDSR-WTHRGELGVPVTFTTGLNYENMSENRkGYNNFRlNSGMPEY 380
Cdd:TIGR01786 300 iQLYNYLNATSASDYPGVDKNGRYKDKYDYYtlGFDTNnKIEFSVHSLSLTYGLDRFKDKVSTGD-SRRNLP-TAAYNLY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 381 GQKGELRRDERNlmwNIDPYLQTQWQLSEKLSLDAGVRYssvwfdsnDHYVTPGNGDDSGDA-----SYHKWLPAGSLKY 455
Cdd:TIGR01786 378 GYEGENRPVKGS---NFGLFLQDNIKLGDWLSLSAGLRY--------DHYKTDPKADESKDYgaiskTYSRWSPSLGLTY 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 456 AMTDAWNIYLAAGRGFETPTINEL--SYRADGQSGMNF----GLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEI-- 527
Cdd:TIGR01786 447 KPTPWLTLYYSYSQGFRAPSFDELygTGAHPGGGPYTFlpnpNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIdl 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 528 ---------VVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVcneQDCNGNR-MPGIARNM 597
Cdd:TIGR01786 527 gigvtakgnMAQVGSNTITNYVNIDNARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTKG---KDSDTNPwLNAITPLK 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 598 GFASIGY-VPEDGWYAGMEARYMGDIMADDENT-------------AKAPSYTLVGLFTGYKYNyHNLTVDlFGrVDNLF 663
Cdd:TIGR01786 604 VVLGLGYdHPDEKWGVGLTLTFSGAKDAVDAYAtyyengeaakagpLRTPSYTVVDLYGYYKPN-KNLTLR-FG-VYNLL 680
|
730 740 750
....*....|....*....|....*....|....*
gi 15831309 664 DKEYVGSVIVNESNGR-YYEPAPGRNYGVGVNIAW 697
Cdd:TIGR01786 681 DRKYTTWESARQAGPLaTGYTAPGRNYKASVEYKF 715
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
27-697 |
1.01e-43 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 167.57 E-value: 1.01e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 27 QTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVQNRQNyAQDLQLSIRGF-GSRstygirgIR 105
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQAN-NLADALNTVPGVDVTGGGR-PPGQSINIRGLqDNR-------VL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 106 LYVDGIPATMPDGQGQ--TSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTT-------QTGQQpPTIEASSYYGSFG 175
Cdd:TIGR01785 73 VVVDGARQNYQRGGAHngSLFVDPELLKRIEIVKGPSSSLYGsGALGGVVAFRTkdaadllRPGQL-FGGLAKLSYGSNN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 176 SwRYGLKATGAtgdGTQPGDVDYTVSTTRFTTHGYRDHSG--------AQKNLAnAKLGVRIDDASKLSLifnsvdikad 247
Cdd:TIGR01785 152 N-SFGGSVAVA---GRLDDNLDALVAATYRDGGNYRNGNKeeatnsayVQKNLL-AKLGWQLDDAQRLEF---------- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 248 dpgGLTKAEWKANPQQ--APRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGS 325
Cdd:TIGR01785 217 ---SYFTTEGSLDEAQnsGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 326 VITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMsENRKGynNFRLNSGMPEYGqkgelrrdernlmwNIDPYLQTQW 405
Cdd:TIGR01785 294 EEGYQYTTYGATLQNTSRFDVASWSTLTYGVDWMKD-KRRTE--SFDPNSVTTIVP--------------NPPSAKEYFF 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 406 QL---------SEKLSLDAGVRYssvwfdsnDHYVT-PGNGDDSGDASYH--KWLPAGSLKYAMTDAWNIYLAAGRGFET 473
Cdd:TIGR01785 357 GLflqdnipllDDRLTLSAGLRY--------DHYKLsPKTTADTEAVDRSysRWSPSLGLSYKPVDWLTLYASYSQGFRA 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 474 PTINEL--SYRADGQSGM-----NFGLKPSTNDTIEIGSKTRIGDGLLS-------LALFQTDTDDEIV--------VDS 531
Cdd:TIGR01785 429 PSIDELygTGDHPGTPGGytfapNPNLKPETSKTWELGANLSFDNLLLDndqlqfkVAYFYNDVKDFIDltigvtdnVTA 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 532 SSGGRTTYKNAGKTRRQGAELAWDQRFaGDFRVNASWTWLDAtyrsnvcneQDCNgnrmpgiaRNMGFASIG-------- 603
Cdd:TIGR01785 509 GMNNITQYVNIDGARIRGIEASASYDA-GLWATGLSYGYTIG---------KDQN--------TNQWLSNIPplklvvtv 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 604 --YVPEDGWYAGMEARY-------MGDIMADDENTAKAPSYTLVGLFTGYKYN-YHNLTVDLfgRVDNLFDKEYVgsviv 673
Cdd:TIGR01785 571 gyRFPDRRLDLGAKAAYyerqsesPTTEDVAANGLLTTPGYTVVDLYATYQPNaVKGLTVRF--GVNNLTDRKYT----- 643
|
730 740
....*....|....*....|....
gi 15831309 674 nESNGrYYEPAPGRNYGVGVNIAW 697
Cdd:TIGR01785 644 -PAQS-VPGAGPGRNFKGSVKYQF 665
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
29-309 |
3.69e-36 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 137.31 E-value: 3.69e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 29 MIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirgiRLYV 108
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELE-RSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQT------LVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 109 DGIPATMP-DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGA 186
Cdd:COG4206 74 DGVPLNDPsLGGVDLSLIPPDDIERIEVLKGAASALYGsDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 187 TGDGtqpgdvDYTVSTTRFTTHGYR-------DHSGAQKNLANAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWkA 259
Cdd:COG4206 154 AGKF------SYSLSASYRRSDGYRyndpdlrNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRN-L 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 15831309 260 NPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQY 309
Cdd:COG4206 227 RLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
7-689 |
3.29e-31 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 129.60 E-value: 3.29e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 7 RQTVLPALLV-LSPVVF-----AADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVQNRQ 80
Cdd:TIGR01779 3 KSALAPALASlLTLCSAlhaneAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAK-SLPELLRRLPGVSIAQNG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 81 NYAQDLQLSIRGFGSRStygirgIRLYVDGIP-ATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTQT 158
Cdd:TIGR01779 82 GRGQNTSLFLRGTESDH------VLVLIDGIRfGSAAAGAADFQQLPVELVERIEYVRGPRSSLYGSeAIGGVINIITRR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 159 GQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQ---PGDVDYT--VSTTRFTTHGYR-DHSGAQKNLANAKLGVRIDDA 232
Cdd:TIGR01779 156 RSGGQGTTLSAGLGSLDYQEYSIASGVAIGENGWysvALGTESTkgINVRPGGPGVYDpDRDGFRSDSLLLGGGHRFDES 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 233 SKLSLIF----NSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQagLRYERSLSSRDDMSVMMYAGERETTQ 308
Cdd:TIGR01779 236 WSLFVNAlryeNRNDYDNYSFGTRLYKEAEKGDQSFTGGRQRQSERDVSELT--LSTGKSKDWDYAYSKGRYSSTSDTRE 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 309 YQSIpmapqlnpshagsvitlqrhyqgidsRWTHRGELGVPVTFTTGLNYENmsenrkgynnfrlNSGMPEYGQKGElrr 388
Cdd:TIGR01779 314 QRNI--------------------------QWQNDLLVGDGWVLAGGVDWQK-------------DSIISSTADKED--- 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 389 DERNLMWnidpYLQTQWQLSEKlSLDAGVRyssvwFDSNDHYvtpgNGDDSGDAsyhkwlpagSLKYAMTDAWNIYLAAG 468
Cdd:TIGR01779 352 DRSNTAA----FAQVLQQWGQQ-LLEASLR-----RDDNQQF----GSHTTGSI---------AWGYQFIEELRFTASYG 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 469 RGFETPTINELSYRADGqsgmNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRttYKNAGKTRRQ 548
Cdd:TIGR01779 409 TAFKAPNLNQLYYPSYG----NPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHPKGY--PNNIGEARIK 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 549 GAELAWDQRFAGdFRVNASWTWLDAtyrsnvcneQDCN-GNRMPGIARNMGFASIGYVPED-GW---YAGMEARYMGDIM 623
Cdd:TIGR01779 483 GVEATAEFATGG-WTHQLSVDLLDA---------QNVNtGNTLPRRARQMYKWNADRAFEQfDWgasYQYVGKRYDDDYN 552
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15831309 624 ADDENTAKAPSYTLVGLFTGYKYNYHnLTVDlfGRVDNLFDKEYVGSvivnesngrYYEPAPGRNY 689
Cdd:TIGR01779 553 TYPTQNVRLGGYSLLDLRVSYYVTDS-WTVQ--GRIANLFDKDYETA---------YGYPQAGRAY 606
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
5-681 |
1.15e-23 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 106.12 E-value: 1.15e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 5 FVRQTVLPALLVLSPVVFAA--DEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNY 82
Cdd:PRK10064 7 FVRVGLCASAISCAWPVLAVddDGETMVVTASAVEQNLKDAPASISVITQEDLQ-RKPVQNLKDVLKEVPGVQLTNEGDN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 83 AQDlqLSIRGFGSRSTYG-IRGIRlyVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQ-TG 159
Cdd:PRK10064 86 RKG--VSIRGLDSSYTLIlIDGKR--VNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGsDALGGVVNIITKkIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 160 QQpptieassYYGSFgswryglkatgatgdgtqpgDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRiddasklslIF 239
Cdd:PRK10064 162 QK--------WHGTV--------------------TVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMK---------AY 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 240 NSVDIKADDpggltkAEWKANPQ---QAPRAEQYDTRK-------TIKQTQ---AGLRYERSLSSRDDMSV-----MMYA 301
Cdd:PRK10064 205 GSLAKREKD------DPQNSTTTdtgETPRIEGFTSRDgnvefawTPNQNHdftAGYGFDRQDRDSDSLDKnrlerQNYS 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 302 ---------GERETTQYqsipmAPQLNPSHAGSVITLQRHYQGIDSRWT-HRGELGVPVTFTTGLNYENMSENRKGYNNF 371
Cdd:PRK10064 279 lshngrwdyGNSELKYY-----GEKVENKNPGNSSPITSESNSIDGKYTlPLTAINQFLTFGGEWRHDKLSDAVNLTGGT 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 372 RLNSGMPEYGQkgelrrdernlmwnidpYLQTQWQLSEKLSLDAGVRYssvwfdsnDHYVTPGNgddsgdasyhKWLPAG 451
Cdd:PRK10064 354 SSKTSASQYAL-----------------FVEDEWRIFEPLALTTGVRM--------DDHETYGD----------HWSPRA 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 452 SLKYAMTDAWNIYLAAGRGFETPTINELSyrADGQSGMNFG---------LKPSTNDTIEIGSKTRIGDGLL-----SLA 517
Cdd:PRK10064 399 YLVYNATDTVTVKGGWATAFKAPSLLQLS--PDWTSNSCRGackivgspdLKPETSESWELGLYYMGEEGWLegvesSVT 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 518 LFQTDTDDEIVVDSSS----------------GGRTT------YKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDAty 575
Cdd:PRK10064 477 VFRNDVDDRISISRTSdvnaapgyqnfvgfetNGRGRrvpvfrYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDG-- 554
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 576 rSNVCNEQDCNGNRMPgiaRNMGFASIGYVPE--DGWYAGMEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHnltV 653
Cdd:PRK10064 555 -RDVSNGENKPLSDLP---FHTANGTLDWKPLalEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKD---V 627
|
730 740
....*....|....*....|....*....
gi 15831309 654 DLFGRVDNLFDKEYV-GSVIVNESNGRYY 681
Cdd:PRK10064 628 KLRAGVLNLGDKDLSrDDYSYNEDGRRYF 656
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
42-151 |
2.76e-23 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 95.03 E-value: 2.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 42 DTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQNYAQDlQLSIRGFGSRSTygirgiRLYVDGIPATMP-DGQG 120
Cdd:pfam07715 4 DTPGSVSVVTAEDIE-DQGATNLADALRGVPGVSVSSGGGGGGS-SISIRGFGSNRV------LVLVDGVPLNSGgGGSV 75
|
90 100 110
....*....|....*....|....*....|..
gi 15831309 121 QTSNIDLSSVQNVEVLRGPFSALYG-NASGGV 151
Cdd:pfam07715 76 DLNSIDPEDIERVEVLKGPASALYGsGAIGGV 107
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
13-696 |
3.59e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 104.86 E-value: 3.59e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 13 ALLVLSPVVFAADE-----QTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVQ---NRQNyaq 84
Cdd:PRK13483 15 LPAVFVTHALAQAApdktmETVVVTASGYEQQIRDAPASISVITREDLENRFYR-DLTDALLDVPGVVVTgggDRTD--- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 85 dlqLSIRGFGSRSTYgirgirlyvdgipaTMPDGQGQTS-----NID-----------LSSVQNVEVLRGPFSALYG-NA 147
Cdd:PRK13483 91 ---ISLRGMGSQYTL--------------ILVDGKRQSSretrpNSDgpgveqawtppLAAIERIEVIRGPMSSLYGsDA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 148 SGGVMNVTTQ------TG--QQPPTIEASS-----YYGSF---GSWRYGLKATGATGDGTQPGDVDytvsttrfTTHGYR 211
Cdd:PRK13483 154 IGGVINIITRkvpnewQGevRLDTTLQENSdsgnvYQANFfvnGPLIKDLLGLQLYGQYTQREEDD--------IEGGYR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 212 DHSgaQKNLaNAKLGVRIDDASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRA------EQYDtRKTIKQTQAG--- 282
Cdd:PRK13483 226 DKD--ARSL-TAKLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRGcpesstTEYE-RSTVSLSHTGrwd 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 283 -------LRYERSLSSRDDMSVmmyagerETTQYQSIPMAPqLNPSHagsvitlqrhyqgidsrwthrgelgvpvTFTTG 355
Cdd:PRK13483 302 fgtsdtyIQHEEFDNKSREMKI-------KNTDFQSSLVAP-LGQEH----------------------------TLTFG 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 356 LNYENMSENRKGYNnfRLNSgmpeygqkgelRRDERNLMWNIdpYLQTQWQLSEKLSLDAGVRYssvwfDSNDHYvtpgn 435
Cdd:PRK13483 346 AAYNHQDLTDETSN--QISD-----------LTDISRTQWAV--FSEDEWRIADDFALTGGLRL-----DHDENF----- 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 436 GDDSGDASYHKWLPAgslkyamtDAWNIYLAAGRGFETPTINELSyrAD-GQ---SGMNFG---LKPSTNDTIEIGSKTR 508
Cdd:PRK13483 401 GGHVSPRVYGVWNLA--------PSWTVKGGVSTGFRAPSLRQTT--PDwGQvsrGGNIYGnpdLKPETSLNKELGLYYD 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 509 IGDGL-LSLALFQTDTDDEI--VV----------DSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATY 575
Cdd:PRK13483 471 LGSGLtASLTVFYNEFKDKItrVAcpatqctdgpNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDSEQ 550
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 576 RSNvcneqDCNGNRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMADDE----NTAKAPSYTLVGLFTGYKYNYhnl 651
Cdd:PRK13483 551 KSG-----AYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPTTgpssSSFIAPSYTFLDLGANYQLTD--- 622
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 15831309 652 TVDLFGRVDNLFDKEyvgsviVNESNGRYYEpaPGRNYGVGVNIA 696
Cdd:PRK13483 623 NLKLSAGIYNLFDKE------INYEEYGYVE--DGRRYWLGMTYS 659
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
1-694 |
1.02e-22 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 103.18 E-value: 1.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 1 MKIVFVRQTVLPALLVLSPVVFAAdEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVQNRQ 80
Cdd:PRK13486 1 MRITTLASVVIPCLGFSASSIAAA-EDVMIVSASGYEKKLTNAAASVSVISQEELQ-SSQYHDLAEALRSVEGVDVESGT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 81 NYAQDLQLSIRGF-GSRSTYGIRGIRLyvDGIPATMPDGQGQTSN---IDLSSVQNVEVLRGPFSALYG-NASGGVMNVT 155
Cdd:PRK13486 79 GKTGGLEISIRGMpASYTLILIDGVRQ--GGSSDVTPNGFSAMNTgfmPPLAAIERIEVIRGPMSTLYGsDAMGGVVNII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 156 TQ--TGQQPPTIEA------SSYYGS---FGSWRYG--------LKATGATGDgtQPGDVDYTVSTTRFTTHGYRDHSga 216
Cdd:PRK13486 157 TRknADKWLSSVNAglnlqeSNKWGNssqFNFWSSGplvddsvsLQVRGSTQQ--RQGSSVTSLSDTAATRIPYPTES-- 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 217 qknlANAKLGVRID-DASKLSLIFNSVDIKaddpggltkaewkanpqqaprAEQYDTRKTIKQTQAG-----LRYERS-L 289
Cdd:PRK13486 233 ----QNYNLGARLDwKASEQDVLWFDMDTT---------------------RQRYDNRDGQLGSLTGgydrtLRYERNkI 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 290 SSRDDMSVMMYAGERETTQYQSIPMAPQLnpshAGSVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYN 369
Cdd:PRK13486 288 SAGYDHTFTFGTWKSYLNWNETENKGREL----VRSVLKRDKWGLAGQPRELKESNLILNSLLLTPLGESHLVTVGGEFQ 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 370 NFRLNSGMPeYGQKGELRRDERnlmWNIdpYLQTQWQLSEKLSLDAGVRYssvwfdsnDHYVTPGngddsGDASyhkwlP 449
Cdd:PRK13486 364 SSSMKDGVV-LASTGETFRQKS---WSV--FAEDEWHLTDALALTAGSRY--------EHHEQFG-----GHFS-----P 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 450 AGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGM-------NFGLKPSTNDTIEIGSKTRIGDGL-LSLALFQT 521
Cdd:PRK13486 420 RAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGISGVSGQgktnllgNPDLKPEESVSYEAGVYYDNPAGLnANVTGFMT 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 522 DTDDEIVVDSSSGGRTTYKNAGKTRRQGAELA-----WDQrfagDFRVNASWTWLDATYRsnvcnEQDCNGNRMPGIARN 596
Cdd:PRK13486 500 DFSNKIVSYSINDNTNSYVNSGKARLHGVEFAgtlplWSE----DVTLSLNYTWTRSEQR-----DGDNKGAPLSYTPEH 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 597 MGFASIGYVPEDGWYAGMEARYMGDI---------------MADDENTAKAPSYTLVGLFTGYKYNYhnlTVDLFGRVDN 661
Cdd:PRK13486 571 MVNAKLNWQITEEVASWLGARYRGKTprftqnysslsavqkKVYDEKGEYLKAWTVVDAGLSWKMTD---ALTLNAAVNN 647
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 15831309 662 LFDKEYVGSVIVNESN-----GRYYEPA--------PGRNYGVGVN 694
Cdd:PRK13486 648 LLNKDYSDVSLYSAGKstlyaGDYFQTGssttgyviPERNYWMSLN 693
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
23-695 |
3.46e-19 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 92.40 E-value: 3.46e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 23 AADEQTMIVSAAPQVVSELdtpaAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQ---DLQLSIRGFGSRSTY 99
Cdd:PRK13524 35 ASHEDTIVVTAAEQNLQAP----GVSTITAEDIRKRPPANDVSEIIRTMPGVNLTGNSTSGQrgnNRQIDIRGMGPENTL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 100 girgirLYVDGIPATM-----------PDGQGQTSNIDLSSVQNVEVLRGPFSALYGN-ASGGVMNVTTqtgqQPPTIE- 166
Cdd:PRK13524 111 ------ILIDGKPVSSrnsvrygwrgeRDTRGDTNWVPPEMIERIEVLRGPAAARYGNgAAGGVVNIIT----KKPTGEw 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 167 --ASSYYGSF-------GSWRYGLKATGATGDG-----------TQPGDVDYTVSTTRFTTHGYRDhsgaqkNLANAKLG 226
Cdd:PRK13524 181 hgSWNTYFNApehkaegATKRTNFSLSGPLGDElsfrlygnlnkTQADAWDINQGHQSARTGSYAG------TLPAGREG 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 227 VRIDDASKLslifnsvdikaddpggltkAEWKANPQQAPRAEqydtrktikqtqAGlryerslSSRDDmsvMMYAGERET 306
Cdd:PRK13524 255 VINKDINGL-------------------LRWDFAPLQSLELE------------AG-------YSRQG---NLYAGDTQN 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 307 TQYQSIpmapqLNPSHAGSVITLQRHYQGIdsrwTHRGELGVPVTFTTGLNYENMsenrkgyNNFRLNSGM--------- 377
Cdd:PRK13524 294 TNSDAL-----VKSLYGKETNRMYRQNYAL----THRGGWDNGVSTSNYAQYEHT-------RNSRLPEGLaggtegifn 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 378 PEYGQKGELRRDERNLM--WNIdPY---------LQTQW-------QLSEKLSLDAG----------------VRYSSVW 423
Cdd:PRK13524 358 EKATQFSTIDLDDVMLHseVNL-PFdllvnqtltLGTEWnqqrmkdPSSNTQALTSGgaipgvsatgrspyskAEIFSLF 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 424 FDSN-----DHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTI-----NELSY-RADGQSGM--- 489
Cdd:PRK13524 437 AEDNmeltdSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPNLyqtnpNYILYsKGQGCYASagn 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 490 ------NFGLKPSTNDTIEIGSKTRiGDGLL-SLALFQTDTDDEI-----VVDSSSGGRTT---YKNAGKTRRQGAElaw 554
Cdd:PRK13524 517 gcylqgNDDLKAETSVNKEIGLEFK-RDGWLaGLTWFRNDYRNKIeagyvPVGTNSVGKTDiyqWENVPKAVVEGLE--- 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 555 dqrfaGDFRV----NASWTwLDATYrsNVCNEQDCNGNRMPGIARNMGFASIGYVPEDG--------WYAGMEAR---YM 619
Cdd:PRK13524 593 -----GTLNVpvseTVNWT-NNLTY--MLQSKNKTTGDPLSIIPEYTLNSTLSWQATEDlslqstftWYGKQKPKkynYK 664
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 620 GDIMADDENTAKAPsYTLVGLFTGYKYNYHnltVDLFGRVDNLFDKEY--------VGSVIVNESNGRYYEpaPGRNYGV 691
Cdd:PRK13524 665 GQPVTGSATKEVSP-YSIVGLSATYDVTKN---VSLTGGVDNLFDKRLwregnaqtTGDLIAGAGAYTYNE--PGRTYYM 738
|
....
gi 15831309 692 GVNI 695
Cdd:PRK13524 739 SLNT 742
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-694 |
8.48e-19 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 90.98 E-value: 8.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 1 MKIVFVRQTVLPALLVLSPV-VFAADEQTMIVSAA--PQVVSelDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVQ 77
Cdd:PRK13513 9 HKAALVIAAAISSQAYAAEKtNTATPTDTMVVTASgfQQRIQ--DAPASISVVTREQLENKAYR-DVTDALKDVPGVVVT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 78 NRqnyAQDLQLSIRGFGSRSTYgirgirLYVDG----IPATMPDGQGqtSNID------LSSVQNVEVLRGPFSALYG-N 146
Cdd:PRK13513 86 GG---GSTSDISIRGMAAKYTL------ILVDGkrvdTRSTRPNSDG--SGIEqgwlppLAAIERIEVVRGPMSSLYGsD 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 147 ASGGVMNVTTQTGQQpptieassyygsfgSWRYGLKATGATGDGTQPGDVdytvsttrFTTHGYRdhSGAqknLANAKLG 226
Cdd:PRK13513 155 AMGGVINIITRKVQK--------------EWHGSLRADATLQEDSKSGDI--------FQTNAYA--SGP---LIDGLLG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 227 VRID------DASKLSLIFNSVDIKaddpGGLTKAEWKANPQQ-----APRAEQyDTRKTIKQTQAGL------RYER-- 287
Cdd:PRK13513 208 LKVSgllshrSEDKIIDGYNEQRMR----NGTATFSLTPDDNNefdfeIGRYVQ-DRNSTPGRTLALNgtnsdtQYDRnn 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 288 -SLS---SRDDMSVMMYAgERETTQYQSIPMAPQLNPSHAGSVITLQRHYqgidsrwthrgelgvpVTFTTGLNYENMSE 363
Cdd:PRK13513 283 yAIThngYYDFGNSTSYI-QRDETRNPSRQMKSVDTIFNTQTSFLLDDHT----------------LSLGGQYRYEELYD 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 364 NrkgynnfrlNSGMPEYGQKGELRRdernlmWNIDPYLQTQWQLSEKLSLDAGVRYssvwfDSNDHYVTpgngddsgdas 443
Cdd:PRK13513 346 K---------GNQLPSASDLNKLTR------WSWALFAEDEWQMTNDFALTGGIRM-----DQDQNYGT----------- 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 444 yhKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYR------ADGQSGMNFG---LKPSTNDTIEIGSKTRIGDGL- 513
Cdd:PRK13513 395 --HWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATDNwgqltgGGGLPALILGnsdLKPEKSISQEIGILWDNQENLn 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 514 LSLALFQTDTDDEI----VVDSSSG------GRTTYK------NAGKTRRQGAE--LAWDqrFAGDFRVNASWTWLDATY 575
Cdd:PRK13513 473 ASVTLFNTDFKDKItevrNCDTTNTdgqcvfNGINYDfisdriNVDKANMRGVEatFNWD--INQAWSLATNYTFTQSEQ 550
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 576 RSNVCNEQDCngNRMPgiaRNMGFASIGY--VPE-DGW----YAGMEARYMGDI-MADdentaKAPSYTLVGLFTGYKYN 647
Cdd:PRK13513 551 KSGAFAGQPL--NQMP---KHMANATLNWqtTEDfATWirinYRGKTSEYLNRTsMGS-----GTPSYTFVDLGASYQLT 620
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 15831309 648 YHnltVDLFGRVDNLFDKEyvgsvIVNESNGRYYEpapGRNYGVGVN 694
Cdd:PRK13513 621 KE---LRLMGGVYNLLDKR-----VDIDVNDKVLD---GRRYMVGAS 656
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
479-685 |
1.53e-15 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 80.62 E-value: 1.53e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 479 LSYRADGQSGMNFGLKPSTNDTIEIGSKTRIGDG--LLSLALFQTDTDDEIVVDSSSggrtTYKNAGKTRRQGAELAWDQ 556
Cdd:PRK09840 548 LAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKrlLLTAALFRTDIENEVEQNDDG----TYSQYGKKRVEGYELSVAG 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 557 RFAGDFRVNASWTWLDATYRSNVCNEQDcNGNRMPGIARNMGFASIGYVPEDGWYAGMEARYMGDIMADDENTAKAPSYT 636
Cdd:PRK09840 624 NITPAWQVIAGYTQQKATVKNGKDVAQD-GSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFT 702
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 15831309 637 ----LVGLFTGYKYNYHnltVDLFGRVDNLFDKEYVGSviVNESNGRYYEPAP 685
Cdd:PRK09840 703 egywVADAKLGYRVNRN---LDLQLNVYNLFDTDYVAS--INKSGYRYHPGEP 750
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
44-670 |
1.65e-15 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 80.62 E-value: 1.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 44 PAAVSVVDGEEM--RLATPRINlsESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirgiRLYVDGIPaTMPDGQGQ 121
Cdd:PRK14050 80 PQSVSVVGRQEMddRGVTNKVD--EALRYTPGVLSQPFGTDGDTDWFYIRGFDATQT------GVFLDGLN-LFSYGFGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 122 TSnIDLSSVQNVEVLRGPFSALYGNAS-GGVMNVTTQTGQQPPTieassYYGSFGSWRYGLKATG-ATGDG-TQPGDVDY 198
Cdd:PRK14050 151 FQ-IDPFMLERVEVLKGPASVLYGGSNpGGIVNMVSKRPLDEPL-----YYTEIGINSYGNAFTGfDVGDKlSDDGTVRY 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 199 TVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSL--IFNSVDIKADDPGGL------TKAEWKANPQQAPRAEQY 270
Cdd:PRK14050 225 RVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVygYLSGLDQVHVGNGFLpyvgtvVDAPFGKIDRDAFYGEPD 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 271 DTRKTIKQTQAGLRYERSLSSRDDMSVMMYAG---ERETTQY------------QSIPMAPQLNP---SHAGSVITLqrh 332
Cdd:PRK14050 305 IDNGSYAQQMLGYEFSHEFDNGWTFSQNARYGhlhKHEKGPYtygyvggatglpDPTGPDYMLNRigfEHRSKVDSF--- 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 333 yqGIDSRWTHRGELG-VPVTFTTGLNYENmsenrkgynnFRLN-----------SGM-PEYGQ---------KGELRRDE 390
Cdd:PRK14050 382 --SIDNRLEGEFDTGaLTHNLLFGLDYKY----------YRLDqvqaccgatpiSATnPVYGTtqganfvylDQILTQQQ 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 391 rnlmwnIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHyVTPGNGDDSGDASYHkwlpAGsLKYAMTDAWNIYLAAGRG 470
Cdd:PRK14050 450 ------IGIYAQDQIRFGDGWLVTLNGRYDYVDTDSDAR-IGTSYESNDGALSGR----AG-LAYEFDNGLTPYVSAATF 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 471 FeTPTInelsyradGQSGMNFGLKPSTNDTIEIGSKTR--IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYknaGKTRRQ 548
Cdd:PRK14050 518 F-NPLV--------GTLASGPPLKPEEGEQYEAGIKYEpsFIDGLITASVFQITKKNVTVTDPLTFASTQL---GEVRSR 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 549 GAELAWDQRFAGDFRVNASWTW--LDATYRSNvcneQDCNGNRMPGIARNMGFASIGYVPEDGWYAGME----ARYMGDI 622
Cdd:PRK14050 586 GFELEGKVNLDDNWKALASFTYtdLEITEDAN----PSLIGNSPYLVPETQASLWLDYAVTDGAFEGVSlgagVRYQGES 661
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 15831309 623 MADDENTAKAPSYTLVGLFTGYKYNyhNLTVDLfgRVDNLFDKEYVGS 670
Cdd:PRK14050 662 WADEANTLKVPAATLFDAAIRYEKN--DWGASL--NVANLFDKEYVAG 705
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
26-635 |
2.26e-15 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 80.05 E-value: 2.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 26 EQTMIVSAAPQVVSELDTPAAVSVVDGEEMRlATPRINLSESLTGVPGLQVqNRQNYAQDLqlSIRGFGSRSTYgirgir 105
Cdd:PRK13484 30 EDTLVVTASGFTQQLRNAPASVSVITSEQLQ-KKPVSDLVDAVKDVEGISI-TGGNEKPDI--SIRGLSGDYTL------ 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 106 LYVDGIPA----TMPDGQG--QTSNID-LSSVQNVEVLRGPFSALYG-NASGGVMNVTTQtgqqPPTIEassyygsfgSW 177
Cdd:PRK13484 100 ILVDGRRQsgreSRPNGSGgfEAGFIPpVEAIERIEVIRGPMSSLYGsDAIGGVINIITK----PVNNQ---------TW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 178 RYGLKATGATGDGTQPGDvdytvsttrfTTHGYRDHSGAqknLANAKLGVRIddasklsliFNSVDIKADDpggltkaew 257
Cdd:PRK13484 167 DGVLGLGGIIQEHGKFGN----------STTNDFYLSGP---LIKDKLGLQL---------YGGMNYRKED--------- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 258 kanpqqapRAEQYDTRKTIKQTQAGLRYerslSSRDDMSVMMYAGeRETTQYQSIPMAPQLNPSHAGSVITLQRHYQGID 337
Cdd:PRK13484 216 --------SISQGTPAKDNKNITATLQF----TPTESQKFVFEYG-KNNQVHTLTPGESLDAWTMRGNLKQPNSKRETHN 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 338 SR------WTHRGELGVP--VTFTTGLNYENMSENRKGYNNFRLN--SGMPE--------------------YG---QKG 384
Cdd:PRK13484 283 SRshwvaaWNAQGEILHPeiAVYQEKVIREVKSGKKDKYNHWDLNyeSRKPEitntiidakvtaflpenvltIGgqfQHA 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 385 ELRRDE-------RNLMWNIDP---YLQTQWQLSEKLSLDAGVRyssvwFDSNDHYvtpgngddsgdASYhkWLPAGSLK 454
Cdd:PRK13484 363 ELRDDSatgkkttETQSVSIKQkavFIENEYAATDSLALTGGLR-----LDNHEIY-----------GSY--WNPRLYAV 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 455 YAMTDAWNIYLAAGRGFETPTINELS--YRADGQSGM-----NFGLKPSTNDTIEIGSKTRIGDGL-LSLALFQTDTDDE 526
Cdd:PRK13484 425 YNLTDNLTLKGGIAKAFRAPSIREVSpgFGTLTQGGAsimygNRDLKPETSVTEEIGIIYSNDSGFsASATLFNTDFKNK 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 527 IV------VDSSSGGRT-TYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSnvcNEQDCNGNRMPG-----IA 594
Cdd:PRK13484 505 LTsydigtKDPVTGLNTfIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRKS---DDESLNGKSLKGeplerTP 581
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 15831309 595 RNMGFASI--GYVPEDGWYAGMEarYMG-DIMADDENTAKAPSY 635
Cdd:PRK13484 582 RHAANAKLewDYTQDITFYSSLN--YTGkQIWAAQRNGAKVPRV 623
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
2-670 |
4.33e-15 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 79.03 E-value: 4.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 2 KIVFVRQTVLPALLVLSPVVFAADEQTMIVSAAPQ------------------VVSELDT-----PAAVSVVDGEEMRLA 58
Cdd:PRK10044 15 KIAVVVATAVSGMSVYAQAAVEPKEETITVTAAPApqesawgpaatiaakrsaTGTKTDTpiektPQSISVVTAEEMALH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 59 TPRiNLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTygirGIRLYVDGIPAtmpdgQGQTSN---IDLSSVQNVEV 135
Cdd:PRK10044 95 QPK-SVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQ----SQNNYLDGLKL-----QGNFYNdavIDPYMLERAEL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 136 LRGPFSALYGNAS-GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpgdvdyTVSTTRFTthGYRDHS 214
Cdd:PRK10044 165 MRGPVSVLYGKSNpGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDD--------GVYSYRLT--GLARSA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 215 GAQKNLANAK-------LGVRIDDASKLSLIFNSvdikADDP-----GGLTKaEWKANPqqAPRAEQYDT-------RKT 275
Cdd:PRK10044 235 NAQQKGSEEQryaiapsFTWRPDDKTNFTFLSYF----QNEPetgyyGWLPK-EGTVEP--LPNGKRLPTdfnegakNNT 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 276 IKQTQAGLRYERSLSSRDDMSV---MMYAgeRETTQYQSI-------PMAPQLNPSHAGSVITLQRHyqGIDSRWTHRGE 345
Cdd:PRK10044 308 YSRNEKMVGYSFDHEFNDTFTVrqnLRYA--ENKTSQRSVygygvcsDKGHYLNRGYVVDDEKLQNF--SVDTQLQSKFA 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 346 LG-VPVTFTTGLNYENMsenRKGYN-NFRLNSGMPEYGQKGELRRDeRNLMWNIDPYL--------------QTQWqlsE 409
Cdd:PRK10044 384 TGdVDHTLLTGVDFMRM---RNDINaWFGYADSVPLLNLYGPVNTD-FDFNANSGPYQilnkqkqtglyvqdQAEW---D 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 410 KLSLDAGVRYSsvWFDSNDHYVTPGNGDDSGDASYhKWlpAGSLKYAMTDAWNIYLAAGRGFEtPTinelsyRADGQSGM 489
Cdd:PRK10044 457 KWLVTLGGRYD--WADQSSLNRVNGTTDKRDDKQF-TW--RGGVNYLFDNGITPYFSYSESFE-PS------SGTGKDGN 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 490 NFglKPSTNDTIEIGSKTRIGDGL--LSLALFQTDTDDEIVVDSSsgGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNAS 567
Cdd:PRK10044 525 IF--APSKGKQYEAGVKYVPKDRPivVTGAVYQLTKTNNLTADPE--NSFFSVQGGEIRARGVELEAKAALSANVNVTGS 600
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 568 WTWLDATYRSNVCNEqdcnGNRMPGIARNMGFASIGYVPEDGWYAGME----ARYMGDIMADDENTAKAPSYTLVGLFTG 643
Cdd:PRK10044 601 YTYTDAEYTTDTTYK----GNTPAQVPKHMASLWADYTFFDGPLSGLTlgtgGRYTGSSYGDPANSFKVGSYTVVDALVK 676
|
730 740
....*....|....*....|....*...
gi 15831309 644 YKYNYHNLTVDLFG-RVDNLFDKEYVGS 670
Cdd:PRK10044 677 YDLARFGMAGSSVAlNVNNLFDREYVAS 704
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
45-699 |
4.41e-14 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 75.83 E-value: 4.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 45 AAVSVVDG---EEMRlATPRINLSESLTGVPGLQVQNRQNYAQdlQLSIRGFGSRSTygirgiRLYVDGIPATMPDGQGQ 121
Cdd:TIGR01782 22 DADSVVDVisaEDIG-KLPDVNVAEALQRVPGVSIERDQGEGR--YVSVRGLGPSYN------RTTLNGRTIASTDSGGR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 122 TSNIDL---SSVQNVEVLRGPFSALYGNASGGVMNVTTQT--------------GQQPPTIEASSYYGSFG---SWRYGL 181
Cdd:TIGR01782 93 AFSLDLlpsELVSGVEVYKTPTADMDEGGIGGTVDLRTRSpfdydgrtlsgsaqGGYNDLAGKDKPGPRGAasySWTFGD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 182 KATGATGDGTQpGDVDY---TVSTTRFTT----------------HGYRDHSGAQKNL-ANAKLGVRIDDASKLSLIFNS 241
Cdd:TIGR01782 173 GQFGVLLSASY-QKRDFaedNVETENWGTytsadggaqglyfprgVRYRSYRNDRERKgVNGSLQWRPSDALELYLDTLY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 242 VDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQ-AGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNP 320
Cdd:TIGR01782 252 SKYDDDETRQQIEFRTLNGGSTVITSNQTATSGALVQGTvANLQILVEARYNEEKETTTSLTLGGEWTGDRWTLDGDLGY 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 321 SHA-------------------------GSVITLQRHYQGID-SRWTHRGEL--------------------------GV 348
Cdd:TIGR01782 332 SKAtrdrpdrvtrfftaptpgydfdyrgGPTLTLGTPADGDDaSNYTNPANGelrrtqisyqkaedsedaaqldatfdGP 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 349 PVTFTTGLNYENMSENRKGYNNFRLN---------SGMPEYGQKGELRRDERNLMWNIDP-------------------- 399
Cdd:TIGR01782 412 FTSLKFGVRYRRRDKTNRGSRYRRSIigatgasglAGVPSDLAGAGLDGGLGGPLTGWDPadldaflnaargdaagggty 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 400 -------------------YLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNG-------DDSGDASYHKWLPAGSL 453
Cdd:TIGR01782 492 tyastapntytvtedttaaYAMANFDTGLRLRGNVGVRYERTDQTSDGWQSQPAANgtgsvlvPVSADRDYTDVLPSLNL 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 454 KYAMTDAWNIYLAAGRGFETPTINELS-------YRADGQSGMNFG---LKPSTNDTIEIGSKTRIGD-GLLSLALFQTD 522
Cdd:TIGR01782 572 AYDLTDDLVLRFAASKTITRPDFGDLAantslsdDGTGGTVTVSGGnpdLKPYESDNLDLSLEWYFGPgGLLSAAVFYKD 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 523 TDDEIV----VDSSSGGR---------TTYKNAGKTRR-QGAELAWDQRFAG------DFRVNASWTWLDATYRSNVCNE 582
Cdd:TIGR01782 652 IKNFIVtttsTETNDGGGglvvagvlvSRPVNGGKAGKiRGVELGYQQTFDFlpgplsGFGVQANYTYVDSEADPSVDGV 731
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 583 QDcNGNRMPGIARNMGFASIGYvPEDGWYAGMEARYMGDIM--ADDENTAKAP----SYTLVGLFTGYKYNYHnltVDLF 656
Cdd:TIGR01782 732 QR-RKLPLPGLSKNTANATLYY-EKGGFSARLSYNYRSDYLldVGGSNINRLDryvdPRGQLDLSASYQVSDH---LSLG 806
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 15831309 657 GRVDNLFDKEYVgSVIVNESNGRYYEpAPGRNYGVGVNiaWRF 699
Cdd:TIGR01782 807 LQASNLTNEPSR-WYTGGKQRPREYV-ETGRTYMLGLR--YKF 845
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
41-665 |
1.41e-11 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 67.62 E-value: 1.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 41 LDTPAAVSVVDGEEMRLATPRiNLSESLTGVPGLQVqnrqnyaqdlqlSIRGFGSR-STYGIRGIRLYVDGI---PATMP 116
Cdd:PRK14049 77 LETPQSISSVTEQQLKDRNPQ-TLLETLAYTPGARV------------GAFGFDPRfDAFFVRGFDVTYTGVfrdNLRQP 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 117 DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGtqpGD 195
Cdd:PRK14049 144 GASSSIFKTEPYGLEGVSILRGPSSALYGaSGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNET---DP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 196 VDYtvsttRFTTHGyRDHSGAQKNLANAKLGV------RIDDASKLSLIFNSVDIKAddpGGltKAEWKANPQQAPRAEQ 269
Cdd:PRK14049 221 VYY-----RLTGLL-RDADTEQVGVPDDRAYIapaftwKPDEDTRLTVLGEYSRTKT---GG--TAAYYNDPLTGEVTDI 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 270 YD-----TRKTIKQTQAGLRYERSLSS----RDDMSV-MMYAGERETTQYQSIPMAPQLNPSHAGSVITLQRHYQgIDSR 339
Cdd:PRK14049 290 FAgnpafNDSVQKQGRIGYEFEHRLNDtfvfRQNARVsTLNIDADWAFAYAPNAADPTLLDSSAGTYDERLTAFV-IDNQ 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 340 WTHRGELG-VPVTFTTGLNYENM---SENRKGYNNfRLNSGMPEYGQKGE---LRRDERNLMWNIDPYLQTQWQLsEKLS 412
Cdd:PRK14049 369 LEAKFDTGaFEHTLLAGVDYTKLrfrALNGRGVSP-PLDTKNPTQGRPVAaidFSTRTVQDQWQLGTYLQDQIRY-DAWT 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 413 LDAGVRYSSVWFDSNDHYVTPgngDDSGDASYHKWLPAGSLKYAMTDAWNIylaagrgfeTPTIN---ELSYRADGQSGM 489
Cdd:PRK14049 447 LTAGGRYDWVSTDTDTTDLAT---DSLTTVSQKDKEFSGRIGLTYETDFGL---------APYISystAFSPNAGFNRAT 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 490 NFGLKPSTNDTIEIGSKTRI--GDGLLSLALFQTDTDDEI---VVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRV 564
Cdd:PRK14049 515 NQPFKPTESEQQEVGVKYLLpnSNTLITAALFNIDQTNGLyyeVVFLAAGPTNIQVQRGKLRSRGFELEANTSLDNGLSL 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 565 NASWTWLDATYRSNVcneQDCNGNRMPGIARNMGFASIGY-VPEDGWYAGME----ARYMGDIMADDENTAKAPSYTLVG 639
Cdd:PRK14049 595 IASYTYTDVKIIQGP---EGTIGNEVSSVPNHMASAWAHYtLPEGGPLYGLGlgagARFVGSSYGNDQNTFKNSSRVLFD 671
|
650 660 670
....*....|....*....|....*....|.
gi 15831309 640 LFTGYKY-----NYHNLTVDLfgRVDNLFDK 665
Cdd:PRK14049 672 ASVGYDFaaidkKYEGLMLQV--NATNLFDR 700
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
9-693 |
4.48e-10 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 62.85 E-value: 4.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 9 TVLPALLVL-----SPVVFAA-----DEQTMIVSAAPQvvSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQN 78
Cdd:PRK13528 7 KILWLLTVLlvglnSPVSAAEssdddNGETMVVEATAE--QELKQQPGVSIITAEDIKKRPPVNDLSDIIRKMPGVNLTG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 79 RQ---NYAQDLQLSIRGFGSRSTYgirgirLYVDGIPATMP-----------DGQGQTSNIDLSSVQNVEVLRGPFSALY 144
Cdd:PRK13528 85 NSasgTRGNNRQIDIRGMGPENTL------ILIDGVPVTSRnsvryswrgerDTRGDTNWVPPEMVERIEVIRGPAAARY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 145 GN-ASGGVMNVTTQTGQQPPTIEASSYYGS------FGSWRYGLKATGA-TGDGTQP---GDVDYTVSTTRFTTHGYRDH 213
Cdd:PRK13528 159 GSgAAGGVVNIITKRPTNDWHGSLSLYTNQpesskeGATRRANFSLSGPlAGDALTMrlyGNLNKTDADSWDINSSAGTK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 214 SGAQKNlanaklGVRIDDASKLslifnsvdikaddpggltkAEWKANPQQApraeqydtrktikqtqagLRYERSLSSRD 293
Cdd:PRK13528 239 NAAGRE------GVRNKDINGV-------------------LSWKMTPQQI------------------LDFEAGYSRQG 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 294 DmsvmMYAGERETTQYQSIPMApqLNPSHAGSVITLQRHYqGIdsrwTHRG--ELGvpvTFTTGLNYENMsenrkgyNNF 371
Cdd:PRK13528 276 N----IYAGDTQNSNSSAVTES--LAKSGKETNRLYRQNY-GL----THNGiwDWG---QSRLGFYYEKT-------NNT 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 372 RLNSGM---PE----------------YGQKGEL------------------RRDERNlmwniDPYLQTQWQLSEKL--- 411
Cdd:PRK13528 335 RMNEGLaggGEgritadqtfttsrlesYRTSGELnvplnwlfeqtltvgaewNRDELN-----DPSSTSLTVKDGDIggi 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 412 SLDAGVR-------YSSVWFDSNDHY-----VTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTI--- 476
Cdd:PRK13528 410 SGSAADRssknkseISALYVEDNIEPvpgtnLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLyqs 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 477 --NELSY-RADG-QSGMNFG---------LKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTT----- 538
Cdd:PRK13528 490 seGYLLYsRGNGcPKDITSGgcylvgnknLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIVAGDDVIGRTAsgayi 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 539 --YKNAGKTRRQGAE------LAWDQRfagDFRVNASWTwldatyrsnVCNEQDCNGNRMPGIARNMGFASIGYVPEDGW 610
Cdd:PRK13528 570 lqWQNGGKAVVEGLEgnllvpLMKDRL---NWNTNATYM---------ITSEQKDTGNPLSVIPKYTINSTLDWQITQAL 637
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 611 --------YAGMEARYMGDIMADDENTA---KAPSYTLVGLFTGYKYNyHNLTVDlfGRVDNLFDKEyvgsvIVNESNG- 678
Cdd:PRK13528 638 sanvnwtlYGKQKPRTHAESRSEETGGLsgkELGAYSLVGVNVNYDIN-KNLRLN--VGVSNLFDKQ-----IYREGEGa 709
|
810
....*....|....*.
gi 15831309 679 -RYYEpaPGRNYGVGV 693
Cdd:PRK13528 710 nTYNE--PGRAYYAGV 723
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
14-667 |
9.66e-09 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 58.47 E-value: 9.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 14 LLVLSPVVFAADEQ-----TMIVSAA--PQVVSELDTPaaVSVVDGEEMRLATPRiNLSESLTGVPGLQVQNRQNYAQDL 86
Cdd:PRK10641 8 LTALSVTAFSGWAQdtspdTLVVTANrfQQPVSTVLAP--TTVVTRDDIDRWQSK-SVNDVLRRLPGVDIAQNGGLGQLS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 87 QLSIRGFGSRSTYgirgirLYVDGIPATMP--DGQGQTSNIDLSSVQNVEVLRGPFSALYG-NASGGVMNVTTQTGQQPP 163
Cdd:PRK10641 85 SLFIRGTNSSHVL------VLIDGVRLNQAgiSGSADLSQIPISLVQRIEYIRGPRSAVYGsDAIGGVVNIITTRDKPGT 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 164 TIEA---SSYYGSF-GSWRYGL-KATGATGDGtqpgdvDYTvsttrfTTHGYrdHSGAQKNLANAKLGVRIDDASKlsLI 238
Cdd:PRK10641 159 TLSAgwgSNGYQNYdGSTQQQLgDNTRVTLAG------DYT------YTKGF--DVVAYGNTGTQAQPDRDGFMSK--TL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 239 FNSVDIKADDP--------GGLTKAEWKAnpQQAPRAEQYDTRKTIKQT-QAGLRYerslsSRDDMSVMMYAGERETTQY 309
Cdd:PRK10641 223 WGGLEHQFNDQwsgfvrgyGYDNRTDYDA--YYSPGSPLIDTRQLYSQSwDAGLRY-----NGGIYSSQLIASYSHSKDY 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 310 QsipMAPQLNPSHAGSviTL----QRHYQgidsrWTHRGELGVPvTFTTGLNYENMsenrkgynnfRLNSGmPEYGQKGE 385
Cdd:PRK10641 296 N---YDPHYGRYDSSA--TLddmkQYNVQ-----WGNTVQVGHG-NISAGVDWQKQ----------TTTPG-TGYVPDGY 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 386 LRRdernlmwNIDPYLQTQWQLSEkLSLDAGVRyssvwfdsndhyvtpgnGDDSGDASYH-KWLPAGSLKYamTDAWNIY 464
Cdd:PRK10641 354 DQR-------NTGIYLTGQQQIGD-VTLEGAAR-----------------SDDNSQFGWHgTWQTSAGWEF--IDGYRFI 406
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 465 LAAGRGFETPTINELsYRADGqsgmNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGgrtTYKNAGK 544
Cdd:PRK10641 407 ASYGTAFKAPNLGQL-YGFYG----NPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIDYDDHTL---KYYNVGK 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 545 TRRQGAElaWDQRF-AGDFRVNASWTWLDAtyrsnvcnEQDCNGNRMPGIARNMGFASIGYVPED-GW---YAGMEARYM 619
Cdd:PRK10641 479 ATIKGVE--WTGNFdTGPLTHQVTLDYVDP--------RNAITDEPLARRAKQQVKYQLDWQLYDfDWgvtYQYLGTRYD 548
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 15831309 620 GDIMADDENTAKAPSYTLVGLFTGYKYNYHnLTVDlfGRVDNLFDKEY 667
Cdd:PRK10641 549 KDYSTYPYQTVKLGGVSLWDLAVSYPVTSH-LTVR--GKIANLFDKDY 593
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
410-584 |
3.57e-05 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 46.88 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 410 KLSLDAGVRYSSVWFDSNDHyvtpgNGDDSGDASYHKWLPAGSLKYAMTDA--WNIYLAAGRGFETPTINELS---YRAD 484
Cdd:pfam14905 127 KWSYQAGLRAEYTDIDGDSV-----TTNETFKRNYFNLFPSASLSYKLNDNnsLQLSLYYRRIINRPSYWDLNpfrNYSD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15831309 485 GQS---GmNFGLKPSTNDTIEIGSKTRIGdglLSLALF---QTDTDDEIVVDSSSGG--RTTYKNAGKTRRQGAELAWDQ 556
Cdd:pfam14905 202 PYNysqG-NPNLKPEYTNSFELGYTYKWK---LSLSLSyryTNDVIQQTFITDDNDNvtYTTYENLGKSNSYGLELSASF 277
|
170 180
....*....|....*....|....*...
gi 15831309 557 RFAGDFRVNASWTWLDATYRSNVCNEQD 584
Cdd:pfam14905 278 NPTKWWSLNGNLNGYYNKYKIDGSLNSD 305
|
|
| |
