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Conserved domains on  [gi|15832023|ref|NP_310796|]
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hypothetical protein ECs_2769 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1482 super family cl06412
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-51 3.80e-13

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07358:

Pssm-ID: 369331  Cd Length: 57  Bit Score: 57.06  E-value: 3.80e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 15832023    4 AFALVMTVFLITGESQNVITGIYASKESCLQARDEQKIS-GECLPVKKV 51
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIRnGGCYPIEDV 49
 
Name Accession Description Interval E-value
DUF1482 pfam07358
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-51 3.80e-13

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 369331  Cd Length: 57  Bit Score: 57.06  E-value: 3.80e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 15832023    4 AFALVMTVFLITGESQNVITGIYASKESCLQARDEQKIS-GECLPVKKV 51
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIRnGGCYPIEDV 49
 
Name Accession Description Interval E-value
DUF1482 pfam07358
Protein of unknown function (DUF1482); This family consists of several Enterobacterial ...
 4-51 3.80e-13

Protein of unknown function (DUF1482); This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.


Pssm-ID: 369331  Cd Length: 57  Bit Score: 57.06  E-value: 3.80e-13
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 15832023    4 AFALVMTVFLITGESQNVITGIYASKESCLQARDEQKIS-GECLPVKKV 51
Cdd:pfam07358  1 MFALVLTVCYLGGGCQDLVVGVYNTEQQCLAAMEEQKIRnGGCYPIEDV 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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