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Conserved domains on  [gi|15832224|ref|NP_310997|]
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hypothetical protein ECs_2970 [Escherichia coli O157:H7 str. Sakai]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF826 super family cl05321
Protein of unknown function (DUF826); This family consists of several enterobacterial and ...
 1-75 2.18e-19

Protein of unknown function (DUF826); This family consists of several enterobacterial and siphoviral sequences of unknown function.


The actual alignment was detected with superfamily member pfam05696:

Pssm-ID: 368563  Cd Length: 65  Bit Score: 73.89  E-value: 2.18e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832224    1 MSEITSLVTAEAVKEVLRSEEVRSALKQKLRHNLEARLDAEVDAILDELLGAPAapepegiageGSASDSGDPTP 75
Cdd:pfam05696  1 MSEIKSLVTADLVKEALRSEEVRSALKQQLRQDLESQIDAEVDAILAELLGVPA----------GSASDGGEPTP 65
 
Name Accession Description Interval E-value
DUF826 pfam05696
Protein of unknown function (DUF826); This family consists of several enterobacterial and ...
 1-75 2.18e-19

Protein of unknown function (DUF826); This family consists of several enterobacterial and siphoviral sequences of unknown function.


Pssm-ID: 368563  Cd Length: 65  Bit Score: 73.89  E-value: 2.18e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832224    1 MSEITSLVTAEAVKEVLRSEEVRSALKQKLRHNLEARLDAEVDAILDELLGAPAapepegiageGSASDSGDPTP 75
Cdd:pfam05696  1 MSEIKSLVTADLVKEALRSEEVRSALKQQLRQDLESQIDAEVDAILAELLGVPA----------GSASDGGEPTP 65
 
Name Accession Description Interval E-value
DUF826 pfam05696
Protein of unknown function (DUF826); This family consists of several enterobacterial and ...
 1-75 2.18e-19

Protein of unknown function (DUF826); This family consists of several enterobacterial and siphoviral sequences of unknown function.


Pssm-ID: 368563  Cd Length: 65  Bit Score: 73.89  E-value: 2.18e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832224    1 MSEITSLVTAEAVKEVLRSEEVRSALKQKLRHNLEARLDAEVDAILDELLGAPAapepegiageGSASDSGDPTP 75
Cdd:pfam05696  1 MSEIKSLVTADLVKEALRSEEVRSALKQQLRQDLESQIDAEVDAILAELLGVPA----------GSASDGGEPTP 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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