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Conserved domains on  [gi|15832420|ref|NP_311193|]
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NADH-quinone oxidoreductase subunit H [Escherichia coli O157:H7 str. Sakai]

Protein Classification

NADH-quinone oxidoreductase subunit H( domain architecture ID 10012656)

NADH-quinone oxidoreductase subunit H (NuoH) is part of the connecting domain of complex I of the respiratory chain that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

EC:  1.6.5.9
Gene Ontology:  GO:0048038|GO:0016655|GO:0005886
PubMed:  23417064|24059520

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-319 6.33e-167

NADH-quinone oxidoreductase subunit NuoH;


:

Pssm-ID: 235692  Cd Length: 322  Bit Score: 466.98  E-value: 6.33e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    1 MSWISPELIeiLLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR 80
Cdd:PRK06076   1 MSLFGPDLL--LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADK 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   81 VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL 160
Cdd:PRK06076  79 VLFLLAPVIAFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  161 GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG 240
Cdd:PRK06076 159 GLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  241 EYIGIVTISALMVTLFFGGWQGPL-----LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:PRK06076 239 EYINMILVSALITTLFLGGWLPPFplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318

                 ....
gi 15832420  316 TAAV 319
Cdd:PRK06076 319 TAAV 322
 
Name Accession Description Interval E-value
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-319 6.33e-167

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 466.98  E-value: 6.33e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    1 MSWISPELIeiLLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR 80
Cdd:PRK06076   1 MSLFGPDLL--LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADK 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   81 VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL 160
Cdd:PRK06076  79 VLFLLAPVIAFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  161 GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG 240
Cdd:PRK06076 159 GLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  241 EYIGIVTISALMVTLFFGGWQGPL-----LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:PRK06076 239 EYINMILVSALITTLFLGGWLPPFplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318

                 ....
gi 15832420  316 TAAV 319
Cdd:PRK06076 319 TAAV 322
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-324 3.14e-159

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 447.65  E-value: 3.14e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   1 MSWIspeLIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR 80
Cdd:COG1005   1 MSLL---LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADK 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  81 VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL 160
Cdd:COG1005  78 FLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 161 GLSLMGVVAQAGSFNMTDIVNSQA-HVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFV 239
Cdd:COG1005 158 GLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFL 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 240 GEYIGIVTISALMVTLFFGGWQGPL-------LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLIN 312
Cdd:COG1005 238 AEYANMFLVSALATTLFLGGWLGPFpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVN 317
                       330
                ....*....|..
gi 15832420 313 LLVTAAVILWQA 324
Cdd:COG1005 318 LVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
17-317 7.99e-143

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 404.93  E-value: 7.99e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    17 KAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLL 96
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    97 AFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNM 176
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   177 TDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLF 256
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15832420   257 FGGWQGPL-LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTA 317
Cdd:pfam00146 241 LGGWLGPFpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
 
Name Accession Description Interval E-value
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-319 6.33e-167

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 466.98  E-value: 6.33e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    1 MSWISPELIeiLLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR 80
Cdd:PRK06076   1 MSLFGPDLL--LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADK 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   81 VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL 160
Cdd:PRK06076  79 VLFLLAPVIAFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  161 GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG 240
Cdd:PRK06076 159 GLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLG 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  241 EYIGIVTISALMVTLFFGGWQGPL-----LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:PRK06076 239 EYINMILVSALITTLFLGGWLPPFplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318

                 ....
gi 15832420  316 TAAV 319
Cdd:PRK06076 319 TAAV 322
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-324 3.14e-159

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 447.65  E-value: 3.14e-159
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   1 MSWIspeLIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR 80
Cdd:COG1005   1 MSLL---LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADK 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  81 VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL 160
Cdd:COG1005  78 FLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 161 GLSLMGVVAQAGSFNMTDIVNSQA-HVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFV 239
Cdd:COG1005 158 GLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFL 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 240 GEYIGIVTISALMVTLFFGGWQGPL-------LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLIN 312
Cdd:COG1005 238 AEYANMFLVSALATTLFLGGWLGPFpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVN 317
                       330
                ....*....|..
gi 15832420 313 LLVTAAVILWQA 324
Cdd:COG1005 318 LVLTAAVVLLFG 329
NADHdh pfam00146
NADH dehydrogenase;
17-317 7.99e-143

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 404.93  E-value: 7.99e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    17 KAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLL 96
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    97 AFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNM 176
Cdd:pfam00146  81 AFAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   177 TDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLF 256
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15832420   257 FGGWQGPL-LPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTA 317
Cdd:pfam00146 241 LGGWLGPFpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
15-310 4.82e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 259.27  E-value: 4.82e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   15 ILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSL 94
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   95 LLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSF 174
Cdd:MTH00054  85 FIAWGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  175 NMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVT 254
Cdd:MTH00054 165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15832420  255 LFFGGWQGPLLPP-----FIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTL 310
Cdd:MTH00054 245 LFLGGWLVISGPTsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
8-321 1.99e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 255.04  E-value: 1.99e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 MIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  168 VAQAGSFNMTDIVNSQAH-VWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIV 246
Cdd:MTH00216 162 LLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15832420  247 TISALMVTLFFGGWQGPLLPPFI---WFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVIL 321
Cdd:MTH00216 242 LMSCLTTILFLGGWLSPIKYFKGgagWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
8-321 8.06e-77

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 238.76  E-value: 8.06e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00029   3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 MIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:MTH00029  83 IISFTLAILAWAIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  168 VAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVT 247
Cdd:MTH00029 163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  248 ISALMVTLFFGGWQGPLLPPF------------------IWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLT 309
Cdd:MTH00029 243 MSCMMTIFFLGGWLSPLDGIPtppeafsifeqiasskssFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322
                        330
                 ....*....|..
gi 15832420  310 LINLLVTAAVIL 321
Cdd:MTH00029 323 LGLVILTAGILI 334
ndhA CHL00032
NADH dehydrogenase subunit 1
3-318 8.54e-76

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 236.77  E-value: 8.54e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    3 WIspeLIEILLTILKAVVILLVVVtcgafmsFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVI 82
Cdd:CHL00032  28 WI---LVPILTLVLGITIGVLVIV-------WLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   83 FTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGL 162
Cdd:CHL00032  98 FSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTL 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  163 SLMGVVAQAGSFNMTDIVNSQAHV----WNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFF 238
Cdd:CHL00032 178 CVLSISLLSNSLSTVDIVEAQSKYgfwgWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  239 VGEYIGIVtISALMVT-LFFGGWQGPLlpPFIWFA----------------------LKTAFFMMMFILIRASLPRPRYD 295
Cdd:CHL00032 258 VASYLNLL-VSSLFVTvLYLGGWNLSI--PYIFIPelfeinktggvfgttigifitlAKTYLFLFISITTRWTLPRLRMD 334
                        330       340
                 ....*....|....*....|...
gi 15832420  296 QVMSFGWKICLPLTLINLLVTAA 318
Cdd:CHL00032 335 QLLNLGWKFLLPISLGNLLLTTS 357
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
4-310 1.04e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 232.48  E-value: 1.04e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    4 ISPELIEILLTILKAVVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIF 83
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAV----AFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILF 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   84 TLAPMIAftsLLLAFAI-VPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGL 162
Cdd:MTH00111  77 TLTPILA---LLLALTIwTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGI 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  163 SLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEY 242
Cdd:MTH00111 154 ILLSLILLSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEY 233
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  243 IGIVTISALMVTLFFGGWQGPLLPPF--IWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTL 310
Cdd:MTH00111 234 ANILLMNTLTTILFLNPSTLNLPPELftINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
8-310 1.45e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 229.51  E-value: 1.45e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKavvILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00104   3 MINILLLIIP---ILLAV----AFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAP 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 MIAFTSLLLAFAIVPVSPGWVvaDLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:MTH00104  76 ILALTLALTMWIPLPMPYPLI--NMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSV 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  168 VAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVT 247
Cdd:MTH00104 154 LLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIM 233
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832420  248 ISALMVTLFFGGWQGPLLPPF--IWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTL 310
Cdd:MTH00104 234 MNALTTILFLGAFHNPYMPELytTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
19-323 6.86e-73

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 227.95  E-value: 6.86e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   19 VVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAF 98
Cdd:MTH00134  17 VPVLLAV----AFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLW 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   99 AIVPVSpgWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTD 178
Cdd:MTH00134  93 APMPMP--YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQT 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  179 IVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFG 258
Cdd:MTH00134 171 FNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLG 250
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15832420  259 GWQGPLLPPFIWFAL--KTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLinllvtaAVILWQ 323
Cdd:MTH00134 251 ASHIPTLPELTTINLmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL-------ALVIWH 310
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
8-310 5.87e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 225.66  E-value: 5.87e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKAVVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00071   5 ISLIINPLLYIIPVLLAV----AFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 MIAFTSLLLAFAIVPVSpgWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:MTH00071  81 TMALTLALIIWTPLPMP--NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  168 VAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVT 247
Cdd:MTH00071 159 ILLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILM 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832420  248 ISALMVTLFFGGWQGPLLPPF--IWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTL 310
Cdd:MTH00071 239 MNTLSTILFLGSTYNHLQPELstMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
10-321 1.46e-71

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 224.47  E-value: 1.46e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   10 EILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMI 89
Cdd:MTH00040   2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   90 AFTSLLLAFAIVPVSPGWVvaDLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVA 169
Cdd:MTH00040  82 FLFLALLLWSLIPVPTPTL--NVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  170 QAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTIS 249
Cdd:MTH00040 160 FSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMN 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15832420  250 ALMVTLFFGG-WQGPLLPPF--IWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVIL 321
Cdd:MTH00040 240 LLSVILFLGGgSPFNEIFPIniIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLS 314
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
8-315 7.06e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 222.44  E-value: 7.06e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKAVVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAV----AFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAP 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 miaFTSLLLAFAIVPVSPG-WVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMG 166
Cdd:MTH00143  77 ---CLSLILALLLWQLYPSyFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  167 VVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIV 246
Cdd:MTH00143 154 PLFLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANIL 233
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15832420  247 TISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:MTH00143 234 FMSLLTVVLFFGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVL 302
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
11-321 1.90e-70

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 221.15  E-value: 1.90e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   11 ILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIA 90
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   91 FTSLLLAFAIVPVSPGwvVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQ 170
Cdd:MTH00195  81 LALALILWVPIPSPFG--FSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  171 AGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISA 250
Cdd:MTH00195 159 AGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSV 238
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15832420  251 LMVTLFFGGWQGPLlppfiwFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVIL 321
Cdd:MTH00195 239 LTTILFLGGGGTII------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPF 303
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
8-324 1.27e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 216.70  E-value: 1.27e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    8 LIEILLTILKAVVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAP 87
Cdd:MTH00218   2 LLSLINLLLYILPVLLAV----AFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   88 MIAFTSLLLAFAIVPVsPGwVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:MTH00218  78 ILALTLALLLWMPLPL-PF-SLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  168 VAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVT 247
Cdd:MTH00218 156 IILTGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILF 235
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15832420  248 ISALMVTLFFGGWQgpllpPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQA 324
Cdd:MTH00218 236 MNTLSVILFLGTSL-----TTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFA 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
12-310 6.51e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 214.51  E-value: 6.51e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   12 LLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAF 91
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   92 TSLLLAFAIVPvsPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQA 171
Cdd:MTH00225  81 ILSLILWSLYP--SMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  172 GSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISAL 251
Cdd:MTH00225 159 LTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSML 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 15832420  252 MVTLFFGgwqGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTL 310
Cdd:MTH00225 239 TSILFFG---GFFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
11-314 1.21e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 208.85  E-value: 1.21e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   11 ILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIA 90
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   91 FTSLLLAFAIVPVSpgWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQ 170
Cdd:MTH00193  81 LFLSLLIWLIYPYL--FNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  171 AGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISA 250
Cdd:MTH00193 159 IGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSM 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15832420  251 LMVTLFFGGwqgplLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLL 314
Cdd:MTH00193 239 LFVLMFLGG-----DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLL 297
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
6-315 6.11e-56

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 183.83  E-value: 6.11e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420    6 PELIEILLTILKAVVILlvvvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTL 85
Cdd:MTH00010   4 SFFISILLSYVMALLAM-------AFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   86 APMIAFTSLLLAFAIVPVSPGWVVadLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLM 165
Cdd:MTH00010  77 APMMSLILALLLWSLYPHKHPSFF--LKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILL 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  166 GVVAQAGSFNMTDIVNSQaHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGI 245
Cdd:MTH00010 155 SALLILQTFSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANI 233
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  246 VTISaLMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:MTH00010 234 LIMS-LFTSVFFTSFIPSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMI 302
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
15-314 1.71e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 153.52  E-value: 1.71e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   15 ILKAVVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSL 94
Cdd:MTH00090   3 LLMMIFILQAI----AFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVM 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   95 LLAFAIVPVSPGWVvaDLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSF 174
Cdd:MTH00090  79 YLEWFVLPYFFDFL--SFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  175 NmtdIVNSqahvwNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVT 254
Cdd:MTH00090 157 S---FVSS-----FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSV 228
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  255 LFFGgwqgpllppFIWFALktAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLL 314
Cdd:MTH00090 229 LFFK---------FSFLML--FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
12-303 2.91e-34

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 127.22  E-value: 2.91e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  12 LLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPnrvgwgGSLQLVADMIKMFFKEDWIPKfSDRVIFTLAPMIAF 91
Cdd:COG0650   1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPE-TASWLFRAAPYVAL 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  92 TSLLLAFAIVPV----SPGWVVADLnIGILFFLMMAGLAVyavLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
Cdd:COG0650  74 AAMLLAALLVPVlttgPPLSFSGDL-IVLVYLLALARFFL---ALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 168 VAQAGSFNMTDIVNSQA--HVWNVIPQF-FGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIG 244
Cdd:COG0650 150 ALLAGSTSLSDIVAYQAahGPLLLSPSLlLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420 245 IVTISALMVTLFFG-GWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWK 303
Cdd:COG0650 230 LFVLLSLFVNLFLPwGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWT 289
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
19-315 4.09e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 126.58  E-value: 4.09e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   19 VVILLVVvtcgAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDwIPKFSDRVIFTLAPMIAFTSLLLAF 98
Cdd:MTH00058  12 LIILLLV----AFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFK-VYGFQSRSWFSLFGVFLLVLLVVFY 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420   99 AIVpVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYE-------VFLGLSLmgvvaqa 171
Cdd:MTH00058  87 CFI-YGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEacfmcivIFCGLCY------- 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15832420  172 GSFNMTDIVNSQAHVWNVIPqfFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISAL 251
Cdd:MTH00058 159 GSYSLVDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWL 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15832420  252 MVTLFFGGWqgpllppFIWFALktAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLV 315
Cdd:MTH00058 237 GSVLFFGGG-------FVSIML--LFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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