|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-747 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1505.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 1 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVP 80
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSGMSVYAQAAVEPKEETITVTAAPAPQESAWGPAATIAAKRSATGTKTDTPIEKTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE 160
Cdd:PRK10044 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQNNYLDGLKLQGNFYNDAVIDPYMLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 161 RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKG 240
Cdd:PRK10044 161 RAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 241 SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
Cdd:PRK10044 241 SEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 321 HEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKGHYLARKYVVDDEKLQNFSVDTQLQSKFAT 400
Cdd:PRK10044 321 HEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKGHYLNRGYVVDDEKLQNFSVDTQLQSKFAT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 401 GDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLV 480
Cdd:PRK10044 385 GDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGPVNTDFDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLV 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 481 TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKY 560
Cdd:PRK10044 461 TLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKY 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 561 VPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPA 640
Cdd:PRK10044 541 VPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPA 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 641 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE 720
Cdd:PRK10044 621 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDRE 700
|
730 740
....*....|....*....|....*..
gi 16128143 721 YVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:PRK10044 701 YVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
16-747 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 643.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 16 IAVVVATAVSGMSVYAQAAVEpKEDTITVTAAPAPQESawgpaatIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQ 95
Cdd:COG4773 10 LAAAAAGALAQAAAAAAAEAT-TLPEVTVTGTAEGTGG-------YTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 96 PKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNGLKLQGnfYNDAVIDPYMLERAEIMRGPVSVLYGK 175
Cdd:COG4773 82 ATTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDGLPLGG--FGGGQPDTANLERVEVLKGPAGLLYGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 176 SSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWR 255
Cdd:COG4773 155 GSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 256 PDDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRF 335
Cdd:COG4773 235 LTDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 336 AENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMR 415
Cdd:COG4773 309 SDSDRDGRSAYAYGAPDAATGTLT----------------RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSR 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 416 MRNDINAWfgyddSVPLLNLYNPVNTDFDfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESL 494
Cdd:COG4773 373 YDSDSDSA-----TAGTINIYNPVYGNLP-----EPDFDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDST 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 495 NRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVY 574
Cdd:COG4773 443 NRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVF 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 575 NLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKHMASLWADY 653
Cdd:COG4773 523 DITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTY 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 654 TFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASCFNTYGCFW 733
Cdd:COG4773 603 RFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYY 678
|
730
....*....|....
gi 16128143 734 GAERQVVATATFRF 747
Cdd:COG4773 679 GAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
78-747 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 586.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 78 KVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 157
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQ 237
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 238 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEKMV 315
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 316 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 395
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 396 SKFATGDIDHTLLTGV-DFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNkqkqtGVYVQDQAQ 474
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALN-----GVALQRILL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 475 WDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGKDGNIFAPSK 550
Cdd:TIGR01783 374 ADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGNSGDILEPEK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 551 GKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:TIGR01783 454 GKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 631 DT--TYKGNTPAQVPKHMASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgMAGSN 708
Cdd:TIGR01783 533 DTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTK--KKNLT 609
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 16128143 709 VALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 747
Cdd:TIGR01783 610 LALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
82-747 |
1.92e-125 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 388.35 E-value: 1.92e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 82 SISVVTAEEMALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 157
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDSLDDDGVYSYRLTGLARSA 234
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 235 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 308
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 309 SRNEKMVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 388
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 389 SVDTQLQSKFATGDIDHTLLTGVDFMRMRNDinawfgyddsvpllnlynpvntdfdfnakdpansgpyrilnkQKQTGVY 468
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------EKQTALY 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 469 VQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNI- 545
Cdd:cd01347 339 AQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGs 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 546 -----------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEG-----SFFSVEGGEIRARGVEIEAKA 609
Cdd:cd01347 419 hggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNtglglVTVYVNGGKARIRGVELEASY 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 610 ALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPA---NSFKV 685
Cdd:cd01347 498 DLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTAngnNTVKV 574
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16128143 686 GSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 747
Cdd:cd01347 575 PGYTLVDLSASYQFTK----NLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
255-746 |
7.56e-52 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 187.67 E-value: 7.56e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 255 RPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRlptDFNEGAKNNTYSRNEKMVGYSFDHEFNDTF--TVRQN 332
Cdd:pfam00593 8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR---PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 333 LRFAENKTSQNSVYGYGvcsdpanayskqcaalapadkghYLARKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 412
Cdd:pfam00593 85 LRYSSLDGDYTSNSSGL-----------------------SGAGDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 413 FMRMRNDinaWFGYDDsvPLLNLYNPVNTDFDFNAKdpansgpyrilNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQ 491
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDPANPSSSSYSD-----------TTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYST 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 492 ESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGNI-FAPSKGKQYEV 556
Cdd:pfam00593 203 DGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNPdLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 557 GVKYvpEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:pfam00593 283 GLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDA 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 631 DTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYDLARvgmaGS 707
Cdd:pfam00593 361 DADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNK----NL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 16128143 708 NVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 746
Cdd:pfam00593 434 TLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-747 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1505.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 1 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVP 80
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSGMSVYAQAAVEPKEETITVTAAPAPQESAWGPAATIAAKRSATGTKTDTPIEKTP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLE 160
Cdd:PRK10044 81 QSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSQNNYLDGLKLQGNFYNDAVIDPYMLE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 161 RAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKG 240
Cdd:PRK10044 161 RAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 241 SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
Cdd:PRK10044 241 SEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 321 HEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKGHYLARKYVVDDEKLQNFSVDTQLQSKFAT 400
Cdd:PRK10044 321 HEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKGHYLNRGYVVDDEKLQNFSVDTQLQSKFAT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 401 GDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLV 480
Cdd:PRK10044 385 GDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGPVNTDFDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLV 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 481 TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKY 560
Cdd:PRK10044 461 TLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKY 540
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 561 VPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPA 640
Cdd:PRK10044 541 VPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPA 620
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 641 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE 720
Cdd:PRK10044 621 QVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDRE 700
|
730 740
....*....|....*....|....*..
gi 16128143 721 YVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:PRK10044 701 YVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
16-747 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 643.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 16 IAVVVATAVSGMSVYAQAAVEpKEDTITVTAAPAPQESawgpaatIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQ 95
Cdd:COG4773 10 LAAAAAGALAQAAAAAAAEAT-TLPEVTVTGTAEGTGG-------YTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 96 PKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNGLKLQGnfYNDAVIDPYMLERAEIMRGPVSVLYGK 175
Cdd:COG4773 82 ATTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDGLPLGG--FGGGQPDTANLERVEVLKGPAGLLYGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 176 SSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWR 255
Cdd:COG4773 155 GSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 256 PDDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRF 335
Cdd:COG4773 235 LTDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 336 AENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMR 415
Cdd:COG4773 309 SDSDRDGRSAYAYGAPDAATGTLT----------------RYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSR 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 416 MRNDINAWfgyddSVPLLNLYNPVNTDFDfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESL 494
Cdd:COG4773 373 YDSDSDSA-----TAGTINIYNPVYGNLP-----EPDFDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDST 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 495 NRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVY 574
Cdd:COG4773 443 NRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVF 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 575 NLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKHMASLWADY 653
Cdd:COG4773 523 DITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTY 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 654 TFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASCFNTYGCFW 733
Cdd:COG4773 603 RFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYY 678
|
730
....*....|....
gi 16128143 734 GAERQVVATATFRF 747
Cdd:COG4773 679 GAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
78-747 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 586.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 78 KVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 157
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQ 237
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 238 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEKMV 315
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 316 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 395
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 396 SKFATGDIDHTLLTGV-DFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNkqkqtGVYVQDQAQ 474
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALN-----GVALQRILL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 475 WDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGKDGNIFAPSK 550
Cdd:TIGR01783 374 ADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGNSGDILEPEK 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 551 GKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:TIGR01783 454 GKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 631 DT--TYKGNTPAQVPKHMASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvgMAGSN 708
Cdd:TIGR01783 533 DTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTK--KKNLT 609
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 16128143 709 VALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 747
Cdd:TIGR01783 610 LALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
71-747 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 577.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 71 KTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTrGASNTYDHLIIRGFAAegqSQNNYLNGLKLQGNFYn 150
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGA-GEGGNGDSFSIRGFSA---SGDIYVDGLRDPGQYR- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 151 davIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSdsldddGVYS----YR 226
Cdd:COG4774 76 ---RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVN------GPLGddlaYR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 227 LTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwLPKEGTVEPLPngkrLPTDFNEGAKNN 306
Cdd:COG4774 147 LNGMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYG-VPAVANGRPVD----VDRSTFYGQPDD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 307 TYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcsdpanayskqcaalapADKGHYLARKYVVDDEKLQ 386
Cdd:COG4774 222 YSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTG------------------GNATGTVTRSAYRRDQDND 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 387 NFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDiNAWFGYDDSVPLLNLYNPVNTDFDFNAkdpaNSGPYRILNKQKQTG 466
Cdd:COG4774 284 TLSNQTDLTGKFDTGGVKHTLLAGVEYSREDSD-NARYSGGGTAPTVNLYNPVYGAPVTGP----TLGGADNDSRTDTTG 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 467 VYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGK--- 541
Cdd:COG4774 359 LYLQDTISLtDRWSLLAGLRYDRFDTDYTDRTTGaTTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSlsn 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 542 DGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSY 621
Cdd:COG4774 439 AGQALDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGY 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 622 TYTDAEYT--TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDL 699
Cdd:COG4774 519 TYLDAEITksANAANVGNRLPNVPRHSASLWTTYDL---PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRL 595
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 16128143 700 ARvgmaGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 747
Cdd:COG4774 596 NK----NLTLRLNVNNLTDKRYYASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
17-746 |
1.07e-160 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 482.38 E-value: 1.07e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 17 AVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEM-ALHQ 95
Cdd:PRK14050 17 GVALAALVLSGLVAAQEGNTTQLETIVVEGGNAASATATGPVDGYVAKATATGSKTDTPITEIPQSVSVVGRQEMdDRGV 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 96 PKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGK 175
Cdd:PRK14050 97 TNKVDEALRYTPGVLSQPFGTDGDTDWFYIRGFDA--TQTGVFLDGLNLFSYGFGGFQIDPFMLERVEVLKGPASVLYGG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 176 SSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWR 255
Cdd:PRK14050 175 SNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 256 PDDKTNFTFLSYFQNEPET-GYYGWLPKEGTVEPLPNGKrLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQNL 333
Cdd:PRK14050 255 PDDATSLTVYGYLSGLDQVhVGNGFLPYVGTVVDAPFGK-IDRDAFYGEPDiDNGSYAQQMLGYEFSHEFDNGWTFSQNA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 334 RFAENKTSQNSVYGYGVcSDPANAYSKqcaalaPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF 413
Cdd:PRK14050 334 RYGHLHKHEKGPYTYGY-VGGATGLPD------PTGPDYMLNRIGFEHRSKVDSFSIDNRLEGEFDTGALTHNLLFGLDY 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 414 MRMRND-INAWFGyddSVPLlNLYNPVntdfdFNAKDPANSgPY--RILNKQkQTGVYVQDQAQW-DKVLVTLGGRYDWA 489
Cdd:PRK14050 407 KYYRLDqVQACCG---ATPI-SATNPV-----YGTTQGANF-VYldQILTQQ-QIGIYAQDQIRFgDGWLVTLNGRYDYV 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 490 DQESLNRVaGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVV 569
Cdd:PRK14050 476 DTDSDARI-GTSYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEPSFIDGLI 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 570 TGAVYNLTKTNNLMADPeGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDT--TYKGNTPAQVPKHMA 647
Cdd:PRK14050 555 TASVFQITKKNVTVTDP-LTFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDAnpSLIGNSPYLVPETQA 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 648 SLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGmagsnVALHVNNLFDREYVASCFN 727
Cdd:PRK14050 634 SLWLDYAVTDGAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEKNDWG-----ASLNVANLFDKEYVAGCQG 708
|
730
....*....|....*....
gi 16128143 728 TYGCFWGAERqvvaTATFR 746
Cdd:PRK14050 709 LLVCGYGESR----TITLK 723
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
63-747 |
1.95e-144 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 440.49 E-value: 1.95e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 63 ARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqsqnnYLNGL 142
Cdd:PRK14049 63 ATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAFFVRGFDV-------TYTGV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 143 kLQGNFYNDAVID------PYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDS 216
Cdd:PRK14049 136 -FRDNLRQPGASSsifktePYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 217 LDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQ--NEPETGYYGWLPKEGTVEPLPNGKr 294
Cdd:PRK14049 215 VNETDPVYYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVLGEYSrtKTGGTAAYYNDPLTGEVTDIFAGN- 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 295 lpTDFNEgaknntYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcSDPANayskqcAALAPADKGHYl 374
Cdd:PRK14049 294 --PAFND------SVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYA--PNAAD------PTLLDSSAGTY- 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 375 arkyvvdDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDdsvPLLNLYNPVN------TDFDFnak 448
Cdd:PRK14049 357 -------DERLTAFVIDNQLEAKFDTGAFEHTLLAGVDYTKLRFRALNGRGVS---PPLDTKNPTQgrpvaaIDFST--- 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 449 dpansgpyRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQES----LNRVAGTTDKRDDKQFTWRGGVNYLFDNGVT 524
Cdd:PRK14049 424 --------RTVQDQWQLGTYLQDQIRYDAWTLTAGGRYDWVSTDTdttdLATDSLTTVSQKDKEFSGRIGLTYETDFGLA 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 525 PYFSYSESFEPSSQVGKD-GNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL----MADPEG-SFFSVEGGEI 598
Cdd:PRK14049 496 PYISYSTAFSPNAGFNRAtNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLyyevVFLAAGpTNIQVQRGKL 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 599 RARGVEIEAKAALSASVNVVGSYTYTDA---EYTTDTTykGNTPAQVPKHMASLWADYTFF-DGPLSGLTLGTGGRYTGS 674
Cdd:PRK14049 576 RSRGFELEANTSLDNGLSLIASYTYTDVkiiQGPEGTI--GNEVSSVPNHMASAWAHYTLPeGGPLYGLGLGAGARFVGS 653
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16128143 675 SYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVN--NLFD-REYVASCFNtygCFWGAERQVVATATFRF 747
Cdd:PRK14049 654 SYGNDQNTFKNSSRVLFDASVGYDFAAIDKKYEGLMLQVNatNLFDrRKAVCTAGF---CYRDQGRTVIGSLRYNW 726
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
82-747 |
1.92e-125 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 388.35 E-value: 1.92e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 82 SISVVTAEEMALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 157
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 158 MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDSLDDDGVYSYRLTGLARSA 234
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 235 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 308
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 309 SRNEKMVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 388
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 389 SVDTQLQSKFATGDIDHTLLTGVDFMRMRNDinawfgyddsvpllnlynpvntdfdfnakdpansgpyrilnkQKQTGVY 468
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------EKQTALY 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 469 VQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNI- 545
Cdd:cd01347 339 AQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGs 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 546 -----------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNLMADPEG-----SFFSVEGGEIRARGVEIEAKA 609
Cdd:cd01347 419 hggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNtglglVTVYVNGGKARIRGVELEASY 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 610 ALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPA---NSFKV 685
Cdd:cd01347 498 DLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADTAngnNTVKV 574
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16128143 686 GSYTVVDALVRYDLARvgmaGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 747
Cdd:cd01347 575 PGYTLVDLSASYQFTK----NLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
68-730 |
5.21e-98 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 316.77 E-value: 5.21e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQGN 147
Cdd:COG1629 7 TATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGGGGNRVLVLVDGVPLNDP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 148 FYND---AVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGfdfSDSLDDDGVYS 224
Cdd:COG1629 85 SGGDgglSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRAS---LSLSGGNGKLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 225 YRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTF-LSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGA 303
Cdd:COG1629 162 YRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLsASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDN 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 304 KNNTYSrnekmVGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkghylarKYVVDDE 383
Cdd:COG1629 242 TRDRYS-----LSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGG----------------------TLEQTDF 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 384 KLQNFSVDTQLQSKFATGDiDHTLLTGVDFMRMRNDiNAWFGYDDSVPLLNLYNPVntdfdfnakdpansgpYRILNKQK 463
Cdd:COG1629 294 DNRTYGLELRLTYDLGFGG-KHTLLVGLDYQRQDLD-GSGYPLDLGSGSLPTLTSG----------------ADDDGTTT 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 464 QTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAGTTD---KRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS-- 537
Cdd:COG1629 356 SLALYAQDTYKLtDKLTLTAGLRYDYVSYDVDDTVTGTDSasgSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTfg 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 538 ---QVGKDGNIFA-----PSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGS-----FFSVEGGEIRARGVE 604
Cdd:COG1629 436 elyANGTDPYSVGnpdlkPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNdsgfsTYYTNAGKARSYGVE 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 605 IEAKAALSASVNVVGSYTYTDAEYTTDTT----YKGNTPAQVPKHMASLWADYTFFDgplsGLTLGTGGRYTGSSYGDPA 680
Cdd:COG1629 516 LELSYQLTPGLSLNASYSYTDAKFDDDTDgsadLDGNRLPGVPPLTANLGLTYEFPG----GWSLGLGVRYVGDRYLDDA 591
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 16128143 681 NSFKV-GSYTVVDALVRYDLARVGmagsNVALHVNNLFDREYVASCFNTYG 730
Cdd:COG1629 592 NTQGApGGYTLVDLGAGYRFGDNL----TLSLGVDNLFDKKYATSLSVRAS 638
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
19-747 |
5.66e-69 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 239.83 E-value: 5.66e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 19 VVATAVSGMSVYAQAAvEPKEDTITVTAAPAPQESAwgpaatiaarqsatgtktdtpiQKVPQSISVVTAEEMALHQPKS 98
Cdd:COG4772 4 ALAAALLLAAAAAAEA-ATTLETVVVTGSRAAEARL----------------------KDVPGSVSVVDREELENQAATS 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 99 VKEALSYTPGVSVgtRGASNTYDHL-I-IRGFAAEGQSQNN-YLNGLKLQGNFYND--AVIDPYM--LERAEIMRGPVSV 171
Cdd:COG4772 61 LREVLRRVPGVNV--QEEDGFGLRPnIgIRGLGPRRSRGITlLEDGIPIAPAPYGDpaAYYFPDLerMERIEVLRGAAAL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 172 LYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYsyrLTGLARSANAQQKGSEEQRYAIAPA 251
Cdd:COG4772 139 RYGPQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGTVGNFGYL---VEYSRKRGDGFRDNSGFDINDFNAK 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 252 FTWRPDDKTNFTF-LSYFQNEPETgyYGWLPkegtveplpngkrlPTDFNEG-----AKNNTYSRNEKMVGYSFDHEFND 325
Cdd:COG4772 216 LGYRLSDRQELTLkFQYYDEDANT--PGGLT--------------DAQFDADprqsyRPADQFDTRRTQLSLRYEHQLSD 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 326 TFTVrqNLRFAENKTSQNSVYGYGVcSDPANayskqcaalaPADKGHYLARKYvvddeklQNFSVDTQLQSKFATGDIDH 405
Cdd:COG4772 280 NTTL--TTTAYYNDFSRNWYIRQNT-ADPNT----------PGLGLRGNPRGY-------RSYGIEPRLTHRFELGGVPH 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 406 TLLTGVDFMRMRNDinaWFGYDDSVPLLNLYNPVNTDFDFNAKDpansgpyrilnkqkqTGVYVQDQAQW-DKVLVTLGG 484
Cdd:COG4772 340 TLEVGLRYHREEED---RKQYVNTYGQGRSGAGLRRDRRFSADA---------------LAAYAQNRFELtGRLTLTPGL 401
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 485 RYDWADQESLNRV-----AGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEP------SSQVGKDGNIfAPSKGKQ 553
Cdd:COG4772 402 RYEHIRRDRTDRYstrtgGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPptfgdlAYGNGGNPDL-KPEKSWN 480
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 554 YEVGVKYVPEDRpivVTG-AVYNLTKTNNLM-----ADPEGSFFsVEGGEIRARGVEIEAKAALSA----SVNVVGSYTY 623
Cdd:COG4772 481 YELGTRGRIGNG---LSAeVALFYIDYDNELgscsaAGGDRSTF-TNAGETRHQGLELALDYDLLKggglGLPLFAAYTY 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 624 TDAEYTT--DTTYKGNTPAQVPKHMASLWADYTFfdgplSGLTLGTGGRYTGSSYGDPANSFKVG------SYTVVDALV 695
Cdd:COG4772 557 TDAEFTSdfGPVFAGNRLPYVPRHQLTAGLGYEH-----GGWTANLNGRYVSEQFTDAANTVADGsfgkipSYTVLDLSA 631
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 16128143 696 RYDLARvgmaGSNVALHVNNLFDREYVAS--CFNTYGCFWGAERQVVATATFRF 747
Cdd:COG4772 632 SYDFGK----NLSLFAGVNNLFDKRYIASraPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
68-699 |
5.43e-58 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 207.79 E-value: 5.43e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE-------GQSQNNYln 140
Cdd:COG4771 33 TATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDrvlvlidGVPVNNP-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 141 glkLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGT--DSLFQTGFDFSDSLD 218
Cdd:COG4771 111 ---ALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSngNGTYSGSLSLGGPGD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 219 DDGV---YSYRLTGLARSANAQQK--GSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEpetgyygwlpkEGTVEPLPNGK 293
Cdd:COG4771 188 KLSFllsGSYRDRDGYLDYRNGGFvgNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQ-----------DRDGGPPTLGD 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 294 RLPTDFNEGAKNNTYSRNEKMVGYsfDHEFNDTFtvrqNLRFAENKTSQNSVYGYGVCSDPANayskqcaalapadkghy 373
Cdd:COG4771 257 TEISSDNAGDRDTTTDRGNYSLRY--NGDLGDNL----DLSLYYSRTDRDSTNGSLGGSTGSF----------------- 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 374 larkyvvDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVDFMRMRNDINAWFGYDDSvpllnlynpvntdfdfnakdpans 453
Cdd:COG4771 314 -------SDSDDTTYGLELDLTYPL---GGNHTLTLGAEYRYDDLDSSSFLGGADA------------------------ 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 454 gpyrilnKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADqeslnrvagTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSES 532
Cdd:COG4771 360 -------SRDTYGLFAQDEWKLtDKLTLTAGLRYDYYS---------TFGASNYTAFSPRLGLRYDLSDNLTLRASYGRG 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 533 F--------EPSSQVGKDGNIFA-----PSKGKQYEVGVKYVPEDRPIVVTGAVYNlTKTNNL-----MADPEGSFFSVE 594
Cdd:COG4771 424 FrapslaelYGSGTGTPGRYVLGnpdlkPETSDNYELGLEYRLGNGGLSLSLTGFY-TDIKDLivlvpVGPGPGDVLQYE 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 595 -GGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTykGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTg 673
Cdd:COG4771 503 nVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDT--GEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRY- 579
|
650 660
....*....|....*....|....*.
gi 16128143 674 SSYGDPANSFKVGSYTVVDALVRYDL 699
Cdd:COG4771 580 VTPPSGRLEGYTPGYTLLDLRASYKL 605
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
10-747 |
5.52e-52 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 193.48 E-value: 5.52e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 10 KHSLRKI--AVVVATAVSGMSVYAQAAVEPkedtiTVTAAPAPQESAWGPAATIAARQSATGtKTDTPIQKVPQSISVVT 87
Cdd:PRK09840 6 NFPARQFhsLAFFAGLCIGITPVAQALAAE-----GQTNADDTLVVEASTPSLYAPDQSADP-KFSQPLADTTQTITVIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 88 AEEMALHQPKSVKEALSYTPGVS---VGTRGASNTYDHLIIRGFAAegqSQNNYLNGLKLQGNFYNDAvidpYMLERAEI 164
Cdd:PRK09840 80 EQVIKDQGATNLTEALRNVPGVGtffAGENGNTTTGDAIYMRGFDT---SNSIYVDGIRDIGSISRDT----FNTEQVEV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 165 MRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSlFQTGFDFSDSLDDDGVySYRLTGLARSAN-AQQKGSEE 243
Cdd:PRK09840 153 IKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAW-FRRGTLDVNQVIGDTT-AVRLNVMGEKTHdAGRDKVKN 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 244 QRYAIAPAFTWRPDDKTNfTFLSYF---QNE------PETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKM 314
Cdd:PRK09840 231 ERYGVAPSVAFGLGTANR-LYLNYLhvtQNNtpdggiPTIGLPGYSAPSAGRAALNHAGKVDTHNFYGTDSDYDDSTTDT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 315 VGYSFDHEFNDTFTVRQNLRFAenKTSQNsvygYGVCSDPANAYSKQcaALAPADKGHY-LARKYVVDDEKLQNFSVDTQ 393
Cdd:PRK09840 310 ATMRFEHDINDNTTLRNTTRWS--RVKQD----YLLTAIMGGASNIT--TPTPSDVNTWtWSRTANTKDVSNKILTNQTN 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 394 LQSKFATGDIDHTLLTGVDFMR--MRNdinawFGYDDS-VPLLNLYNPvntdfdfnakDPANSGPYRILN------KQKQ 464
Cdd:PRK09840 382 LTSTFYTGSIGHDVSTGVEFTRetQTN-----YGVNPVtLPAVNLYHP----------DSSIHPGGLTRNganangQTDT 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 465 TGVYVQDQAQW-DKVLVTLGGRYDWADQE-----------------SLNRVAGTTDKRDDKQ-----FTWRGGVNYLFDN 521
Cdd:PRK09840 447 FAIYAFDTLQLtRDWELNGGIRLDNYHTEydsatacggsgrgaitcPAGVAKGSPVTTVDTAksgnlVNWKAGALYKLTE 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 522 GVTPYFSYSESFEP---------SSQVGKDGN--IFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSF 590
Cdd:PRK09840 527 NGNVYINYAVSQQPpggsnfalaQSGSGNSANrtDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTY 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 591 FsvEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT--DTTYKG-NTPAQVPKHMASLWADYTFfdgpLSGLTLGT 667
Cdd:PRK09840 607 S--QYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNgkDVAQDGsSSLPYTPEHAFTLWSQYQA----TDDLSVGG 680
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 668 GGRYTGS-------SYGDPANsfkVGSYTVVDALVRYDLARvgmagsNVALHVN--NLFDREYVASCFNT-YGCFWGAER 737
Cdd:PRK09840 681 GARYIGSmhrgsdgAVGTPAF---TEGYWVADAKLGYRVNR------NLDLQLNvyNLFDTDYVASINKSgYRYHPGEPR 751
|
810
....*....|
gi 16128143 738 QVVATATFRF 747
Cdd:PRK09840 752 TFLLTANMHF 761
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
255-746 |
7.56e-52 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 187.67 E-value: 7.56e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 255 RPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRlptDFNEGAKNNTYSRNEKMVGYSFDHEFNDTF--TVRQN 332
Cdd:pfam00593 8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDR---PLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 333 LRFAENKTSQNSVYGYGvcsdpanayskqcaalapadkghYLARKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 412
Cdd:pfam00593 85 LRYSSLDGDYTSNSSGL-----------------------SGAGDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 413 FMRMRNDinaWFGYDDsvPLLNLYNPVNTDFDFNAKdpansgpyrilNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQ 491
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDPANPSSSSYSD-----------TTTDSYGLYLQDNIKLtDRLTLTLGLRYDHYST 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 492 ESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGNI-FAPSKGKQYEV 556
Cdd:pfam00593 203 DGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNPdLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 557 GVKYvpEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTT 630
Cdd:pfam00593 283 GLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDA 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 631 DTTYKGNTPAQVPKHMASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYDLARvgmaGS 707
Cdd:pfam00593 361 DADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNK----NL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 16128143 708 NVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 746
Cdd:pfam00593 434 TLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
68-747 |
2.12e-30 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 127.51 E-value: 2.12e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDhLIIRGFA-------AEGQSQNnYLN 140
Cdd:TIGR01785 7 TATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQS-INIRGLQdnrvlvvVDGARQN-YQR 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 141 GLKLQGNFYndavIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPtTEPLKE-------VQFKAGTDSLFQTGFDF 213
Cdd:TIGR01785 85 GGAHNGSLF----VDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDA-ADLLRPgqlfgglAKLSYGSNNNSFGGSVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 214 SDSLDDDGV-----YSYRLTGLARSANAQQKGSEE-QRYAIAPAFTWRPDDKTNFTFlSYFQNEpetgyyGWLpkegtve 287
Cdd:TIGR01785 160 VAGRLDDNLdalvaATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEF-SYFTTE------GSL------- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 288 PLPNGKRLPTDFNEGAKNNTYSRNEKmvgysfdhefNDTFTVRQNLRFAENK--TSQNSVYGYGVCSDPANayskqcaal 365
Cdd:TIGR01785 226 DEAQNSGPGTEYVLGSSSTLLASSTR----------DRSATLTYNWTPEDNPwlDATASLYYNRTENDNDR--------- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 366 apadKGHYLARKYVVDDEklqNFSVDTQLQSKFAtGDIDHTLLTGVDFMRMRNDinawfgyddsvpllnlynpvNTDFDF 445
Cdd:TIGR01785 287 ----SARGVGREEGYQYT---TYGATLQNTSRFD-VASWSTLTYGVDWMKDKRR--------------------TESFDP 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 446 NAKDPANSGPYRIlnKQKQTGVYVQDQAQW--DKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGV 523
Cdd:TIGR01785 339 NSVTTIVPNPPSA--KEYFFGLFLQDNIPLldDRLTLSAGLRYDHYKLSPKTTADTEAVDRSYSRWSPSLGLSYKPVDWL 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 524 TPYFSYSESFEPSS----------QVGKDGNIFAPS------KGKQYEVGVKYVPED----------------------- 564
Cdd:TIGR01785 417 TLYASYSQGFRAPSidelygtgdhPGTPGGYTFAPNpnlkpeTSKTWELGANLSFDNllldndqlqfkvayfyndvkdfi 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 565 -----RPIVVTGAVYNLTKTNNLmadpegsffsvegGEIRARGVEIEAKAALsASVNVVGSYTYTDAEYTTDTTYKGNtp 639
Cdd:TIGR01785 497 dltigVTDNVTAGMNNITQYVNI-------------DGARIRGIEASASYDA-GLWATGLSYGYTIGKDQNTNQWLSN-- 560
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 640 aqVPKHMASLWADYTFFDgplSGLTLGTGGRYTGSSY-------GDPANSFKVGSYTVVDALVRYDLARVgmAGSNVALH 712
Cdd:TIGR01785 561 --IPPLKLVVTVGYRFPD---RRLDLGAKAAYYERQSespttedVAANGLLTTPGYTVVDLYATYQPNAV--KGLTVRFG 633
|
730 740 750
....*....|....*....|....*....|....*
gi 16128143 713 VNNLFDREYVAScFNTYGCfwGAERQVVATATFRF 747
Cdd:TIGR01785 634 VNNLTDRKYTPA-QSVPGA--GPGRNFKGSVKYQF 665
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
3-747 |
6.29e-23 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 104.18 E-value: 6.29e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 3 RSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEpkeDTITVTA---APAPQESAwgpaaTIAARQSATGTKTDTPIQKV 79
Cdd:PRK10003 7 RDNQYQAIAKPSLLAGCIALALLPSAAFAAPATE---DTVIVEGsatAPVDDGEQ-----DYSVKTTSAGTKMQMTQRDI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 80 PQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQGNFyNDAVIDPYML 159
Cdd:PRK10003 79 PQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRA--LYYSRGFQIDNYMVDGIPTYFESRWNL-GDALSDTALF 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 160 ERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLK-EVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTglarsANAQQ 238
Cdd:PRK10003 156 ERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKgDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIV-----AGYQN 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 239 KGSEEQRYAIAPAFTWR--PDDKTNFTFLS----YFQNEPETGYYGWLPKEGTveplpNGKRlpTDFNEG---AKNNTYS 309
Cdd:PRK10003 231 NDSWLDRYNSEKTFFSGivDADLGDLTTLSagyeYQRIDVNSPTWGGLPRWNT-----DGSS--NSYDRArstAPDWAYN 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 310 RNE-KMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYgygvcsdpANAY-SKQCAALAPADKGHYLARKYV----VDDE 383
Cdd:PRK10003 304 DKEiNKVFMTLKQRFADTWQATLNATHSEVEFDSKMMY--------VDAYvDKATGMLVGPYSNYGPGFDYVggtgWNSG 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 384 KLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRND-INAWfgyDDSVPllnlyNPVNTDFDFNAKDPANS-GPYRIL-- 459
Cdd:PRK10003 376 KRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRyFSSW---ANIFP-----DEIGSFYNFNGNFPQTDwSPQSLAqd 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 460 NKQKQTGVYVQDQAQW-DKVLVTLGGRY-DWadqeslnRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS 537
Cdd:PRK10003 448 DTTHMKSLYAATRVSLaDPLHLILGARYtNW-------RVDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQN 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 538 QVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNnlMADPEGSFFSVEGGE--------IRARGVEIEAKA 609
Cdd:PRK10003 521 DRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDN--VAQSTGTPIPGSNGEtaykavdgTVSKGVEFELNG 598
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 610 ALSASVNVvgsyTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPlsGLTLGTGGRYTGSSYGD---PANSFKV- 685
Cdd:PRK10003 599 AITDNWQL----TFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLPVMP--ELTVGGGVNWQNRVYTDtvtPYGTFRAe 672
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16128143 686 -GSYTVVDALVRYDLARvgmagsNVAL--HVNNLFDREYvASCFNTYGCFwGAERQVVATATFRF 747
Cdd:PRK10003 673 qGSYALVDLFTRYQVTK------NFSVqgNVNNLFDKTY-DTNVEGSIVY-GAPRNFSITATYQF 729
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
75-180 |
2.28e-22 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 92.33 E-value: 2.28e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 75 PIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFAaeGQSQNNYLNGLKLQGNFYND--- 151
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGG-GGGGSSISIRGFG--SNRVLVLVDGVPLNSGGGGSvdl 77
|
90 100
....*....|....*....|....*....
gi 16128143 152 AVIDPYMLERAEIMRGPVSVLYGKSSPGG 180
Cdd:pfam07715 78 NSIDPEDIERVEVLKGPASALYGSGAIGG 106
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
17-720 |
7.85e-22 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 100.62 E-value: 7.85e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 17 AVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQEsawgpaatiaarqsatgtktdtpIQKVPQSISVVTAEEMALHQP 96
Cdd:PRK13483 11 ALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQ-----------------------IRDAPASISVITREDLENRFY 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 97 KSVKEALSYTPGVSVgtRGASNTYDhLIIRGFAA-------EGQSQNNYLNGLKLQGNFYNDAVIDPY-MLERAEIMRGP 168
Cdd:PRK13483 68 RDLTDALLDVPGVVV--TGGGDRTD-ISLRGMGSqytlilvDGKRQSSRETRPNSDGPGVEQAWTPPLaAIERIEVIRGP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 169 VSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRY-- 246
Cdd:PRK13483 145 MSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDLLGLQLYGQYTQREEDDIEGgy 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 247 ------AIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwlpkeGTVEPLPNGKRLPTDFNEGAKNNTYSRNEkmvgYSFD 320
Cdd:PRK13483 225 rdkdarSLTAKLALTPNEDHDIMLEVGTSNQERDSTVG-----KTVAPLAPGESCGRRGCPESSTTEYERST----VSLS 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 321 HefndtftvrqnlrfaenktsqNSVYGYGVcsdpANAYSKQcaalapaDKGHYLARKYVVDdeklqnfsvDTQLQSKFAT 400
Cdd:PRK13483 296 H---------------------TGRWDFGT----SDTYIQH-------EEFDNKSREMKIK---------NTDFQSSLVA 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 401 G-DIDHTLLTGVDFMRMRndinawfgyddsvpllnlynpvNTDFDFNAKdpanSGPYRILNkqKQTGVYVQDqaQW---D 476
Cdd:PRK13483 335 PlGQEHTLTFGAAYNHQD----------------------LTDETSNQI----SDLTDISR--TQWAVFSED--EWriaD 384
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 477 KVLVTLGGRYDwaDQESLN-----RVAGTTDKRDdkQFTWRGGVNYLFDngvTPyfSYSESFEPSSQVGKDGNIF----- 546
Cdd:PRK13483 385 DFALTGGLRLD--HDENFGghvspRVYGVWNLAP--SWTVKGGVSTGFR---AP--SLRQTTPDWGQVSRGGNIYgnpdl 455
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 547 APSKGKQYEVGVKYVPEDRPIVVTGAVYN-----LTKT-----------NNLMADPEgsfFSVEGGEIRARGVEIEAKAA 610
Cdd:PRK13483 456 KPETSLNKELGLYYDLGSGLTASLTVFYNefkdkITRVacpatqctdgpNQFGADPT---TYVNIDEAVTQGVEASLSYP 532
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 611 LSASVNVVGSYTYTDAEYTTDtTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTV 690
Cdd:PRK13483 533 ITSTLSLSGNYTYTDSEQKSG-AYKGSPLNQLPKHLFQASLNWEPTDRLNSWARVNYRGEESQPTTGPSSSSFIAPSYTF 611
|
730 740 750
....*....|....*....|....*....|..
gi 16128143 691 VDALVRYDLARvgmagsNVALH--VNNLFDRE 720
Cdd:PRK13483 612 LDLGANYQLTD------NLKLSagIYNLFDKE 637
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
68-331 |
1.55e-21 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 95.32 E-value: 1.55e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFaaeGQSQNNYL-NGLKL-- 144
Cdd:COG4206 4 TATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGL---GSNQTLVLiDGVPLnd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 145 -QGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTdslFQTGFDFSDSLDDDGVY 223
Cdd:COG4206 81 pSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGS---FGTRRLSASLSGGAGKF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 224 SYRLTGLARSAN-------AQQKGSEEQRYAIAPAFTWRPDDKTNFTFlSYFQNEPETGYYGWLPKEGTVEPLPNGKRLP 296
Cdd:COG4206 158 SYSLSASYRRSDgyryndpDLRNNDGYENTSLNARLGYKLGDNGSLSL-SGGYSDSERGYPGAVGSDRNLRLSLSLEYKL 236
|
250 260 270
....*....|....*....|....*....|....*
gi 16128143 297 TDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQ 331
Cdd:COG4206 237 SDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
58-721 |
2.21e-18 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 89.54 E-value: 2.21e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 58 AATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGfaAEGQSQNN 137
Cdd:TIGR01779 24 EAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSLFLRG--TESDHVLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 138 YLNGLKLQ-----GNFYNDAVIDpyMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSlFQTGfd 212
Cdd:TIGR01779 102 LIDGIRFGsaaagAADFQQLPVE--LVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLD-YQEY-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 213 fsdsldddgvysyrltglarSANAQQKGSEEQRYAIApaftwrpddktnftfLSYFQNEpetGYYGWLPKEGTVEPLPNG 292
Cdd:TIGR01779 177 --------------------SIASGVAIGENGWYSVA---------------LGTESTK---GINVRPGGPGVYDPDRDG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 293 KRlptdfnegaKNNTYSRNEkmvgysfdHEFNDTFTVRQNLRFAENKTsQNSVYGYGVCSDPANAYSKQCAALAPADKGH 372
Cdd:TIGR01779 219 FR---------SDSLLLGGG--------HRFDESWSLFVNALRYENRN-DYDNYSFGTRLYKEAEKGDQSFTGGRQRQSE 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 373 YLARKYVVDDEKLQNFSvDTQLQSKFatgdidhtlLTGVDFMRMRNdinawfgyddsVPLLNLY--NPVNT---DFDFNA 447
Cdd:TIGR01779 281 RDVSELTLSTGKSKDWD-YAYSKGRY---------SSTSDTREQRN-----------IQWQNDLlvGDGWVlagGVDWQK 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 448 KDPANSGPYRILNkQKQTGVYVQDQAQWdkvlvtlgGRYDWadQESLNRvagttdkRDDKQF----TWRGGVNYLFDNGV 523
Cdd:TIGR01779 340 DSIISSTADKEDD-RSNTAAFAQVLQQW--------GQQLL--EASLRR-------DDNQQFgshtTGSIAWGYQFIEEL 401
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 524 TPYFSYSESFEPSS---QVGKD-GNI-FAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLtktNNLMA-DPEGSFFSVEGGE 597
Cdd:TIGR01779 402 RFTASYGTAFKAPNlnqLYYPSyGNPnLQPETSKSAELGFYGLFSGGKWSISGYRTKI---NDLIDyDSHPKGYPNNIGE 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 598 IRARGVEIEAKAALsASVNVVGSYTYTDAEYTTDttykGNTPAQVPKHMASLWADYTFFDgplsgLTLGTGGRYTGSSYG 677
Cdd:TIGR01779 479 ARIKGVEATAEFAT-GGWTHQLSVDLLDAQNVNT----GNTLPRRARQMYKWNADRAFEQ-----FDWGASYQYVGKRYD 548
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 16128143 678 DPANSF-----KVGSYTVVDALVRYDLArvgmAGSNVALHVNNLFDREY 721
Cdd:TIGR01779 549 DDYNTYptqnvRLGGYSLLDLRVSYYVT----DSWTVQGRIANLFDKDY 593
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
14-264 |
4.07e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 79.04 E-value: 4.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 14 RKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESawgpaatiaarqsatgtktdtpIQKVPQSISVVTAEEMAL 93
Cdd:PRK13513 9 HKAALVIAAAISSQAYAAEKTNTATPTDTMVVTASGFQQR----------------------IQDAPASISVVTREQLEN 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 94 HQPKSVKEALSYTPGVSVgTRGASNTydHLIIRGFAAE--------------GQSQNNYLNGLKlQGNFYNDAVIdpyml 159
Cdd:PRK13513 67 KAYRDVTDALKDVPGVVV-TGGGSTS--DISIRGMAAKytlilvdgkrvdtrSTRPNSDGSGIE-QGWLPPLAAI----- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 160 ERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQ----FKAGTDS--LFQTgFDFSDSLDDDGVYSYRLTGL--A 231
Cdd:PRK13513 138 ERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWHGSLRadatLQEDSKSgdIFQT-NAYASGPLIDGLLGLKVSGLlsH 216
|
250 260 270
....*....|....*....|....*....|....
gi 16128143 232 RSANAQQKGSEEQRYAIAPA-FTWRPDDKTNFTF 264
Cdd:PRK13513 217 RSEDKIIDGYNEQRMRNGTAtFSLTPDDNNEFDF 250
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
16-192 |
8.39e-09 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 58.87 E-value: 8.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 16 IAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAatiaarqsatgtktdtpiqkvpqSISVVTAEEMALHQ 95
Cdd:PRK13484 7 IAPGIAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPA-----------------------SVSVITSEQLQKKP 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 96 PKSVKEALSYTPGVSVgtRGASNTYDhLIIRGFAAE-------GQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGP 168
Cdd:PRK13484 64 VSDLVDAVKDVEGISI--TGGNEKPD-ISIRGLSGDytlilvdGRRQSGRESRPNGSGGFEAGFIPPVEAIERIEVIRGP 140
|
170 180
....*....|....*....|....
gi 16128143 169 VSVLYGKSSPGGLLNMVSKRPTTE 192
Cdd:PRK13484 141 MSSLYGSDAIGGVINIITKPVNNQ 164
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
18-188 |
3.65e-08 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 56.82 E-value: 3.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 18 VVVATAVSGMSV-YAQAAVEPKEDTITVTAAPAPQESAWGPAatiaarqsatgtktdtpiqkvpqSISVVTAEEMALHQP 96
Cdd:PRK10064 8 VRVGLCASAISCaWPVLAVDDDGETMVVTASAVEQNLKDAPA-----------------------SISVITQEDLQRKPV 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 97 KSVKEALSYTPGVS----------VGTRGASNTYDHLIIRGfaaegqSQNNYLNGLkLQGNFYNDAVIDPYMLERAEIMR 166
Cdd:PRK10064 65 QNLKDVLKEVPGVQltnegdnrkgVSIRGLDSSYTLILIDG------KRVNSRNAV-FRHNDFDLNWIPVDAIERIEVVR 137
|
170 180
....*....|....*....|..
gi 16128143 167 GPVSVLYGKSSPGGLLNMVSKR 188
Cdd:PRK10064 138 GPMSSLYGSDALGGVVNIITKK 159
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
13-192 |
2.32e-07 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 54.27 E-value: 2.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 13 LRKIAVVVATAVSGMSVYAQAAVE-------PKEDTITVTAApapQEsawgpaatiaARQsATGTktdtpiqkvpqsiSV 85
Cdd:PRK13524 5 IHSLALLVNLGIYGVAQAAEAEDAktddtpaSHEDTIVVTAA---EQ----------NLQ-APGV-------------ST 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 86 VTAEEMALHQP-KSVKEALSYTPGVSV------GTRGASNTYDhliIRGFAAEG----------QSQNNYLNGLKLQGNF 148
Cdd:PRK13524 58 ITAEDIRKRPPaNDVSEIIRTMPGVNLtgnstsGQRGNNRQID---IRGMGPENtlilidgkpvSSRNSVRYGWRGERDT 134
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 16128143 149 YND-AVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTE 192
Cdd:PRK13524 135 RGDtNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTGE 179
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
68-721 |
3.69e-07 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 53.49 E-value: 3.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 68 TGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSV--GT----------RGASNTYDHLIIRGfAAEGQSQ 135
Cdd:PRK13486 31 SASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVesGTgktggleisiRGMPASYTLILIDG-VRQGGSS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 136 NNYLNGLKLQgnfyNDAVIDPY-MLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFS 214
Cdd:PRK13486 110 DVTPNGFSAM----NTGFMPPLaAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESNKWGNSSQ 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 215 DSLDDDG-VYSYRLTGLARSANAQQKGS-----------------EEQRYAIAPAFTWRPDDKTNFTFlsyfqnEPETGY 276
Cdd:PRK13486 186 FNFWSSGpLVDDSVSLQVRGSTQQRQGSsvtslsdtaatripyptESQNYNLGARLDWKASEQDVLWF------DMDTTR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 277 YGWLPKEGTVEPLPNGKRlptdfnegaKNNTYSRNEKMVGYsfDHEFN-DTFTVRQNLRFAENKTSQNSvygygvcsdpA 355
Cdd:PRK13486 260 QRYDNRDGQLGSLTGGYD---------RTLRYERNKISAGY--DHTFTfGTWKSYLNWNETENKGRELV----------R 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 356 NAYSKQCAALAPADKghylarkyvvdDEKLQNFSVDTQLQSKFATgdiDHTLLTGVDFMRMRndinawfgYDDSVPLlnl 435
Cdd:PRK13486 319 SVLKRDKWGLAGQPR-----------ELKESNLILNSLLLTPLGE---SHLVTVGGEFQSSS--------MKDGVVL--- 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 436 ynpvntdfdfnakdpANSGPYRilnKQKQTGVYVQDqaQW---DKVLVTLGGRYDWADQeslnrVAGTTDKRddKQFTWR 512
Cdd:PRK13486 374 ---------------ASTGETF---RQKSWSVFAED--EWhltDALALTAGSRYEHHEQ-----FGGHFSPR--AYLVWD 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 513 GGVNYLFDNGVTPYF---SYSESFEPSSQVGKDGNI-------FAPSKGKQYEVGVKYvpeDRpivVTGAVYNLTK---- 578
Cdd:PRK13486 427 VADAWTLKGGVTTGYkapRMGQLHKGISGVSGQGKTnllgnpdLKPEESVSYEAGVYY---DN---PAGLNANVTGfmtd 500
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 579 -TNNLMA----DPEGSFfsVEGGEIRARGVEIEAKAAL-SASVNVVGSYTYTDAEyTTDTTYKGNTPAQVPKHMASLWAD 652
Cdd:PRK13486 501 fSNKIVSysinDNTNSY--VNSGKARLHGVEFAGTLPLwSEDVTLSLNYTWTRSE-QRDGDNKGAPLSYTPEHMVNAKLN 577
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 653 YTFFDGPLSGLtlgtGGRYTGSS-----------------YGDPANSFKvgSYTVVDALVRYDLARVGMAgsNVAlhVNN 715
Cdd:PRK13486 578 WQITEEVASWL----GARYRGKTprftqnysslsavqkkvYDEKGEYLK--AWTVVDAGLSWKMTDALTL--NAA--VNN 647
|
....*.
gi 16128143 716 LFDREY 721
Cdd:PRK13486 648 LLNKDY 653
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
56-190 |
2.92e-06 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 50.91 E-value: 2.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 56 GPAATIAARQSATGTKTDTPI------QKVPQS--ISVVTAEEMALHQP-KSVKEALSYTPGV------SVGTRGASNTY 120
Cdd:PRK13528 18 GLNSPVSAAESSDDDNGETMVveataeQELKQQpgVSIITAEDIKKRPPvNDLSDIIRKMPGVnltgnsASGTRGNNRQI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 121 DhliIRGFAAEG----------QSQNNYLNGLKLQGNFYNDA-VIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRP 189
Cdd:PRK13528 98 D---IRGMGPENtlilidgvpvTSRNSVRYSWRGERDTRGDTnWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRP 174
|
.
gi 16128143 190 T 190
Cdd:PRK13528 175 T 175
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
14-721 |
5.89e-06 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 49.61 E-value: 5.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 14 RKIAVVVATAVSGMSVYAQAAvepKEDTITVTAAPAPQesawgpaatiaarqsatgtktdtPIQKVPQSISVVTAEEMAL 93
Cdd:PRK10641 3 KKASLLTALSVTAFSGWAQDT---SPDTLVVTANRFQQ-----------------------PVSTVLAPTTVVTRDDIDR 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 94 HQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqSQNNYL-NGLKL-QGNFYNDAVIDPY---MLERAEIMRGP 168
Cdd:PRK10641 57 WQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNS---SHVLVLiDGVRLnQAGISGSADLSQIpisLVQRIEYIRGP 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 169 VSVLYGKSSPGGLLNMVSKRPTteplKEVQFKAGTDSlfqtgfdfsdslddDGVYSYrltglarsanaqqKGSEEQRYAi 248
Cdd:PRK10641 134 RSAVYGSDAIGGVVNIITTRDK----PGTTLSAGWGS--------------NGYQNY-------------DGSTQQQLG- 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 249 apaftwrpdDKTNFTFLSYFQNepeTGYYGWLPKEGTVEPlPNGKRlptdfnEGAKNntysrneKMVGYSFDHEFNDTFT 328
Cdd:PRK10641 182 ---------DNTRVTLAGDYTY---TKGFDVVAYGNTGTQ-AQPDR------DGFMS-------KTLWGGLEHQFNDQWS 235
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 329 --VRqnlrfaenktsqnsVYGYgvcsDPANAYSkqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLqsKFATGDIDHT 406
Cdd:PRK10641 236 gfVR--------------GYGY----DNRTDYD-----------AYYSPGSPLIDTRQLYSQSWDAGL--RYNGGIYSSQ 284
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 407 LLTGVDFMRMRNDINAWFGYDDSVPLLNL--YN------------PVNTDFDFNAKDPANSGPYRILN-KQKQTGVYVQD 471
Cdd:PRK10641 285 LIASYSHSKDYNYDPHYGRYDSSATLDDMkqYNvqwgntvqvghgNISAGVDWQKQTTTPGTGYVPDGyDQRNTGIYLTG 364
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 472 QAQWDKVLVTLGGRYDwadqeslnrvagttdkrDDKQF----TWRGGVNYLFDNGVTPYFSYSESFE-PS--SQVGKDGN 544
Cdd:PRK10641 365 QQQIGDVTLEGAARSD-----------------DNSQFgwhgTWQTSAGWEFIDGYRFIASYGTAFKaPNlgQLYGFYGN 427
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 545 I-FAPSKGKQYEVGVKYvpedrpivVTGAV-YNLT----KTNNLMA--DPEGSFFSVegGEIRARGVEIEAK---AALSA 613
Cdd:PRK10641 428 PnLKPEESKQWEGGFEG--------LTGPVnWRLSgyrnDIDNLIDydDHTLKYYNV--GKATIKGVEWTGNfdtGPLTH 497
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128143 614 SVnvvgSYTYTDAEytTDTTykgNTP-AQVPKHMASLWADYTFFDgplsgLTLGTGGRYTGSSY-----GDPANSFKVGS 687
Cdd:PRK10641 498 QV----TLDYVDPR--NAIT---DEPlARRAKQQVKYQLDWQLYD-----FDWGVTYQYLGTRYdkdysTYPYQTVKLGG 563
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 16128143 688 YTVVDALVRYDlarvgmagsnVALH------VNNLFDREY 721
Cdd:PRK10641 564 VSLWDLAVSYP----------VTSHltvrgkIANLFDKDY 593
|
|
| |
