|
Name |
Accession |
Description |
Interval |
E-value |
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
1-455 |
0e+00 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 803.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQ 80
Cdd:PRK10580 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
Cdd:PRK10580 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 161 IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 241 MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK10580 241 MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
Cdd:PRK10580 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAE 455
Cdd:PRK10580 401 GVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-449 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 603.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:COG1113 8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG1113 88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMI-VAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
Cdd:COG1113 168 AFIvVGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 241 MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:COG1113 248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
Cdd:COG1113 328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRH 449
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
3-448 |
3.69e-87 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 273.67 E-value: 3.69e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQEN 82
Cdd:TIGR01773 6 SGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 83 LGPLAGYITGWTYC-FEILIVAIADVTAFGIyMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:TIGR01773 86 IGRWAGFTIGWLYWwFWVLVIPLEAIAAAGI-LQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAII 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMIVaGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
Cdd:TIGR01773 165 AFII-LGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIW 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 242 RILVFYVGTLFVIMSIYPWNQVG-TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:TIGR01773 244 RIIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRL--PPEEVKALKFKV 398
Cdd:TIGR01773 324 VFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLkaNGEAIKIRMWLY 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 16128387 399 PGGVATTIGGLIFLLFIIGLIGYHPDTRISlyVGFAWIVVLLIGWMFKRR 448
Cdd:TIGR01773 404 PWLTWLVIIFICGILVSMLFIPSMRDEVLL--TGLLTIIVLCSYLVFARR 451
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
15-448 |
2.62e-84 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 266.49 E-value: 2.62e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 15 HIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGW 93
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 94 TYCFEILIVAIADVTAFGIYMGVW--FPTVPH-WIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVagFGI 170
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFII--VGI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 171 IIWGIGNGGQPTGIHNLWSNGG--FFSNGWLGMVMS-LQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFY 247
Cdd:pfam00324 159 ILLSGGNPNDGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 248 VGTLFVIMSIYPWNQVG------TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEE--VKALKFKVP 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGrsIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16128387 400 GGVATTIGGLIFLLFIIGLIGYHPDTR-------------ISLYVGFAWIVVLLIGWMFKRR 448
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVK 460
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
1-455 |
0e+00 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 803.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQ 80
Cdd:PRK10580 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
Cdd:PRK10580 81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 161 IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 241 MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:PRK10580 241 MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
Cdd:PRK10580 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAE 455
Cdd:PRK10580 401 GVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLLLIGWMFKRRHDRQLAE 455
|
|
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-449 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 603.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:COG1113 8 SEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYARE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG1113 88 YLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMI-VAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
Cdd:COG1113 168 AFIvVGLLLIFFGFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 241 MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:COG1113 248 WRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPK 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPG 400
Cdd:COG1113 328 FFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRH 449
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456
|
|
| LysP |
COG0833 |
Amino acid permease [Amino acid transport and metabolism]; |
1-448 |
1.63e-131 |
|
Amino acid permease [Amino acid transport and metabolism];
Pssm-ID: 440595 [Multi-domain] Cd Length: 467 Bit Score: 387.99 E-value: 1.63e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYA 79
Cdd:COG0833 4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 80 QENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVAT 159
Cdd:COG0833 84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVIT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 160 IIIMIVAGFGIIIWGIGNggQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSV 239
Cdd:COG0833 164 VIAFIIVGLLMIFGIIGG--HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 240 PMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP 319
Cdd:COG0833 242 FWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 320 KIFSKTSRRGIPwVTVLVMTTALLFAVYLNYIM-PENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPE--EVKALKF 396
Cdd:COG0833 322 KIFAKLNKRGVP-LNALLATMAVGLLALLSSFFgAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQggDLEDLKY 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 16128387 397 KVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRR 448
Cdd:COG0833 401 KAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKK 452
|
|
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
7-454 |
5.10e-125 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 371.37 E-value: 5.10e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 7 LKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPL 86
Cdd:PRK11049 18 LRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPW 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 87 AGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVA 166
Cdd:PRK11049 98 AGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVV 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 167 GFGIIIWGIGnggQPTG----IHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMR 242
Cdd:PRK11049 178 GLVMVAMHFQ---SPTGveasFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIR 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 243 ILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIF 322
Cdd:PRK11049 255 IIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAF 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 323 SKTSRRGIPWVTVLVMTTALLFAVYLNYIMPE--NVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEvKALKFKVPG 400
Cdd:PRK11049 335 AKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLH-EKSIYKMPL 413
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLA 454
Cdd:PRK11049 414 GKLMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAEL 467
|
|
| PRK10238 |
PRK10238 |
aromatic amino acid transporter AroP; |
5-448 |
9.36e-117 |
|
aromatic amino acid transporter AroP;
Pssm-ID: 182324 [Multi-domain] Cd Length: 456 Bit Score: 350.02 E-value: 9.36e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 5 NKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLG 84
Cdd:PRK10238 8 EQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 85 PLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMI 164
Cdd:PRK10238 88 SFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMI 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 165 VaGFGIIIWGIGNGGQPTgIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRIL 244
Cdd:PRK10238 168 I-FGGWLLFSGNGGPQAT-VSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRIL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 245 VFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSK 324
Cdd:PRK10238 246 IFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALAS 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 325 TSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRlppEEVKALKFKVPgGVAT 404
Cdd:PRK10238 326 VDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRA---KQEQGVVTRFP-ALLY 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 16128387 405 TIGGLIFLLFIIG---LIGYHPDTRISLYVGFAWIVVLLIGWMFKRR 448
Cdd:PRK10238 402 PLGNWICLLFMAAvlvIMLMTPGMAISVYLIPVWLIVLGIGYLFKEK 448
|
|
| PRK10249 |
PRK10249 |
phenylalanine transporter; Provisional |
2-448 |
1.85e-116 |
|
phenylalanine transporter; Provisional
Pssm-ID: 236667 Cd Length: 458 Bit Score: 349.28 E-value: 1.85e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:PRK10249 14 NQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYK 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:PRK10249 94 YWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAII 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMIvaGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
Cdd:PRK10249 174 GMI--GFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 242 RILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
Cdd:PRK10249 252 RILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFR--RRLPPEEVKALKFKVP 399
Cdd:PRK10249 332 LTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRaaMRRQGRETQFKALLYP 411
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 16128387 400 GGVATTIGgliFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRR 448
Cdd:PRK10249 412 FGNYLCIA---FLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRR 457
|
|
| PRK10746 |
PRK10746 |
putative transport protein YifK; Provisional |
2-446 |
2.07e-110 |
|
putative transport protein YifK; Provisional
Pssm-ID: 182694 Cd Length: 461 Bit Score: 333.71 E-value: 2.07e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:PRK10746 3 DNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:PRK10746 83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTII 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
Cdd:PRK10746 163 VMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 242 RILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
Cdd:PRK10746 243 RILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIM--PENVFLVIASLATFATVWVWIMILLSQIAFRRRlPPEEVKALKFKVP 399
Cdd:PRK10746 323 MAKVSRHGVPVAGVAVSILILLVGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRRA-HKAAIASHPFRSI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 16128387 400 GGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWI-VVLLIGWMFK 446
Cdd:PRK10746 402 LFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLlAVTLIYKVFG 449
|
|
| PRK15049 |
PRK15049 |
L-asparagine permease; |
9-448 |
1.41e-88 |
|
L-asparagine permease;
Pssm-ID: 185009 Cd Length: 499 Bit Score: 278.81 E-value: 1.41e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 9 RGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAG 88
Cdd:PRK15049 28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 89 YITGWTYCFEILIVAIADVTAFGIYMGVW--FPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVA 166
Cdd:PRK15049 108 YVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVV 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 167 GFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVF 246
Cdd:PRK15049 188 GTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLF 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 247 YVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTS 326
Cdd:PRK15049 268 YVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMS 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 327 RRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTI 406
Cdd:PRK15049 348 RQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSW 427
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 16128387 407 GGLIFLLFIIGLIGY-HPDTRISLYVGFAWIVVLLIGWMFKRR 448
Cdd:PRK15049 428 LTLLFLLSVLVLMAFdYPNGTYTIAALPIIGILLVIGWFGVRK 470
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
3-448 |
3.69e-87 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 273.67 E-value: 3.69e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQEN 82
Cdd:TIGR01773 6 SGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 83 LGPLAGYITGWTYC-FEILIVAIADVTAFGIyMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:TIGR01773 86 IGRWAGFTIGWLYWwFWVLVIPLEAIAAAGI-LQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAII 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMIVaGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
Cdd:TIGR01773 165 AFII-LGAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIW 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 242 RILVFYVGTLFVIMSIYPWNQVG-TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
Cdd:TIGR01773 244 RIIVFYLGSIFIVVALLPWNSPNlLEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRL--PPEEVKALKFKV 398
Cdd:TIGR01773 324 VFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLkaNGEAIKIRMWLY 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 16128387 399 PGGVATTIGGLIFLLFIIGLIGYHPDTRISlyVGFAWIVVLLIGWMFKRR 448
Cdd:TIGR01773 404 PWLTWLVIIFICGILVSMLFIPSMRDEVLL--TGLLTIIVLCSYLVFARR 451
|
|
| PRK11387 |
PRK11387 |
S-methylmethionine permease; |
1-455 |
4.98e-85 |
|
S-methylmethionine permease;
Pssm-ID: 236904 Cd Length: 471 Bit Score: 268.64 E-value: 4.98e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYA 79
Cdd:PRK11387 6 SQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 80 QENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVAT 159
Cdd:PRK11387 86 ARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 160 IIIMIV--AGFGIIIWGIGNGGQPTGIHNLWSNGgFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAIN 237
Cdd:PRK11387 166 ILAFIVlgGAAIFGFIPMQDGSPAPGLRNLTAEG-WFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 238 SVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317
Cdd:PRK11387 245 TTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGT 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 318 APKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPE--EVKALK 395
Cdd:PRK11387 325 LPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHLRDgkALSELA 404
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16128387 396 FKVPGGVATTI-GGLIFLLFIIGLiGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAE 455
Cdd:PRK11387 405 YRAPWYPLTPIlGFVLCLLACVGL-AFDPSQRIALWCGIPFVALCYGAYYLTQRLKRNMTQ 464
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
15-448 |
2.62e-84 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 266.49 E-value: 2.62e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 15 HIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGW 93
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 94 TYCFEILIVAIADVTAFGIYMGVW--FPTVPH-WIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVagFGI 170
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFII--VGI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 171 IIWGIGNGGQPTGIHNLWSNGG--FFSNGWLGMVMS-LQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFY 247
Cdd:pfam00324 159 ILLSGGNPNDGAIFRYLGDNGGknNFPPGFGKGFISvFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 248 VGTLFVIMSIYPWNQVG------TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 322 FSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEE--VKALKFKVP 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGrsIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16128387 400 GGVATTIGGLIFLLFIIGLIGYHPDTR-------------ISLYVGFAWIVVLLIGWMFKRR 448
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPvpggpknwgagsfAAAYLIVLLFLIILIGVKLHVK 460
|
|
| 2A0310 |
TIGR00913 |
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines] |
8-421 |
5.09e-74 |
|
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334 Cd Length: 478 Bit Score: 240.26 E-value: 5.09e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 8 KRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGIAAYIIMRALGEMSVHNPAAS-SFSRYAQENLGP 85
Cdd:TIGR00913 1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSgSFATYASRFVDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIV 165
Cdd:TIGR00913 81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 166 aGFGIIIWGIGNGGQPTGIHnLWSNGGFFSNG-----WLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
Cdd:TIGR00913 161 -LSIILNCGGGPNHGYIGFR-YWHDPGAFAGGtiggrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 241 MRILVFYVGTLFVIMSIYPWN---------QVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHG 311
Cdd:TIGR00913 239 WRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 312 MAEQGSAPKIFSKTSRRGIPWVTVLVmTTALLFAVYLNYIMPE-NVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEE 390
Cdd:TIGR00913 319 LAHQGLAPKIFAYVDRRGVPYVAVIV-SSLFGLLAFLAVSKKEaEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQG 397
|
410 420 430
....*....|....*....|....*....|...
gi 16128387 391 V--KALKFKVPGGVATTIGGLIFLLFIIGLIGY 421
Cdd:TIGR00913 398 RslDELPYKSQTGPYGSYYALFFNILILIAQGY 430
|
|
| PRK10836 |
PRK10836 |
lysine transporter; Provisional |
7-384 |
1.35e-70 |
|
lysine transporter; Provisional
Pssm-ID: 182767 Cd Length: 489 Bit Score: 231.63 E-value: 1.35e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 7 LKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGP 85
Cdd:PRK10836 13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIV 165
Cdd:PRK10836 93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 166 aGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILV 245
Cdd:PRK10836 173 -VGVLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 246 FYVGTLFVIMSIYPW-------NQVG-TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGS 317
Cdd:PRK10836 252 FYVFAILIISLIIPYtdpsllrNDVKdISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGK 331
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16128387 318 APKIFSKTSRRGIP----WVTVLVMTTALLFAVYLNyimpENVFLVIASLATFATVWVWIMILLSQIAFRR 384
Cdd:PRK10836 332 APRIFAKLSRGGVPrnalYATTVIAGLCFLTSMFGN----QTVYLWLLNTSGMTGFIAWLGIAISHYRFRR 398
|
|
| PRK10197 |
PRK10197 |
GABA permease; |
19-416 |
4.96e-60 |
|
GABA permease;
Pssm-ID: 182297 Cd Length: 446 Bit Score: 202.93 E-value: 4.96e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 19 MALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFE 98
Cdd:PRK10197 2 LSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 99 ILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIvAGFGIIIWGIGNG 178
Cdd:PRK10197 82 WVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFI-FLGAVAISGFYPY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 179 GQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIY 258
Cdd:PRK10197 161 AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 259 PWNQVG-TAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLV 337
Cdd:PRK10197 241 PWNMPGlKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 338 MTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPE--EVKALKFKVPGGVATTIGGLIFLLFI 415
Cdd:PRK10197 321 STGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEgsEIRLRMWLYPWLTWLVIGFITFVLVV 400
|
.
gi 16128387 416 I 416
Cdd:PRK10197 401 M 401
|
|
| PotE |
COG0531 |
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; |
2-455 |
1.34e-56 |
|
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain] Cd Length: 438 Bit Score: 193.58 E-value: 1.34e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 2 ESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:COG0531 4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATII 161
Cdd:COG0531 84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 162 IMIVAGFgiiiwgignggqPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPM 241
Cdd:COG0531 164 LFIVVGL------------FAFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 242 RILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKI 321
Cdd:COG0531 232 IVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKV 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 322 FSKTS-RRGIPWVTVLVMTTALLFAVylnyIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEvkaLKFKVPG 400
Cdd:COG0531 312 FAKVHpRFGTPVNAILLTGVIALLLL----LLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLP---RPFRVPL 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 16128387 401 GVATTIGGLIFLLFIIGLIGYhpdtriSLYVGFAWIVV-LLIGWMFKRRHDRQLAE 455
Cdd:COG0531 385 PLIPILGILLCLFLLYLLGPG------ALLIGLVLLAIgLLLYLLYRRRHPKLLKE 434
|
|
| AA_permease_2 |
pfam13520 |
Amino acid permease; |
18-443 |
9.80e-24 |
|
Amino acid permease;
Pssm-ID: 404414 [Multi-domain] Cd Length: 427 Bit Score: 102.77 E-value: 9.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 18 FMALGSAIGTGLFYGSAdaIKMAGPSVLLAYIIGGIAAYIIMR-ALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYC 96
Cdd:pfam13520 8 ALVIGSVIGSGIFVAPL--VASGGPALIVWGWIAAIIFSLAVGlVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNW 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 97 FEILIVAIA-DVTAFGIYMGVWFPTVPHWIWVL-----SVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGI 170
Cdd:pfam13520 86 FAYVLGLASsASVAASYLLSALGPDLVPTTWLTygiaiAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 171 IIWgignggQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKdpEKSIPRAINSVPMRILVFYVGT 250
Cdd:pfam13520 166 TAD------GGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK--KRNVPKAIFIGVIIVGVLYILV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 251 LFVIMSIYPWNQV---GTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAP--KIFSKT 325
Cdd:pfam13520 238 NIAFFGVVPDDEIalsSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 326 SRRGIPWVTVLVmTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEvkalkfKVPGGVATT 405
Cdd:pfam13520 318 NKFGSPIRAIIL-TAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLG------RIPGRWPVA 390
|
410 420 430
....*....|....*....|....*....|....*...
gi 16128387 406 IGGLIFLLFIIgLIGYHPDTRISLYVGFAWIVVLLIGW 443
Cdd:pfam13520 391 IFGILFSLFLI-VALFFPPVGPATGSSLNYAIILIVAF 427
|
|
| 2A0303 |
TIGR00906 |
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ... |
3-452 |
3.14e-19 |
|
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain] Cd Length: 557 Bit Score: 90.26 E-value: 3.14e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 3 SKNKLKRGLSTRHIRFMALGSAIGTGLF-YGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQE 81
Cdd:TIGR00906 22 EESKMKRCLTTWDLMALGIGSTIGAGIYvLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 82 NLGPLAGYITGWTYCFEILI----VAIADVTAFG------------IYMGVWFPTVPHW--IWVLSVVLIICAVNLMSVK 143
Cdd:TIGR00906 102 TVGELWAFITGWNLILEYVIgtaaVARSWSAYFDellnkqigqfrrTYFKLNYDGLAEYpdFFAVCLILLLAVLLSFGVK 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 144 VFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGihnlwsNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAG 223
Cdd:TIGR00906 182 ESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEKG------AGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 224 EAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTaGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVF 303
Cdd:TIGR00906 256 EVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP-DAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMF 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 304 GVGRMLHGMAEQGSAPKIFSK-TSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAF 382
Cdd:TIGR00906 335 PLPRVIYAMARDGLLFKWLAQiNSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPGL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 383 -------------RRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTR----ISLYVGFAWIVVLLIGWMF 445
Cdd:TIGR00906 415 vydqakdtdekdtLDSWVPFTSKSESQSEGFSLRTLFSGLILGLSILTTYGRAAIAEeawsIALLTLFLVLFLLVVLTIW 494
|
....*..
gi 16128387 446 KRRHDRQ 452
Cdd:TIGR00906 495 RQPQNKQ 501
|
|
| 2A0308 |
TIGR00911 |
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ... |
22-443 |
1.35e-11 |
|
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain] Cd Length: 501 Bit Score: 66.31 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 22 GSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRAL--GEMSVHNPAASSFSRYAQENLGPLAGYITGWtycFEI 99
Cdd:TIGR00911 55 GTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALvyAELGTTIPKSGGEYNYILEVFGPLLAFLRLW---IEL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 100 LIV----AIADVTAFGIY-MGVWFPTVPHWIWVLS-----VVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFG 169
Cdd:TIGR00911 132 LVIrpgsQAVNALNFAIYiLTPVFPDCEVPEWAIRlvavlCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 170 IIIWGignggqptGIHNLWSNGGF--FSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAInSVPMRILVF- 246
Cdd:TIGR00911 212 QLGKG--------GVESLNPKNAFegTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAI-IISMPIVTFi 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 247 YVGTLFVIMSIYPWNQVgTAGSPFVLTF--QHMGItFAASILNFVVLTAsLSAINSDVFGVGRMLHGMAEQGSAPKIFSK 324
Cdd:TIGR00911 283 YVLTNIAYFTVLSPEEL-LASLAVAVDFgeRLLGV-MSWAMPALVGLSC-FGSVNGSLFSSSRLFFVGGREGHLPSLLSM 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 325 TSRR---GIPWVTVLVMTTALlfavylnYIMPENVFLVIaSLATFATVWVWIMILLSQIAFRRRLPPEEVkalKFKVPgg 401
Cdd:TIGR00911 360 IHVKrltPLPSLLIVCTLTLL-------MLFSGDIYSLI-NLISFANWLFNALAVAGLLWLRYKRPEMNR---PIKVP-- 426
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 16128387 402 VATTIGGLIFLLFIIGLIGYHPDTRISLYVGfawivVLLIGW 443
Cdd:TIGR00911 427 LFFPVFFLLSCLFLIILSLYSPPVGCGVGFI-----IMLTGV 463
|
|
| potE |
PRK10655 |
putrescine transporter; Provisional |
78-339 |
2.18e-08 |
|
putrescine transporter; Provisional
Pssm-ID: 182622 Cd Length: 438 Bit Score: 56.19 E-value: 2.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 78 YAQENLGPLAGYITGWTYCFEILI--VAIAdVTAFGiYMGVWFPT----VPHWIWVLSVVLIICAVNLMSVKVFGELefw 151
Cdd:PRK10655 74 YAEYAFGKSGNFMANYTYGVSLLIanVAIA-ISAVG-YGTELFGAtlspVQICLATIGVLWLCTVANFGGARITGQI--- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 152 fSFFKVATIIIMIVAGFGiiiwgignggqptgIHNLWSNGGFFSNGW--------LGMVMSLQMVMFAYGGIEIIGITAG 223
Cdd:PRK10655 149 -SSVTVWGVIIPVVGLSI--------------IGWFWFSPSLYVAAWnphhlpffSAVGSSIAMTLWAFLGLESACANSD 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 224 EAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMgitFAASILNFVVLTASLSAINSDV- 302
Cdd:PRK10655 214 AVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQM---FNPTVGKIVMALMVMSCCGSLLg 290
|
250 260 270
....*....|....*....|....*....|....*....
gi 16128387 303 --FGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMT 339
Cdd:PRK10655 291 wqFTIAQVFKSSADEGYFPKIFSRVTKVDAPVQGMLIIV 329
|
|
| PRK10644 |
PRK10644 |
arginine/agmatine antiporter; |
18-373 |
2.82e-08 |
|
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain] Cd Length: 445 Bit Score: 55.95 E-value: 2.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 18 FMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMrALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCF 97
Cdd:PRK10644 17 LMVAGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSM-VYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 98 EILIVAIADVTAFGIYMGVWFPTVPH----WIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFgiiiw 173
Cdd:PRK10644 96 ACWIGNIAMVVIGVGYLSYFFPILKDplvlTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGW----- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 174 gignggqptgihnLWSNGGFFSNGW-------LGMVMS-LQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILV 245
Cdd:PRK10644 171 -------------FWFRGETYMAAWnvsglgtFGAIQStLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 246 FYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKT 325
Cdd:PRK10644 238 CYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 16128387 326 SRRGIPWVTVLVMttALLFAVYLNYIMPENV---FLVIASLATFATVWVWI 373
Cdd:PRK10644 318 NKAGTPVAGLLIV--GVLMTIFQLSSISPNAskeFGLVSSVSVIFTLVPYL 366
|
|
| frlA |
PRK11357 |
amino acid permease; |
3-373 |
2.21e-06 |
|
amino acid permease;
Pssm-ID: 183096 [Multi-domain] Cd Length: 445 Bit Score: 49.85 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVL--LAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQ 80
Cdd:PRK11357 2 GSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 81 ENLGPLAGYITGWTyCF------EILIVAIADVTAFGIYMGvWFPTVPHWIWVLsVVLIICAVNLMSVKVFGELEFWFSF 154
Cdd:PRK11357 82 NAGSRPLAFLSGWA-SFwandapSLSIMALAIVSNLGFLTP-IDPLLGKFIAAG-LIIAFMLLHLRSVEGGAAFQTLITI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 155 FKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNlwsnggffSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPR 234
Cdd:PRK11357 159 AKIIPFTIVIGLGIFWFKAENFAAPTTTAIGA--------TGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 235 AINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGI------TFAAsILNFVVLTASLSainSDVFGVGRM 308
Cdd:PRK11357 231 ALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAlgstagIFVA-ITAMIVILGSLS---SCVMYQPRL 306
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16128387 309 LHGMAEQGSAPKIFSKTS-RRGIPWVTVLVMTTALLFAVYLNYIMP-ENVFLVIASLATFATVWVWI 373
Cdd:PRK11357 307 EYAMAKDNLFFKCFGHVHpKYNTPDVSIILQGALGIFFIFVSDLTSlLGYFTLVMCFKNTLTFGSII 373
|
|
| cadB |
PRK10435 |
cadaverine/lysine antiporter; |
65-343 |
9.05e-06 |
|
cadaverine/lysine antiporter;
Pssm-ID: 182458 Cd Length: 435 Bit Score: 47.82 E-value: 9.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 65 MSVHNPAASSFSRYAQEnLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT----VPHWIWVLSVVLIICAVNLM 140
Cdd:PRK10435 60 LATKNPQQGGPIAYAGE-ISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVlndpIPAGIACIAIVWVFTFVNML 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 141 SVKvfgelefWFSffKVATI-IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGffSNGWLGMVMSLQMVMFAYGGIEIIG 219
Cdd:PRK10435 139 GGT-------WVS--RLTTIgLVLVLIPVVGTAIVGWHWFDAATYAANWNTSD--TTDGHAIIKSILLCLWAFVGVESAA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 220 ITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAIN 299
Cdd:PRK10435 208 VSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLG 287
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 16128387 300 SDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVL---VMTTALL 343
Cdd:PRK10435 288 SWMMLVGQAGVRAANDGNFPKVYGEVDKNGIPKKGLLlaaVKMTALM 334
|
|
| 2A0309 |
TIGR00912 |
spore germination protein (amino acid permease); This model describes spore germination ... |
11-298 |
6.63e-04 |
|
spore germination protein (amino acid permease); This model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273333 Cd Length: 359 Bit Score: 41.89 E-value: 6.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 11 LSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPaASSFSRYAQENLGPLAGYI 90
Cdd:TIGR00912 3 ISSKQLIFLISSTMIGSGLLTLPALVSQSAGQDGWISIILGGLIIIFLLCLMIKIMSKFP-EKNFSEILSKYLGKILGRL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 91 TGWTYCFEILIVAIADVTAFGIYMGVW-FPTVPhwIWVLSVVLIICAVNLMSvKVFGELEFWFSFFKVATIIIMIVAGFG 169
Cdd:TIGR00912 82 LSILFILYFFLIAAYLIRIFADFIKTYlLPRTP--IIVIIILIIIVSIYIVR-KGIEVLLRTAEILLIIFLILFILVLIL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128387 170 IiiwgignggqPTGIHNLWSNGGFFSNGWLG-MVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILvFYV 248
Cdd:TIGR00912 159 L----------APKLGNIKNLLPVLENGLSPiLKGAYPVVTFAFGEIEIFFLLFPLLSKKKKIKKSIIKAIIIGVL-LYI 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 16128387 249 GTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAI 298
Cdd:TIGR00912 228 LTTFVSISVFGGNVTKNLYWPTLELIKLINIGDFIERFELIVMTFWVFII 277
|
|
| |
