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Conserved domains on  [gi|16128730|ref|NP_415283|]
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multidrug efflux pump accessory protein AcrZ [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

AcrZ domain-containing protein( domain architecture ID 10566676)

AcrZ domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AcrZ pfam10766
Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug ...
 1-48 2.25e-19

Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.


:

Pssm-ID: 431482  Cd Length: 48  Bit Score: 72.09  E-value: 2.25e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 16128730    1 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQN 48
Cdd:pfam10766  1 MLELLKSLVFAVIMVPVVMAVILGLIYGLGEVFNVISKVGHRDQSRQN 48
 
Name Accession Description Interval E-value
AcrZ pfam10766
Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug ...
 1-48 2.25e-19

Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.


Pssm-ID: 431482  Cd Length: 48  Bit Score: 72.09  E-value: 2.25e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 16128730    1 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQN 48
Cdd:pfam10766  1 MLELLKSLVFAVIMVPVVMAVILGLIYGLGEVFNVISKVGHRDQSRQN 48
 
Name Accession Description Interval E-value
AcrZ pfam10766
Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug ...
 1-48 2.25e-19

Multidrug efflux pump-associated protein AcrZ; AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.


Pssm-ID: 431482  Cd Length: 48  Bit Score: 72.09  E-value: 2.25e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 16128730    1 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQN 48
Cdd:pfam10766  1 MLELLKSLVFAVIMVPVVMAVILGLIYGLGEVFNVISKVGHRDQSRQN 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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