|
Name |
Accession |
Description |
Interval |
E-value |
| glnP |
PRK09494 |
glutamine ABC transporter permease protein; Reviewed |
1-219 |
1.72e-140 |
|
glutamine ABC transporter permease protein; Reviewed
Pssm-ID: 181907 [Multi-domain] Cd Length: 219 Bit Score: 391.34 E-value: 1.72e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 1 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM 80
Cdd:PRK09494 1 MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 81 AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK 160
Cdd:PRK09494 81 AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIK 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 16128778 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL 219
Cdd:PRK09494 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKIL 219
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
1-218 |
1.05e-82 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 244.98 E-value: 1.05e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 1 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM 80
Cdd:COG0765 1 MFFDFSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFGLPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 81 AfnDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK 160
Cdd:COG0765 81 L--GIDLSPFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGNEFISLLK 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 16128778 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218
Cdd:COG0765 159 DTSLVSVIGVPELTRAAQQIASRTFRPFEVYLVAALIYLVLTLPLSLLARRLERRLAR 216
|
|
| ectoine_ehuC |
TIGR03004 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ... |
12-217 |
4.95e-40 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.
Pssm-ID: 132049 [Multi-domain] Cd Length: 214 Bit Score: 136.52 E-value: 4.95e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 12 IPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAfnDLRIDPFT 91
Cdd:TIGR03004 4 LPLLLQGAWVTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLI--GLSLDPVT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 92 AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVA 171
Cdd:TIGR03004 82 TGVMVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLA 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 16128778 172 ELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217
Cdd:TIGR03004 162 DLTFAAQSIRNLTLDTLSIFAITLLCYFVMALIIMLIMRVLERVVR 207
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
19-207 |
2.56e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.94 E-value: 2.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 19 AKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFN-DLRIDPFTAAVVTI 97
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGwGILPGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 98 MINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180 190
....*....|....*....|....*....|
gi 16128778 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSF 207
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
33-218 |
4.46e-14 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 67.71 E-value: 4.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 33 GLVIGLLAGFARtfgGWIANHVALVFIEVIRGTPIVVQVMFIYFAlpmAFNDLRIDPFTAAVVTIMINSGAYIAEITRGA 112
Cdd:pfam00528 1 GIPLGIIAALRR---GRRLDRLLRPLIDLLQALPSFVLAILLVVI---AILSILGHGILPAIILALLGWAGYARLIRRAA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 113 VLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI----GVAELTRQGQEIIAGNFrAL 188
Cdd:pfam00528 75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE-IQ 153
|
170 180 190
....*....|....*....|....*....|
gi 16128778 189 EIWSAVAVFYLIITLVLSFILRRLERRMKI 218
Cdd:pfam00528 154 GPVLAAALILLLLNLLVDILQRLLDPRVRK 183
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| glnP |
PRK09494 |
glutamine ABC transporter permease protein; Reviewed |
1-219 |
1.72e-140 |
|
glutamine ABC transporter permease protein; Reviewed
Pssm-ID: 181907 [Multi-domain] Cd Length: 219 Bit Score: 391.34 E-value: 1.72e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 1 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM 80
Cdd:PRK09494 1 MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 81 AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK 160
Cdd:PRK09494 81 AFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIK 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 16128778 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL 219
Cdd:PRK09494 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKIL 219
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
1-218 |
1.05e-82 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 244.98 E-value: 1.05e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 1 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPM 80
Cdd:COG0765 1 MFFDFSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFGLPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 81 AfnDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK 160
Cdd:COG0765 81 L--GIDLSPFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGNEFISLLK 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 16128778 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218
Cdd:COG0765 159 DTSLVSVIGVPELTRAAQQIASRTFRPFEVYLVAALIYLVLTLPLSLLARRLERRLAR 216
|
|
| ArtQ |
COG4215 |
ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; |
13-215 |
7.23e-54 |
|
ABC-type arginine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443361 [Multi-domain] Cd Length: 238 Bit Score: 172.62 E-value: 7.23e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 13 PLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLR------ 86
Cdd:COG4215 16 PALLAGALVTLELALLSLLLGLVLGLLGALAKLSGNRPLRWLATGYTTVVRGVPDLLLILLLYFGGQILLNALAdlfgyd 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 87 ----IDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDT 162
Cdd:COG4215 96 gfieINPFVAGVLALGFVFGAYATEVFRGAFLAVPKGQIEAARAYGMSRWQVFRRILLPQMWRYALPGLGNNWLVLLKDT 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 16128778 163 SLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:COG4215 176 ALVSVIGLVDLVRQAQEAAGSTREPFTFYLAAALIYLALTTVSELVLARLERR 228
|
|
| ArtM |
COG4160 |
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ... |
3-216 |
1.60e-53 |
|
ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443325 [Multi-domain] Cd Length: 229 Bit Score: 171.43 E-value: 1.60e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 3 FDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMaF 82
Cdd:COG4160 1 MDLDLLFEYLPLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWPARGYIYVFRGTPLLVQLFLIYYGLGQ-F 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 83 NDLR--------IDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQ 154
Cdd:COG4160 80 EWVReswlwpllRDPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSALRRALPAYSNE 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16128778 155 WIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216
Cdd:COG4160 160 VILMLKATALASTITVMDLTGVARRIYSRTYDPFEPFLIAALIYLVITFLLTRLFRLLERRL 221
|
|
| PRK15100 |
PRK15100 |
cystine ABC transporter permease; |
13-216 |
3.62e-45 |
|
cystine ABC transporter permease;
Pssm-ID: 185055 [Multi-domain] Cd Length: 220 Bit Score: 149.51 E-value: 3.62e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 13 PLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAfnDLRIDPFTA 92
Cdd:PRK15100 13 PFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYVSIFRGTPLIAQLFMIYYGLPQF--GIELDPIPA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 93 AVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAE 172
Cdd:PRK15100 91 AMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTRWQTLRRAILPQAARTALPPLSNSFISLVKDTSLAATIQVPE 170
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 16128778 173 LTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216
Cdd:PRK15100 171 LFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSALQNRFENQL 214
|
|
| ectoine_ehuC |
TIGR03004 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ... |
12-217 |
4.95e-40 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.
Pssm-ID: 132049 [Multi-domain] Cd Length: 214 Bit Score: 136.52 E-value: 4.95e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 12 IPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAfnDLRIDPFT 91
Cdd:TIGR03004 4 LPLLLQGAWVTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLI--GLSLDPVT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 92 AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVA 171
Cdd:TIGR03004 82 TGVMVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLA 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 16128778 172 ELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMK 217
Cdd:TIGR03004 162 DLTFAAQSIRNLTLDTLSIFAITLLCYFVMALIIMLIMRVLERVVR 207
|
|
| ectoine_ehuD |
TIGR03003 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are ... |
3-216 |
1.94e-39 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons.
Pssm-ID: 132048 [Multi-domain] Cd Length: 212 Bit Score: 134.60 E-value: 1.94e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 3 FDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGL-LAGFARTFGGWIANHVALVfIEVIRGTPIVVQVMFIYFALPMA 81
Cdd:TIGR03003 1 WDWEFVRQILPTLIEGLKITILATALGFAIAAVLGLvFAILRRSAPTPISWPTSFV-VEFIRGTPLLVQLYFLYYVLPDI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 82 fnDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKD 161
Cdd:TIGR03003 80 --GIRLPALVAGVLGLGLHYATYAAEVYRAGIEAVPRGQWEAATALNLTARQTYRHIILPQAIPPIIPALGNYLVAMFKE 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 16128778 162 TSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216
Cdd:TIGR03003 158 TPVLSAITVLELMNQAKSIGNSTFRYLEPMTLVGVFFLILSIISVFFLRRLEARL 212
|
|
| PRK11123 |
PRK11123 |
arginine ABC transporter permease ArtQ; |
15-215 |
4.70e-31 |
|
arginine ABC transporter permease ArtQ;
Pssm-ID: 182979 [Multi-domain] Cd Length: 238 Bit Score: 113.62 E-value: 4.70e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 15 LIEGAKMTLWISVLGLAGGLVIGLLagfartFGGWIANHVALV------FIEVIRGTPIVVQVMFIYF------------ 76
Cdd:PRK11123 7 LASAAGMTVGLAVCALIVGLALAML------FAVWESAKWRPVawpgtaLVTLLRGLPEILVVLFIYFgssqllltlsdg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 77 ----------ALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRR 146
Cdd:PRK11123 81 ftlnlgfvqiPVQMDIENFEVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16128778 147 MLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:PRK11123 161 ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIELR 229
|
|
| HEQRo_perm_3TM |
TIGR01726 |
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This ... |
11-111 |
1.61e-27 |
|
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This model represents one of several classes of multiple membrane spanning regions found immediately N-terminal to the domain described by pfam00528, binding-protein-dependent transport systems inner membrane component. The region covered by this model generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 130787 [Multi-domain] Cd Length: 99 Bit Score: 100.30 E-value: 1.61e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 11 AIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFndLRIDPF 90
Cdd:TIGR01726 1 NLPFLLKGLLLTLLLSVLSILLGLVLGLLLALLRLSGNRPLRWIATVYVELFRGTPLLVQLFFIYFGLPLIG--IRLSPL 78
|
90 100
....*....|....*....|.
gi 16128778 91 TAAVVTIMINSGAYIAEITRG 111
Cdd:TIGR01726 79 TAAVIALTLFYGAYLAEIFRG 99
|
|
| artM |
PRK11122 |
arginine ABC transporter permease ArtM; |
12-215 |
4.19e-25 |
|
arginine ABC transporter permease ArtM;
Pssm-ID: 182978 [Multi-domain] Cd Length: 222 Bit Score: 97.72 E-value: 4.19e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 12 IPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFAlPMAFNDLRIDPFT 91
Cdd:PRK11122 5 LPELLKGLHTSLTLTVASLLVALVLALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYG-PGQFPWLQEYPWL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 92 ---------AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRyVILPLALRRMLPPLGNQWIISIKDT 162
Cdd:PRK11122 84 whllsqpwlCAMLALALNSAAYSTQLFYGAVRAIPEGQWQSCAALGMSKKQTLR-ILLPYAFKRALSSYSNEVVLVFKST 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 16128778 163 SLFIVIGVAELTRQGQEIIAGNFRALeIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:PRK11122 163 SLAYTITLMDVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLLMRLIERK 214
|
|
| PRK15107 |
PRK15107 |
glutamate/aspartate ABC transporter permease GltK; |
2-215 |
1.25e-24 |
|
glutamate/aspartate ABC transporter permease GltK;
Pssm-ID: 185062 [Multi-domain] Cd Length: 224 Bit Score: 96.82 E-value: 1.25e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 2 QFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALP-M 80
Cdd:PRK15107 3 EFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTILAVMRLSSFKPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPgF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 81 AFNDLRIDPFT-----AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQW 155
Cdd:PRK15107 83 LQNVLGLSPKTdirliSAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQG 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 156 IISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:PRK15107 163 IVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKKR 222
|
|
| PRK15069 |
PRK15069 |
histidine ABC transporter permease HisM; |
16-215 |
4.06e-24 |
|
histidine ABC transporter permease HisM;
Pssm-ID: 185029 [Multi-domain] Cd Length: 234 Bit Score: 95.50 E-value: 4.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 16 IEGAKMTLWISVLGLAGGLVIGLLAGFARTFGG-WIANHVALvFIEVIRGTPIVVQVMFIYFALpMAFNDLRIDPFTAA- 93
Cdd:PRK15069 20 FTGLAITLWLLVASVVIGFVLAVPLAIARVSSNkWIRFPVWL-YTYVFRGTPLYVQLLVFYTGM-YSLEIVRGTDLLDAf 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 94 --------VVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLF 165
Cdd:PRK15069 98 frsglnctILAFTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGMSTFKLYRRIILPSALRRALPAYSNEVILMLHATTLA 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 16128778 166 IVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:PRK15069 178 FTATVPDILKIARDINSATYQPFQAFGIAAVLYLIISFVLISLFRRAERR 227
|
|
| PRK15135 |
PRK15135 |
histidine ABC transporter permease HisQ; |
14-215 |
1.47e-21 |
|
histidine ABC transporter permease HisQ;
Pssm-ID: 185089 [Multi-domain] Cd Length: 228 Bit Score: 88.70 E-value: 1.47e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 14 LLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLR------- 86
Cdd:PRK15135 8 VILQGALVTLELALSSVVLAVIIGLIGAGGKLSQNRLLGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNSVTealgvgq 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 87 --IDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSL 164
Cdd:PRK15135 88 idIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKATAL 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 16128778 165 FIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERR 215
Cdd:PRK15135 168 VSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLWLERR 218
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
19-207 |
2.56e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.94 E-value: 2.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 19 AKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFN-DLRIDPFTAAVVTI 97
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGwGILPGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 98 MINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQG 177
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPG 160
|
170 180 190
....*....|....*....|....*....|
gi 16128778 178 QEIIAGNFRALEIWSAVAVFYLIITLVLSF 207
Cdd:cd06261 161 TGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
33-218 |
4.46e-14 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 67.71 E-value: 4.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 33 GLVIGLLAGFARtfgGWIANHVALVFIEVIRGTPIVVQVMFIYFAlpmAFNDLRIDPFTAAVVTIMINSGAYIAEITRGA 112
Cdd:pfam00528 1 GIPLGIIAALRR---GRRLDRLLRPLIDLLQALPSFVLAILLVVI---AILSILGHGILPAIILALLGWAGYARLIRRAA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 113 VLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI----GVAELTRQGQEIIAGNFrAL 188
Cdd:pfam00528 75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE-IQ 153
|
170 180 190
....*....|....*....|....*....|
gi 16128778 189 EIWSAVAVFYLIITLVLSFILRRLERRMKI 218
Cdd:pfam00528 154 GPVLAAALILLLLNLLVDILQRLLDPRVRK 183
|
|
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
22-148 |
8.70e-08 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 51.19 E-value: 8.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 22 TLWISVLGLAGGLVIGLLAG-----FARtfGGWIANhVALVFIEVIRGTPIVVQVMFIY--FALPMAFNdlridpFT--A 92
Cdd:COG0581 46 TLLLVLLATLIAVPLGVLAAiylaeYAR--GGRLAR-LIRFAIDVLAGVPSIVYGLFGYalFVLTLGLG------FSllA 116
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 16128778 93 AVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRML 148
Cdd:COG0581 117 GALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGIL 172
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
4-148 |
8.35e-07 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 48.15 E-value: 8.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 4 DWSAIWPAIPLLIEgakmTLWISVLGLAGGLVIGLLAGF--ARTFGGW-IANHVALVFIEVIRGTP-IVVQVMFIYFALP 79
Cdd:COG3639 42 DWSYLPDLLSALLE----TLAIALLGTLLGAVLALPLAFlaARNLAPNpWVRLLARRLLNVLRAIPeLVWALIFVAAVGL 117
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16128778 80 MAFndlridpftAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRML 148
Cdd:COG3639 118 GPF---------AGVLALAIHTIGFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFL 177
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
13-216 |
1.48e-06 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 47.45 E-value: 1.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 13 PLLIEGAKMTLWISVLGLAGGLVIGLLAGFArtFGGW-IANHVALVFIEVIRGTPIVVQVMFIYFALPMAFndlridpfT 91
Cdd:COG0600 57 GELWEHLLASLLRVLLGFALAALLGVPLGLL--LGLSrLLRRLLDPLLVFLRPIPPLALAPLLILWFGIGE--------A 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 92 AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISikdtslFIVIGVA 171
Cdd:COG0600 127 SKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLA------WIGLVVA 200
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 16128778 172 ELTRQ----GQEII--AGNFRALEIWSAVAVFyLIITLVLSFILRRLERRM 216
Cdd:COG0600 201 ELLGAssglGYLILdaRQLLDTDLVFAAILVI-GLLGLLLDLLLRLLERRL 250
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
90-144 |
5.90e-06 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 45.85 E-value: 5.90e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 16128778 90 FTAAVV-TIMINSgaYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLAL 144
Cdd:COG0573 157 LTAGIVlAIMILP--TITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAAR 210
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
22-145 |
1.78e-05 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 44.53 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 22 TLWISVLGLAGGLVIGLLAG-----FARtfGGWIANHVALVfIEVIRGTPIVVQVMFIY--FALPMAFNDLRIDPFTAAV 94
Cdd:TIGR00974 59 TLLLTLLAIVIAVPLGIGAAiylaeYAN--GSRFTKIIRFA-VDILAGVPSIVVGLFGYgfFVLTYLGGGFSLLAGALAL 135
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 16128778 95 VTIMInsgAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALR 145
Cdd:TIGR00974 136 ALLIL---PVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALP 183
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
35-145 |
5.62e-05 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 43.02 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 35 VIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFndlridpfTAAVV-TIMINSgaYIAEITRGAV 113
Cdd:TIGR02138 105 VVELLAGIPSVVYGFWGLFVLVPFLKPHFQPFLGSNLGLIPLFGGPIL--------TAGIVlAIMILP--TIASISRDAL 174
|
90 100 110
....*....|....*....|....*....|..
gi 16128778 114 LSIHKGFREAGLALGLSRWETIRYVILPLALR 145
Cdd:TIGR02138 175 RAVPRSYKEASYALGATKWETIRRVILPAARS 206
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
13-215 |
6.61e-05 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 43.23 E-value: 6.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 13 PLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVqvmfIYFALPMAFNDLRIDPFTA 92
Cdd:COG1178 334 PSLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIV----LGLGLLLLFNRPLPLLLYG 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 93 AVVTIMINSG----AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168
Cdd:COG1178 410 TLAILVLAYVvrflPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLL 489
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 16128778 169 GVAEL----TRQGQEIIAGNFRALeiwSAVAVFYLIITLVLSFILRRLERR 215
Cdd:COG1178 490 RPPGFetlaVLIYQLASSGRYGEA---AALALLLVLVSLLPVLLLERLLGR 537
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
4-148 |
6.92e-05 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 42.53 E-value: 6.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16128778 4 DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAgfARTFG-GWIANHVALVFIEVIRGTP-IVVQVMFIYFALPMA 81
Cdd:TIGR01097 49 DWSYLPRILKALLETLAMAILGTVLAAVLAVPLALLA--ARNITpSPWLYGLARLLLNFLRAIPeLVWALIFVAAVGLGP 126
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16128778 82 FndlridpftAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRML 148
Cdd:TIGR01097 127 F---------AGVLALAFHTVGFLGKLFAEAIEEVDPGPVEALRATGASKLQVIRYGVLPQVLPQFL 184
|
|
| |
