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Conserved domains on  [gi|16129042|ref|NP_415597|]
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flagellar L-ring protein [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

flagellar basal body L-ring protein FlgH( domain architecture ID 10011336)

flagellar basal body L-ring protein FlgH assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

Gene Ontology:  GO:0003774|GO:0009427|GO:0071973

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
flgH PRK00249
flagellar basal body L-ring protein FlgH;
14-232 1.15e-103

flagellar basal body L-ring protein FlgH;


:

Pssm-ID: 234700  Cd Length: 222  Bit Score: 299.08  E-value: 1.15e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   14 LLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVAN----GSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSAS 89
Cdd:PRK00249   2 LLLLLLAGCASIPRLPLVGGAPAAAPVEAPTPLPNpapnGSIFQAGSLWNYGYQPLFKDRRARNVGDILTVVLQENTSAS 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   90 KSSSANASRDGKTNFGFDTVPRYLQGlfGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQI 169
Cdd:PRK00249  82 KSNSTNRSRDSSTNFGLPSLFGYLNG--LDANASLETSSDNSFKGKGSASRSNTLTGTITVTVTQVLPNGNLVIRGEKEV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  170 AINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
Cdd:PRK00249 160 RVNQGTEFLRVSGVVRPRDISGDNTISSTRIADARISYGGRGYISDAQQPGWLQRFFDSLSPF 222
 
Name Accession Description Interval E-value
flgH PRK00249
flagellar basal body L-ring protein FlgH;
14-232 1.15e-103

flagellar basal body L-ring protein FlgH;


Pssm-ID: 234700  Cd Length: 222  Bit Score: 299.08  E-value: 1.15e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   14 LLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVAN----GSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSAS 89
Cdd:PRK00249   2 LLLLLLAGCASIPRLPLVGGAPAAAPVEAPTPLPNpapnGSIFQAGSLWNYGYQPLFKDRRARNVGDILTVVLQENTSAS 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   90 KSSSANASRDGKTNFGFDTVPRYLQGlfGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQI 169
Cdd:PRK00249  82 KSNSTNRSRDSSTNFGLPSLFGYLNG--LDANASLETSSDNSFKGKGSASRSNTLTGTITVTVTQVLPNGNLVIRGEKEV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  170 AINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
Cdd:PRK00249 160 RVNQGTEFLRVSGVVRPRDISGDNTISSTRIADARISYGGRGYISDAQQPGWLQRFFDSLSPF 222
FlgH COG2063
Flagellar basal body L-ring protein FlgH [Cell motility];
14-230 4.02e-97

Flagellar basal body L-ring protein FlgH [Cell motility];


Pssm-ID: 441666  Cd Length: 218  Bit Score: 282.06  E-value: 4.02e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042  14 LLVLSLTGCAWIPSTPLVQGATSAQPVPGPTP---VANGSIFQSaqpinYGYQPLFEDRRPRNIGDTLTIVLQENVSASK 90
Cdd:COG2063   4 LLALLLAGCASVPPEPVVDDPAYAPVMPAPPPaapPANGSLFQA-----GGSRPLFEDRRARRVGDILTVVIVENTSASK 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042  91 SSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIA 170
Cdd:COG2063  79 SASTSRSRSSSVSLGIPTLFGLPGSLLGGPNLSVSASSSSSFKGKGSASRSNSLTGTITATVVEVLPNGNLVVRGEKEVR 158

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042 171 INQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 230
Cdd:COG2063 159 VNQGLEYIRLSGIVRPEDISPDNTVSSTKIADARIEYGGRGALADAQQPGWLQRFFDSVL 218
FlgH pfam02107
Flagellar L-ring protein;
45-231 8.90e-77

Flagellar L-ring protein;


Pssm-ID: 426604  Cd Length: 175  Bit Score: 228.94  E-value: 8.90e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    45 PVANGSIFQSAQpinygYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGfdtvpryLQGLFGNARADV 124
Cdd:pfam02107   1 APANGSLWQAGS-----ARPLFEDRRARRVGDILTVVIVENTSASKSASTNTSRSSSANAG-------AGLGGLDLSASL 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   125 EASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADAR 204
Cdd:pfam02107  69 GASSSSSFKGKGSTSRSNSLTGTITATVVEVLPNGNLVIEGEKEVRVNQETEYIRLSGIVRPEDISADNTVSSTRIADAR 148

                         170       180
                  ....*....|....*....|....*..
gi 16129042   205 IEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:pfam02107 149 IEYGGRGVLADAQQPGWLTRFFDSIWP 175
 
Name Accession Description Interval E-value
flgH PRK00249
flagellar basal body L-ring protein FlgH;
14-232 1.15e-103

flagellar basal body L-ring protein FlgH;


Pssm-ID: 234700  Cd Length: 222  Bit Score: 299.08  E-value: 1.15e-103
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   14 LLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVAN----GSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSAS 89
Cdd:PRK00249   2 LLLLLLAGCASIPRLPLVGGAPAAAPVEAPTPLPNpapnGSIFQAGSLWNYGYQPLFKDRRARNVGDILTVVLQENTSAS 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   90 KSSSANASRDGKTNFGFDTVPRYLQGlfGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQI 169
Cdd:PRK00249  82 KSNSTNRSRDSSTNFGLPSLFGYLNG--LDANASLETSSDNSFKGKGSASRSNTLTGTITVTVTQVLPNGNLVIRGEKEV 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  170 AINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM 232
Cdd:PRK00249 160 RVNQGTEFLRVSGVVRPRDISGDNTISSTRIADARISYGGRGYISDAQQPGWLQRFFDSLSPF 222
FlgH COG2063
Flagellar basal body L-ring protein FlgH [Cell motility];
14-230 4.02e-97

Flagellar basal body L-ring protein FlgH [Cell motility];


Pssm-ID: 441666  Cd Length: 218  Bit Score: 282.06  E-value: 4.02e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042  14 LLVLSLTGCAWIPSTPLVQGATSAQPVPGPTP---VANGSIFQSaqpinYGYQPLFEDRRPRNIGDTLTIVLQENVSASK 90
Cdd:COG2063   4 LLALLLAGCASVPPEPVVDDPAYAPVMPAPPPaapPANGSLFQA-----GGSRPLFEDRRARRVGDILTVVIVENTSASK 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042  91 SSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIA 170
Cdd:COG2063  79 SASTSRSRSSSVSLGIPTLFGLPGSLLGGPNLSVSASSSSSFKGKGSASRSNSLTGTITATVVEVLPNGNLVVRGEKEVR 158

                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042 171 INQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 230
Cdd:COG2063 159 VNQGLEYIRLSGIVRPEDISPDNTVSSTKIADARIEYGGRGALADAQQPGWLQRFFDSVL 218
flgH PRK12697
flagellar basal body L-ring protein FlgH;
3-231 6.30e-92

flagellar basal body L-ring protein FlgH;


Pssm-ID: 237175  Cd Length: 226  Bit Score: 269.43  E-value: 6.30e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    3 KNAAHT--YAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAqpinYGYQPLFEDRRPRNIGDTLTI 80
Cdd:PRK12697   2 PSPARRarAAACAAAAAALAGCAQIPREPITQQPMTAQPPMPPSMQAPGSIYNPG----YAGRPLFEDQRPRNVGDILTI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   81 VLQENVSASKSSSANASRDGKTNFGfdtVPR--YLQGLFGNARADveASGGNTFNGKGGANASNTFSGTLTVTVDQVLVN 158
Cdd:PRK12697  78 VIAENINATKSSGANTNRQGNTDFD---VPTagFLGGLFNKANLS--AQGANKFAATGGASAANTFNGTITVTVTNVLPN 152

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  159 GNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:PRK12697 153 GNLVVSGEKQMLINQGNEFVRFSGVVNPNTISGANSVYSTQVADARIEYSAKGYINEAETMGWLQRFFLNIAP 225
flgH PRK12700
flagellar basal body L-ring protein; Reviewed
 11-231 5.84e-83

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 139164  Cd Length: 230  Bit Score: 246.89  E-value: 5.84e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   11 ISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVA--NGSIFQsaqPINYGYQPLFEDRRPRNIGDTLTIVLQENVSA 88
Cdd:PRK12700  11 VCAALLALAAGCAMIPPEPVVTGPLTAPPPPPPQPSArpNGSIYQ---PSAYGNYPLFEDRRPRNVGDIVTIVLEEKTNA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   89 SKSSSANASRDGKTNFGFDTVPRYLQGLFgNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQ 168
Cdd:PRK12700  88 AKGVATNTSRDGSATLGVAAAPRFMDGVI-NDKLDTDISGGNTANGTGKSSANNTFTGTITTTVIGVLPNGNLQIAGEKQ 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  169 IAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:PRK12700 167 IAINRGSEYVRFSGVVDPRSITGSNTVSSTRVADARIEYRSKGVMDEVQTMGWLQRFFLIASP 229
FlgH pfam02107
Flagellar L-ring protein;
45-231 8.90e-77

Flagellar L-ring protein;


Pssm-ID: 426604  Cd Length: 175  Bit Score: 228.94  E-value: 8.90e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    45 PVANGSIFQSAQpinygYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGfdtvpryLQGLFGNARADV 124
Cdd:pfam02107   1 APANGSLWQAGS-----ARPLFEDRRARRVGDILTVVIVENTSASKSASTNTSRSSSANAG-------AGLGGLDLSASL 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   125 EASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADAR 204
Cdd:pfam02107  69 GASSSSSFKGKGSTSRSNSLTGTITATVVEVLPNGNLVIEGEKEVRVNQETEYIRLSGIVRPEDISADNTVSSTRIADAR 148

                         170       180
                  ....*....|....*....|....*..
gi 16129042   205 IEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:pfam02107 149 IEYGGRGVLADAQQPGWLTRFFDSIWP 175
flgH PRK12699
flagellar basal body L-ring protein; Reviewed
 2-231 4.94e-70

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 105864  Cd Length: 246  Bit Score: 214.42  E-value: 4.94e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    2 QKNAAHTYAISSLLVLSL-TGCAWIPSTPLVQGATSAQP----VPGPTPvANGSIFQSAQPINYG--YQPLFEDRRPRNI 74
Cdd:PRK12699  12 ARRRGRLLGPVLIVMLALvGGCSLPTPAPKVQQPMSARPpdlpLIPPSQ-GNGGIYQAAFDYQGRgrYHPLFEDRRARQI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   75 GDTLTIVLQENVSASKSSSANASRDGKTNFGfdtVPRYLQGLFGN--ARADVEASGGNTFNGKGGANASNTFSGTLTVTV 152
Cdd:PRK12699  91 GDTIIVLLNEKTNASKKSGSNAQRNGDISLS---VPSFLGLPFKSifQDLDLEASSSNKFDGKGESSSNNNFTGTITVTV 167

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16129042  153 DQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISgSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:PRK12699 168 VDILPNGNLLVSGEKQIGINQGHEFIRLSGVINPINVI-NNTVSSIQVADARIEYRGNGYLDEAQTMGWLSRFFLSISP 245
flgH PRK12698
flagellar basal body L-ring protein FlgH;
11-227 4.39e-46

flagellar basal body L-ring protein FlgH;


Pssm-ID: 183690  Cd Length: 224  Bit Score: 152.57  E-value: 4.39e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   11 ISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTP---VANGSIFQSAQPINygyqpLFEDRRPRNIGDTLTIVLQENVS 87
Cdd:PRK12698   5 ILLALALLLSGCSSTPEKPIADDPYYAPVYPEAPPtkiAATGSIFQDSQANS-----LYSDIKAHKVGDIITVVLKESTQ 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   88 ASKSSSANASRDGKTNFGfdtvPRYLQGL---FGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVV 164
Cdd:PRK12698  80 AKKSANNEIKKGSDLSLD----PIYAGGGnvsIGGVPLDLGYKDSMNTKRESDADQSNSLSGSISANVMQVLPNGNLVIR 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16129042  165 GEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFL 227
Cdd:PRK12698 156 GEKWISINNGDEFIRLTGIVRSQDITPDNTIDSTRVANARIQYSGTGTFADAQKVGWLSQFFM 218
flgH PRK12407
flagellar basal body L-ring protein FlgH;
9-226 4.60e-39

flagellar basal body L-ring protein FlgH;


Pssm-ID: 183507  Cd Length: 221  Bit Score: 134.60  E-value: 4.60e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    9 YAISSLLVLSLTGCAwiPSTPLVQ--GATSAQP---VPGPTPVANGSIFQSaqpiNYGYQpLFEDRRPRNIGDTLTIVLQ 83
Cdd:PRK12407   4 FLILTALLLALCGCE--SPALLVQkdDAEFAPPanlIQPATVTEGGGLFQP----GYNWS-LLQDRRAYRVGDILTVILD 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   84 ENVSASksssanasRDGKTNFG-FDTVPRYLQGLFGNARADVEAS--GGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN 160
Cdd:PRK12407  77 ESTQSS--------KQAKTNFGkKNDVSLGVPEVLGKKLDKLGGSisGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGV 148

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16129042  161 LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFF 226
Cdd:PRK12407 149 LVIRGEKWLTLNQGDEYMRVTGLVRADDIARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFF 214
flgH PRK12696
flagellar basal body L-ring protein; Reviewed
 7-231 8.76e-33

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 237174  Cd Length: 236  Bit Score: 118.70  E-value: 8.76e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042    7 HTYAISSLLVLSLTGC-----AWIPSTPLVQGATSAQPvpgPTPVAN-GSIFQSAQPinygyQPLFEDRRPRNIGDTLTI 80
Cdd:PRK12696   3 KRLLATSLAVLLLAGCsaarqQPSPAPPVTPPPAYVEP---EEPADNpGSLFSDSEA-----DLLFADSRARRVGDIVLV 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   81 VLQENVSASKSSSANASRDGKTN------FGFDTVPRYL-QGLFGNARAD---VEASGGNTFNGKGGANASNTFSGTLTV 150
Cdd:PRK12696  75 KIVENSKAKNKADTTADKKSTNEygvsafFGQDSVAINPfNPLMGGGVGTdplLKTSSTSKFSGTGETKRESTVTATIAA 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042  151 TVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLS 230
Cdd:PRK12696 155 RVVRVLPGGLMQVEGARETRVNDETQYIVVSGLVRPRDIGPDNSVMSTQLADARIEYYGKGVLADKQRPGWFTRLMDNVW 234


                 .
gi 16129042  231 P 231
Cdd:PRK12696 235 P 235
flgH PRK12701
flagellar basal body L-ring protein; Reviewed
 10-226 3.71e-31

flagellar basal body L-ring protein; Reviewed


Pssm-ID: 183691  Cd Length: 230  Bit Score: 114.49  E-value: 3.71e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   10 AISSLLVLSLTGCAWI--PS---TPLVQGATSAQPVPGPTPVANGSIFQSAQPInygyqPLFEDRRPRNIGDTLTIVLQE 84
Cdd:PRK12701   7 AVSCLATALLFGCEALhpPApgdNPDYAPTYPVTPDPKELRKVSGAIYSSETAL-----PLFETPRARHPGDILTVYLIE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   85 NVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVV 164
Cdd:PRK12701  82 KTDAQKNATTTQRKNDTTKITNKLFLGRPISLGSGYSMDFDLDNQRQFNGEGRSIQNNKLAGSISVTVAKVLANGNMVVQ 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16129042  165 GEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFF 226
Cdd:PRK12701 162 GEKWVRINQGNEFVRLSGIVRPQDIKADNTITSDRIANARISYGGTGQINNTNAQGWLSRIL 223
flgH PRK12788
flagellar basal body L-ring protein FlgH;
11-231 1.35e-22

flagellar basal body L-ring protein FlgH;


Pssm-ID: 237202  Cd Length: 234  Bit Score: 91.91  E-value: 1.35e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   11 ISSLLVLSLTGCAWIPS--------TPLVQG-ATSAQPVP----GPTPVANGSIFQSAQPinygyqpLFEDRRPRNIGDT 77
Cdd:PRK12788   8 VAILACLALAGCANNLAdalqaprmSPIGQGlRADARAIPveprMRTPVSRRSLWDERTD-------LYRDPRASRTGDL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129042   78 LTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLqGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLV 157
Cdd:PRK12788  81 LTVTISMNDKATLDNKTDRSRDSQTKFGLDYLAEFL-PWSDKGKLTANVSSQTSTKGTGKIDRTEEVKFSVAAIVVDVLP 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16129042  158 NGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSP 231
Cdd:PRK12788 160 NGNLLISGSQEVRVNYEMRVLNVGGIVRPLDITRNNTIAYEKVAEARISYGGRGRLMEVQQPAWGHQVYDQVVP 233
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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