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Conserved domains on  [gi|16129891|ref|NP_416454|]
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flagellar protein FliL [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

flagellar basal body-associated protein FliL( domain architecture ID 10012864)

flagellar basal body-associated protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-154 3.11e-83

flagellar basal body-associated protein FliL; Reviewed


:

Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 241.73  E-value: 3.11e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    1 MTDYAI---SKKSKRSLWIPILVFITLAACASAGYSYWHSHQVA-ADDKAQQRVVPSPVFYALDTFTVNL---GDADRVL 73
Cdd:PRK07021   2 MSDSAIppaKSGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQAtAAAKAAPAPPPAPVFFPLETFTVNLqpdDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   74 YIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFIL 153
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 16129891  154 R 154
Cdd:PRK07021 162 Q 162
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-154 3.11e-83

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 241.73  E-value: 3.11e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    1 MTDYAI---SKKSKRSLWIPILVFITLAACASAGYSYWHSHQVA-ADDKAQQRVVPSPVFYALDTFTVNL---GDADRVL 73
Cdd:PRK07021   2 MSDSAIppaKSGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQAtAAAKAAPAPPPAPVFFPLETFTVNLqpdDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   74 YIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFIL 153
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 16129891  154 R 154
Cdd:PRK07021 162 Q 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-154 4.22e-37

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 124.30  E-value: 4.22e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   1 MTDYAisKKSKRSLWIPILVFITLAACASAGYSYW--HSHQVAADDKAQQRVVPSPVFYALDTFTVNLGD--ADRVLYIG 76
Cdd:COG1580   1 MAEAK--KGGKKKLILIILALVVLLLAAGGGAYFLlgSGAAAEAAEAAAAEPKPPPVYVPLDPFTVNLADggRDRYLKVG 78

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16129891  77 ITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLvagQPKQDVTDVLYTAFILR 154
Cdd:COG1580  79 ITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVVQ 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 57-153 6.45e-20

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 78.86  E-value: 6.45e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    57 YAL-DTFTVNLGDAD--RVLYIGITLRLKDEATRSRLseyLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTP 133
Cdd:pfam03748   1 VALePPFTVNLADGDgdRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKV 77

                          90       100
                  ....*....|....*....|
gi 16129891   134 LVAGQPKQDVTDVLYTAFIL 153
Cdd:pfam03748  78 LGEKLGKGPVEDVLFTEFVV 97
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-154 3.11e-83

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 241.73  E-value: 3.11e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    1 MTDYAI---SKKSKRSLWIPILVFITLAACASAGYSYWHSHQVA-ADDKAQQRVVPSPVFYALDTFTVNL---GDADRVL 73
Cdd:PRK07021   2 MSDSAIppaKSGKKRKLWLIILILLLLAAAAGAGYSWWLSKEQAtAAAKAAPAPPPAPVFFPLETFTVNLqpdDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   74 YIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFIL 153
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 16129891  154 R 154
Cdd:PRK07021 162 Q 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-154 4.22e-37

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 124.30  E-value: 4.22e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   1 MTDYAisKKSKRSLWIPILVFITLAACASAGYSYW--HSHQVAADDKAQQRVVPSPVFYALDTFTVNLGD--ADRVLYIG 76
Cdd:COG1580   1 MAEAK--KGGKKKLILIILALVVLLLAAGGGAYFLlgSGAAAEAAEAAAAEPKPPPVYVPLDPFTVNLADggRDRYLKVG 78

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16129891  77 ITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLvagQPKQDVTDVLYTAFILR 154
Cdd:COG1580  79 ITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVVQ 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 57-153 6.45e-20

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 78.86  E-value: 6.45e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    57 YAL-DTFTVNLGDAD--RVLYIGITLRLKDEATRSRLseyLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTP 133
Cdd:pfam03748   1 VALePPFTVNLADGDgdRYLKVSIALEVDDEEALEKR---MPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKV 77

                          90       100
                  ....*....|....*....|
gi 16129891   134 LVAGQPKQDVTDVLYTAFIL 153
Cdd:pfam03748  78 LGEKLGKGPVEDVLFTEFVV 97
fliL PRK05696
flagellar basal body-associated protein FliL; Reviewed
 9-153 8.36e-11

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 180207  Cd Length: 170  Bit Score: 56.89  E-value: 8.36e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    9 KSKRSLWIPILVFITLAACASAGYsyW---HSHQVAADDKA-----QQRVVPSPVFYA--LDTFTVNL-GDA-DRVLYIG 76
Cdd:PRK05696  15 KSKKKLIIIIVIGVLLALGGGGAA--WffmGSSDKAAAAAAeaaaeAAAAVKGPALYVpmPRPFVFNVpGNGrDRLVQIK 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   77 ITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNL----IAEIKTTLsTPLVAgqpKQDVTDVLYTAFI 152
Cdd:PRK05696  93 VQLMVRGSDDEELAKKHIPLIESALLMTFSSATVDQLSTPAGKEELrqkaLASVQETL-QKVTG---KPVVEKVLFTGFV 168


                 .
gi 16129891  153 L 153
Cdd:PRK05696 169 M 169
fliL PRK08455
flagellar basal body-associated protein FliL; Reviewed
 57-152 3.51e-05

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 181433 [Multi-domain]  Cd Length: 182  Bit Score: 41.60  E-value: 3.51e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   57 YALDTFTVNL--GDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPL 134
Cdd:PRK08455  87 YPLDPFTVNLlsQSGRRYLKTSISLELSNEKLKPELDKKDPVIRDIIIRILSSKTVEEVSTNKGKERLKDEIVGKLNEFL 166

                         90
                 ....*....|....*...
gi 16129891  135 VAGQPKqdvtDVLYTAFI 152
Cdd:PRK08455 167 IDGFIK----NVFFTDFV 180
fliL PRK12785
flagellar basal body-associated protein FliL; Reviewed
 8-97 2.05e-03

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 183743 [Multi-domain]  Cd Length: 166  Bit Score: 36.57  E-value: 2.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891    8 KKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALDTFTVNL----GDADRVLYIGITLRLKD 83
Cdd:PRK12785  20 PKKKKKLIIIAAAAVLLLGGGGGGFFFFFSHGHGEHHAEAAEPKKPPVFVDVPDMLVNLagdpGERVQYLKLKVVLEVKD 99

                         90
                 ....*....|....
gi 16129891   84 EATRSRLSEYLPEV 97
Cdd:PRK12785 100 EKVVEQIKPLMPRV 113
PRK05697 PRK05697
flagellar basal body-associated protein FliL-like protein; Validated
 41-152 9.68e-03

flagellar basal body-associated protein FliL-like protein; Validated


Pssm-ID: 235565  Cd Length: 137  Bit Score: 34.51  E-value: 9.68e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129891   41 AADDKAQQRVVPSPVFYALD-TFTVN-LGDADRVLY--IGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATE 116
Cdd:PRK05697  20 AAAEAEEAPEAPKYAYYGLEpDIVTNyISDGKKLGYvkIDVELMVKDPDDLAAVEHHDPLIRNALVELLGQQTEDKVKSL 99

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 16129891  117 EGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFI 152
Cdd:PRK05697 100 TGREEIRQECLKQVNELLEQETGKPLVVDLLFTKYI 135
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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