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Conserved domains on  [gi|16130251|ref|NP_416819|]
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acetyl-CoA carboxyltransferase subunit beta [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

acetyl-CoA carboxylase carboxyltransferase subunit beta( domain architecture ID 10002494)

acetyl-CoA carboxylase carboxyltransferase subunit beta (AccD) is a component of the acetyl coenzyme A carboxylase (ACC) complex that catalyzes the carboxylation of acetyl-CoA to form malonyl-CoA

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
1-279 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


:

Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 575.09  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   1 MSWIERIKSNITPT-RKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEP 79
Cdd:COG0777   1 MSWFKKLKPKIKTTsKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLVP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  80 KDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICF 159
Cdd:COG0777  81 VDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLIIF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251 160 SASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVRE 239
Cdd:COG0777 161 SASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIRE 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 16130251 240 KLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMN 279
Cdd:COG0777 241 KLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
 
Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
1-279 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 575.09  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   1 MSWIERIKSNITPT-RKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEP 79
Cdd:COG0777   1 MSWFKKLKPKIKTTsKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLVP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  80 KDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICF 159
Cdd:COG0777  81 VDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLIIF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251 160 SASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVRE 239
Cdd:COG0777 161 SASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIRE 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 16130251 240 KLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMN 279
Cdd:COG0777 241 KLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
accD TIGR00515
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase ...
1-283 0e+00

acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 129606 [Multi-domain]  Cd Length: 285  Bit Score: 531.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251     1 MSWIERIKSN--ITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELE 78
Cdd:TIGR00515   1 MSWIDRFKSKkkITSTRKAEVPEGVWTKCPKCGQVLYTKELERNLEVCPKCDHHMRMDARERIESLLDEGSFEEFNSHLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    79 PKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLIC 158
Cdd:TIGR00515  81 PKDPLKFKDSKKYKDRIAKAQKETGEKDAVVTGKGTLYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALEDNCPLII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   159 FSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVR 238
Cdd:TIGR00515 161 FSASGGARMQEALLSLMQMAKTSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVR 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 16130251   239 EKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAP 283
Cdd:TIGR00515 241 EKLPEGFQTSEFLLEHGAIDMIVHRPEMKKTLASLLAKLQNLPSP 285
accD CHL00174
acetyl-CoA carboxylase beta subunit; Reviewed
6-274 1.39e-107

acetyl-CoA carboxylase beta subunit; Reviewed


Pssm-ID: 214384 [Multi-domain]  Cd Length: 296  Bit Score: 314.53  E-value: 1.39e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    6 RIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKF 85
Cdd:CHL00174  20 SYMYDTKYSWNTQKYKHLWVQCENCYGLNYKKFLKSKMNICEQCGYHLKMSSSDRIELLIDPGTWNPMDEDMVSLDPIEF 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   86 -RDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGG 164
Cdd:CHL00174 100 hSDEEPYKDRIDSYQKKTGLTDAVQTGIGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNESLPLIIVCASGG 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  165 ARMQEALMSLMQMAKTSAALAKMQ-ERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPP 243
Cdd:CHL00174 180 ARMQEGSLSLMQMAKISSALYDYQsNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPE 259
                        250       260       270
                 ....*....|....*....|....*....|.
gi 16130251  244 GFQRSEFLIEKGAIDMIVRRPEMRLKLASIL 274
Cdd:CHL00174 260 GSQAAEYLFDKGLFDLIVPRNLLKGVLSELF 290
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
54-234 8.45e-21

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 91.94  E-value: 8.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    54 RMTARNRLHSLLDEGSLVELGSELEPKdVLKFRDSKKYKDRLAsaqkeTGEkdalvvmkGTLYGMPVVAAAFEFAFMGGS 133
Cdd:pfam01039   7 KLTARERIDLLLDPGSFGELEDLFFHR-ATEFGRKRIPRDGVV-----TGS--------GAVIGRAVEVVAQDFTVFGGS 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   134 MGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQErGLPYISVLTDPTMGGVSASFAmL 213
Cdd:pfam01039  73 LGPAKGEKILRAMEIAIKTGLPLIGINDSGGARIQEGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPA-L 150
                         170       180
                  ....*....|....*....|..
gi 16130251   214 GDLNIA-EPKALIGFAGPRVIE 234
Cdd:pfam01039 151 GDFVIMvEGTSPMFLTGPPVIK 172
 
Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
1-279 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 575.09  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   1 MSWIERIKSNITPT-RKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEP 79
Cdd:COG0777   1 MSWFKKLKPKIKTTsKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLVP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  80 KDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICF 159
Cdd:COG0777  81 VDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLIIF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251 160 SASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVRE 239
Cdd:COG0777 161 SASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIRE 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 16130251 240 KLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMN 279
Cdd:COG0777 241 KLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
accD TIGR00515
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase ...
1-283 0e+00

acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 129606 [Multi-domain]  Cd Length: 285  Bit Score: 531.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251     1 MSWIERIKSN--ITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELE 78
Cdd:TIGR00515   1 MSWIDRFKSKkkITSTRKAEVPEGVWTKCPKCGQVLYTKELERNLEVCPKCDHHMRMDARERIESLLDEGSFEEFNSHLE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    79 PKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLIC 158
Cdd:TIGR00515  81 PKDPLKFKDSKKYKDRIAKAQKETGEKDAVVTGKGTLYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALEDNCPLII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   159 FSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVR 238
Cdd:TIGR00515 161 FSASGGARMQEALLSLMQMAKTSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVR 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 16130251   239 EKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAP 283
Cdd:TIGR00515 241 EKLPEGFQTSEFLLEHGAIDMIVHRPEMKKTLASLLAKLQNLPSP 285
accD CHL00174
acetyl-CoA carboxylase beta subunit; Reviewed
6-274 1.39e-107

acetyl-CoA carboxylase beta subunit; Reviewed


Pssm-ID: 214384 [Multi-domain]  Cd Length: 296  Bit Score: 314.53  E-value: 1.39e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    6 RIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKF 85
Cdd:CHL00174  20 SYMYDTKYSWNTQKYKHLWVQCENCYGLNYKKFLKSKMNICEQCGYHLKMSSSDRIELLIDPGTWNPMDEDMVSLDPIEF 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   86 -RDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGG 164
Cdd:CHL00174 100 hSDEEPYKDRIDSYQKKTGLTDAVQTGIGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNESLPLIIVCASGG 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  165 ARMQEALMSLMQMAKTSAALAKMQ-ERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPP 243
Cdd:CHL00174 180 ARMQEGSLSLMQMAKISSALYDYQsNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPE 259
                        250       260       270
                 ....*....|....*....|....*....|.
gi 16130251  244 GFQRSEFLIEKGAIDMIVRRPEMRLKLASIL 274
Cdd:CHL00174 260 GSQAAEYLFDKGLFDLIVPRNLLKGVLSELF 290
PRK07189 PRK07189
malonate decarboxylase subunit beta; Reviewed
55-235 1.04e-22

malonate decarboxylase subunit beta; Reviewed


Pssm-ID: 235954  Cd Length: 301  Bit Score: 95.35  E-value: 1.04e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   55 MTARNRLHSLLDEGSLVELgseLEPKDvlkfrdskkykdRLAS----AQKETGE-KDALVVMKGTLYGMPVVAAAFEFAF 129
Cdd:PRK07189  15 ASARERAAALLDAGSFREL---LGPFE------------RVMSphlpLQGIPPQfDDGVVVGKGTLDGRPVVVAAQEGRF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  130 MGGSMGSVVGARFVRAVEQALEDN------CPLICFSaSGGARMQEALMSLMQMAKTSAALAKMQeRGLPYISVLTDPT- 202
Cdd:PRK07189  80 MGGSVGEVHGAKLAGALELAAEDNrngiptAVLLLFE-TGGVRLQEANAGLAAIAEIMRAIVDLR-AAVPVIGLIGGRVg 157
                        170       180       190
                 ....*....|....*....|....*....|....
gi 16130251  203 -MGGVSASfAMLGDLNIAEPKALIGFAGPRVIEQ 235
Cdd:PRK07189 158 cFGGMGIA-AALCSYLIVSEEGRLGLSGPEVIEQ 190
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
54-234 8.45e-21

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 91.94  E-value: 8.45e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251    54 RMTARNRLHSLLDEGSLVELGSELEPKdVLKFRDSKKYKDRLAsaqkeTGEkdalvvmkGTLYGMPVVAAAFEFAFMGGS 133
Cdd:pfam01039   7 KLTARERIDLLLDPGSFGELEDLFFHR-ATEFGRKRIPRDGVV-----TGS--------GAVIGRAVEVVAQDFTVFGGS 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   134 MGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQErGLPYISVLTDPTMGGVSASFAmL 213
Cdd:pfam01039  73 LGPAKGEKILRAMEIAIKTGLPLIGINDSGGARIQEGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPA-L 150
                         170       180
                  ....*....|....*....|..
gi 16130251   214 GDLNIA-EPKALIGFAGPRVIE 234
Cdd:pfam01039 151 GDFVIMvEGTSPMFLTGPPVIK 172
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
51-301 1.51e-18

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 85.46  E-value: 1.51e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  51 HHMR--MTARNRLHSLLDEGSLVELGselepkdvlkfrdskkykdRLA-SAQKETGEK---DALVVMKGTLYGMPVVAAA 124
Cdd:COG4799  28 QHARgkLTARERIDLLLDPGSFLELG-------------------ALAgHRMYDDDDRvpgDGVVTGIGTVDGRPVVVVA 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251 125 FEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQeRGLPYISVLTDPTMG 204
Cdd:COG4799  89 NDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESFAGYGRIFYRNARSS-GGIPQISVIMGPCAA 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251 205 GVSASFAMlGDLNIA-EPKALIGFAGPRVIEQTVREKL---PPG-----FQRS---EFLI--EKGAIDmIVRRpemrlkl 270
Cdd:COG4799 168 GGAYSPAL-SDFVIMvKGTSQMFLGGPPVVKAATGEEVtaeELGgadvhARVSgvaDYLAedEEEALA-LARR------- 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 16130251 271 asILAklmNLPAPNPEAPREGVVVPPVPDQE 301
Cdd:COG4799 239 --LLS---YLPSNNLEDPPRAEPAPPARDPE 264
zf-ACC pfam17848
Acetyl-coA carboxylase zinc finger domain; Acetyl-coA carboxylase (ACC) is a central metabolic ...
24-49 6.72e-13

Acetyl-coA carboxylase zinc finger domain; Acetyl-coA carboxylase (ACC) is a central metabolic enzyme that catalyzes the committed step in fatty acid biosynthesis: biotin- dependent conversion of acetyl-coA to malonyl-coA. In bacteria this protein contains a small zinc finger domain.


Pssm-ID: 436090 [Multi-domain]  Cd Length: 26  Bit Score: 61.47  E-value: 6.72e-13
                          10        20
                  ....*....|....*....|....*.
gi 16130251    24 WTKCDSCGQVLYRAELERNLEVCPKC 49
Cdd:pfam17848   1 WIKCPSCGEILYRKDLERNLSVCPKC 26
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
58-230 3.49e-04

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 42.10  E-value: 3.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251   58 RNRLHSLLDEGS-LVELgSELEPKDVlkfrdskkYKDRLASAQKETGekdalvvmKGTLYGMPVVAAAFEFAFMGGSMGS 136
Cdd:PLN02820  85 RERIDRLLDPGSpFLEL-SQLAGHEL--------YGEDLPSGGIVTG--------IGPVHGRLCMFVANDPTVKGGTYYP 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130251  137 VVGARFVRAVEQALEDNCPLICFSASGGA---RMQEALMSLMQMAKTSAALAKMQERGLPYIS-VLTDPTMGGVSASfAM 212
Cdd:PLN02820 148 ITVKKHLRAQEIAAQCRLPCIYLVDSGGAnlpRQAEVFPDRDHFGRIFYNQARMSSAGIPQIAlVLGSCTAGGAYVP-AM 226
                        170
                 ....*....|....*...
gi 16130251  213 LGDLNIAEPKALIGFAGP 230
Cdd:PLN02820 227 ADESVIVKGNGTIFLAGP 244
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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