|
Name |
Accession |
Description |
Interval |
E-value |
| HycE2 |
COG3261 |
Ni,Fe-hydrogenase III large subunit [Energy production and conversion]; |
58-523 |
0e+00 |
|
Ni,Fe-hydrogenase III large subunit [Energy production and conversion];
Pssm-ID: 442492 [Multi-domain] Cd Length: 479 Bit Score: 561.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 58 GWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRR 137
Cdd:COG3261 1 LALAALALLLALDLAAGGALFGLRLEAEDELLLLLLLAAGVLLLLPTPPPSSSAPAAAAARRERARERLGGEEGGGPPRR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 138 LVLPDDWPEDMHPLRKDAMDYRLRPEPTTDseTYPFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFY 217
Cdd:COG3261 81 RLLLPDGWPPLPPPPLRPPPPPRGPPPPPP--EEPEMKVEGEGVHEIPVGPVHAGLIEPGHFRFSVEGERILDLEIRLGY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 218 VHRGMEKLAETRmGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFV 297
Cdd:COG3261 159 VHRGIEKLAEGR-DYEQALYLAERICGICSVAHALAYCQAVEKAAGIEVPPRAQYLRVILLELERIHSHLLDLGALANDV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 298 GFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQG 377
Cdd:COG3261 238 GFETLFMQCWRLRERVLDLNEALTGNRVLRGINVPGGVRRDLDPEQLKAILERLDELEEEVKELVDLFLNDPSVLDRLVG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 378 IGILDRQIAR----------------DLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDT 441
Cdd:COG3261 318 TGVLSKEDARdlgavgpvarasgvdrDVRRDHPYAAYDELDFKVVTETEGDVYARALVRLEEIFESLDLIRQALEKLPEG 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 442 PLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCT 521
Cdd:COG3261 398 PIRVPVPGLPPDGEGLGRVEAPRGELVHYVRTDGDGRLERVKIRTPSFANWPALELALRGNIVADFPLINKSFDPCYSCT 477
|
..
gi 16130412 522 DR 523
Cdd:COG3261 478 DR 479
|
|
| HycE1 |
COG3262 |
Ni,Fe-hydrogenase III component G [Energy production and conversion]; |
13-520 |
1.13e-139 |
|
Ni,Fe-hydrogenase III component G [Energy production and conversion];
Pssm-ID: 442493 [Multi-domain] Cd Length: 523 Bit Score: 414.35 E-value: 1.13e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 13 ILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGaEKCWIV 92
Cdd:COG3262 3 RPEELRARFGGSILERRWVRPNEVWVEVDREDLPELAEFLAEGGGGRLAALWGNDERELGGGFAVYYVFALEG-EGALVT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 93 VKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRlRPEPTTDSETYP 172
Cdd:COG3262 82 LKVSVPKDDPVFPSITDLFPAASWYEREIRDLFGIVPEGHPDPRRLVLHDDWPEGIYPLRKDFKGGP-RPAPAPAEEYFR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 173 FINEGNSdARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSV 252
Cdd:COG3262 161 PVEGEGI-EVVVVGPVHAGIIEPGHFFFSVGGEIVIRLEELLYYVHKGEEKLEEGEEGRAGLVLAEAAGGDSGAAAAAAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 253 AYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLI 332
Cdd:COG3262 240 AAAAEAAAAAAIPPRAALLRLLRLLLERLELHLGLLGLGGLDAGGAGAAGAAALLRRRLERLLEALLLRRGRRGGGGGGG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 333 GGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIA----------------RDLRFDHPYA 396
Cdd:COG3262 320 GGRDDDDLLADLILELLLDLEEEEEELEELADLLSRLIDRLDTTGGLALKAAAAggvggaagrasggrgdRRRRAPYAAY 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 397 DYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDN 476
Cdd:COG3262 400 DDVDLRVVVLTVGDVDVRRARVREELEEISRLIIILLDLLLLGPGGLLVGGEPAPAEGGGGGGGLRGGGGEGVRGGGGDA 479
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 16130412 477 QKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSC 520
Cdd:COG3262 480 IRRRRWRRPSAANWPNPPALILPNINDDFPLNNSINSLSYGSSD 523
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
183-523 |
2.51e-78 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 251.53 E-value: 2.51e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 183 VIPVGPLHitsdeP---GHFRLFV--DGEQIVDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSVAYTNS 257
Cdd:COG0649 8 VLNMGPQH-----PsthGVLRLVLelDGETVVDADPHIGYLHRGFEKLAENRT-YTQIIPYTDRLDYLSPMNNELAYVLA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 258 VENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRR 337
Cdd:COG0649 82 VEKLLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 338 DILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLRFDHPYADYGN- 400
Cdd:COG0649 162 DLPDGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEdaialgvtgpvlrasgVDYDLRKDEPYSGYDEl 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 401 ---IPktlfTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKP--------------HAFAL---GF- 459
Cdd:COG0649 242 dfdVP----VGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPppkeemktsmealiHHFKLvteGFk 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 460 ---------VEAPRGE-------DvhwsmlGDNqKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:COG0649 318 vpagevyaaVESPRGElgfylvsD------GGT-KPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
183-523 |
8.02e-67 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 221.57 E-value: 8.02e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 183 VIPVGPLHITSDepGHFRLFV--DGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSVAYTNSVEN 260
Cdd:PRK06075 8 TLNFGPQHPAAH--GVLRLILelDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYF-DRLDYVSPMNNEHAYCLAVEK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 261 ALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDIL 340
Cdd:PRK06075 85 LLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGGVRRDLP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 341 KEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLRFDHPYADYGN---- 400
Cdd:PRK06075 165 DGLLEDIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKEralalgftgpmlrasgVAWDLRKSQPYEVYDEldfd 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 401 IPktlfTFTGGDVFSRVMVRVKETFDSLAMLEFALDNM--PDTPLLTEGFSYKP--------------HAFAL---GF-- 459
Cdd:PRK06075 245 VP----VGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLrpPPGPVMVDDPKIAPparlemktsmealiHHFKLvteGFrv 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130412 460 --------VEAPRGE-DVHwsMLGD-NQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:PRK06075 321 pagevyaaVESPKGEfGVY--LVSDgGNKPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
11-523 |
2.14e-62 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 218.88 E-value: 2.14e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 11 EAILAALKTQFPGAVLdEERQTPEQVTITVKINLLPDVVQYLYYQHDG---WLPVLFGNDE---RTLNGHY---AVYYAL 81
Cdd:PRK13292 222 FGLAGELEGAFGDDVR-LDEGATDMLTYRCPPELVPEVLRHLKKRASSpfrRLEDLAAVDEscrRDREKFPdftVNYHLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 82 SMEGAEKcwIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWpeDMHPLRKD----AMD 157
Cdd:PRK13292 301 SFDTPGH--VRIKTELRGRTPELPSATGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDW--EGHPLRKEhpfrATE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 158 Y---------RLRPEPTTDsetypFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAEt 228
Cdd:PRK13292 377 MppytrddarRLQPLPAGD-----FFDRVDEETLILNLGPQHPGTHGIIRFVLKLDGEEIVDMDSDIGYHHRGAEKIGE- 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 229 RMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFR 308
Cdd:PRK13292 451 RQHWNQFIPYTDRIDYLAGVQNNLAYVNSVETLCGIEVPDRAIYIRVMLSELFRIANHLVWLGTFAADVGAMTPVFYTFT 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 309 VREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ---- 384
Cdd:PRK13292 531 DREKIFDIVEMITGGRMHPAWFRIGGVAEDLPEGWKEAVEAFLRWFPGRLKEYEDLLTGNPIFKARLKGVGVITRDeave 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 385 ------------IARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSY-- 450
Cdd:PRK13292 611 wgisgpnlracgLAWDLRKKMPYGGYDRFDFEVPTAEGGDCYARYLVRMEEMRQSLRIVRQAAAGMPGGRWISDDYRYvl 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 451 -------------------------KPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVS 505
Cdd:PRK13292 691 pqkrdtlkdieslihhfvnvtrgpaPPKGECYAAIEAPKGENGYFVVSDGLNIAYRMRIRTPSFPHIQALPLLSRGWLVA 770
|
570
....*....|....*...
gi 16130412 506 DAPLIIGSLDPCYSCTDR 523
Cdd:PRK13292 771 DFLAIIGSIDFVLADLDR 788
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
183-523 |
7.95e-60 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 202.96 E-value: 7.95e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 183 VIPVGPLHITSDepGHFRLFV--DGEQIVDADYRLFYVHRGMEKLAEtRMGYNEVTFLSDRVCGICGFAHSVAYTNSVEN 260
Cdd:TIGR01962 4 ILNLGPQHPSTH--GVLRLILelDGEYVVRADPHIGYLHRGTEKLAE-NRTYQQYIPYTDRLDYLSPFSNELAYCLAVEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 261 ALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDiL 340
Cdd:TIGR01962 81 LLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVALD-L 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 341 KEQRLQTL-KLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLRFDHPYADYGNIPK 403
Cdd:TIGR01962 160 PENWLEEIrEFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKdaldwgltgpmlrgsgIDWDIRKSEPYEGYDEYDF 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 404 TLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKP--------------HAFAL---GF------- 459
Cdd:TIGR01962 240 DVPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPppkermltsmealiHHFKLvteGFrvpagev 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130412 460 ---VEAPRGE-DVHWSMLGDNqKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:TIGR01962 320 yvpIESPKGElGFYIISDGGT-KPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
13-523 |
3.97e-50 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 181.66 E-value: 3.97e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 13 ILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGW--LPVLFGNDERtLNGHYA---------VYYAL 81
Cdd:PRK11742 1 VIGELRNRFGPDAFTVQATRTGIPVVWVKREQLLEVLRFLRKLPKPYvmLFDLHGIDER-LRTHREglpaadftvFYHLI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 82 SMEGAEKcwIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWpeDMHPLRKD------- 154
Cdd:PRK11742 80 SIERNRD--IMLKVALSENDLHVPTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTW--EGHPLRKDyparate 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 155 -------------AMD-YRLRPE-----PTTDSETYPFINegnsdarvipVGPLHITSDepGHFR--LFVDGEQIVDADY 213
Cdd:PRK11742 156 fdpfeltkakqdlEMEaLRFKPEewgmkRGTDNEDFMFLN----------LGPNHPSAH--GAFRivLQLDGEEIVDCVP 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 214 RLFYVHRGMEKLAEtRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLS 293
Cdd:PRK11742 224 DIGYHHRGAEKMGE-RQSWHSYIPYTDRIDYLGGCMNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIGTF 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 294 CHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRlqtlKLVRE----MRADVSELVEMLLATP 369
Cdd:PRK11742 303 IQDVGAMTPVFFAFTDRQKIYDVIEAITGFRMHPAWFRIGGVAHDLPRGWD----RLLREfldwMPKRLDEYEKAALRNS 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 370 NMEQRTQGIGILDRQ----------------IARDLRFDHPYADYGN----IPktlfTFTGGDVFSRVMVRVKETFDSLA 429
Cdd:PRK11742 379 ILKGRTQGVAAYNAKealewgvtgaglratgIDFDVRKARPYSGYENfdfeVP----VGGNGDCYDRVMVKVEEMRQSLR 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 430 MLEFALDNMP------DTPLLTE------------------GFSYK---PHAFALGFVEAPRGEDVHWSMLGDNQKLFRW 482
Cdd:PRK11742 455 IIEQCLDNMPegpfkaDHPLTTPppkertlqhietlithflQVSWGpvmPANESFQMIEATKGINSYYLTSDGSTMSYRT 534
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 16130412 483 RCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:PRK11742 535 RIRTPSFAHLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVDR 575
|
|
| PRK12322 |
PRK12322 |
NADH-quinone oxidoreductase subunit D; |
186-516 |
1.05e-47 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 183437 [Multi-domain] Cd Length: 366 Bit Score: 170.27 E-value: 1.05e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 186 VGPLHITSDepGHFRLFV--DGEQIVDADYRLFYVHRGMEKLAETRMgYNEVTFLSDRVCGICGFAHSVAYTNSVENALG 263
Cdd:PRK12322 11 VGPQHPSTH--GVFRLVLkiDGEIIVEATPVIGYLHRGTEKLAESLQ-YTQIIPYTDRMDYLSAMTNNYVYCHAVETMMG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 264 IEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDIlKEQ 343
Cdd:PRK12322 88 LEVPERAEYLRVIAMELGRIASHLVWWGTYLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRIGGVKWDA-PDG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 344 RLQTLK-LVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIA----------------RDLRFDHPYADYGNIPKTLF 406
Cdd:PRK12322 167 WIEKVKeFVPYMREQLAGYHDLVTGNEIFLNRVKGVGIYSAEEAisyslsgvnlrctgvnWDLRKDEPYSIYDRFDFDIP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 407 TFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDT-PLLTE--GFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWR 483
Cdd:PRK12322 247 VGSVGDCWDRYVCRMQEIEQSLKIIEQAVEQFPKEgPVLAKvpKIIKAPKGEAYVRIESPRGEIGCYIASDGKKKPYRLK 326
|
330 340 350
....*....|....*....|....*....|...
gi 16130412 484 CRAATYANWPVLRYMLRGNTVSDAPLIIGSLDP 516
Cdd:PRK12322 327 FRRPSFYNLQILPKLLKGENIANLIAILGSIDI 359
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
297-523 |
2.62e-42 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 152.54 E-value: 2.62e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 297 VGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQ 376
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 377 GIGILDRQ----------------IARDLRFDHPYADYGN----IPktlfTFTGGDVFSRVMVRVKETFDSLAMLEFALD 436
Cdd:pfam00346 81 GVGVLSAEdalalgvtgpmlrasgVPWDLRKDEPYSGYDEldfdVP----VGTEGDCYDRYLVRMEEMRQSLRIIRQCLD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 437 NMPDTPLLTEGFSYKP--------------HAFAL---GF----------VEAPRGEdvhwsmLG------DNQKLFRWR 483
Cdd:pfam00346 157 KLPEGPVMADDPKIALppkeemktsmealiHHFKLvteGFrvpagevyvaVEAPKGE------LGfylvsdGGTKPYRVK 230
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 16130412 484 CRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:pfam00346 231 IRAPSFANLQALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| PRK07415 |
PRK07415 |
NAD(P)H-quinone oxidoreductase subunit H; Validated |
176-523 |
4.76e-33 |
|
NAD(P)H-quinone oxidoreductase subunit H; Validated
Pssm-ID: 180969 [Multi-domain] Cd Length: 394 Bit Score: 130.24 E-value: 4.76e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 176 EGNSDARVIPVGPLHITSDepGHFRLFV--DGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLS--DRVCGICGFAHS 251
Cdd:PRK07415 5 ETRTEPMVLNFGPHHPSMH--GVLRLIVtlDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSrwDYAAGMFNEAIT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 252 VaytNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRkTYGLNL 331
Cdd:PRK07415 83 V---NAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQR-LINNNY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 332 --IGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLR-FD 392
Cdd:PRK07415 159 frIGGVAADLPYGWLEKCLDFCDYFGPKIDEYEKLITNNPIFRRRIEGLGTISREeainwglsgpmlrasgVKWDLRkVD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 393 HpYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPL-------LTEG-------FSYK------- 451
Cdd:PRK07415 239 H-YECYDDFDWDVAWETEGDCLARYRVRIEEMRESVKIIRQACKGIPGGPYenleakrMAEGkksewngFDYQyvakkva 317
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130412 452 -----PHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDR 523
Cdd:PRK07415 318 ptfkiPNGELYVRLESGKGELGIFIQGNNDVTPWRWKIRAADFNNLQILPHLLKGAKVADIMAILGSIDVIMGSVDR 394
|
|
| Complex1_30kDa |
pfam00329 |
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; |
38-154 |
2.42e-27 |
|
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
Pssm-ID: 459763 [Multi-domain] Cd Length: 121 Bit Score: 106.41 E-value: 2.42e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 38 ITVKINLLPDVVQYLYYQHDG--WLPVLFGNDERTlNGHYAVYYALSMEGaEKCWIVVKALVDaDSREFPSVTPRVPAAV 115
Cdd:pfam00329 1 VTVDPEDLLEVARFLRDDELGfdHLSDLTGVDYPE-EGRFEVVYHLLSIT-HNVRVRVKVPLE-DDPVVPSVTDIWPGAN 77
|
90 100 110
....*....|....*....|....*....|....*....
gi 16130412 116 WGEREIRDMYGLIPVGLPDQRRLVLPDDWPedMHPLRKD 154
Cdd:pfam00329 78 WYEREVYDMFGIVFEGHPDLRRILLPEDWE--GHPLRKD 114
|
|
| NuoC |
COG0852 |
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ... |
11-154 |
7.04e-26 |
|
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440613 [Multi-domain] Cd Length: 164 Bit Score: 103.76 E-value: 7.04e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 11 EAILAALKTQFPGAVLDEERQtPEQVTITVKINLLPDVVQYLYyQHDGW--LPVLFGNDERTLNGHYAVYYAL-SMEgaE 87
Cdd:COG0852 5 EELLEALEEKFGDAVLEVEEA-RGELTLTVPPEDLVDVARFLR-DDLGFdhLSDLTGVDYPERGDRFEVVYHLlSLT--H 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130412 88 KCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWpeDMHPLRKD 154
Cdd:COG0852 81 NRRLRLKVFVPRDDPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDW--EGHPLRKD 145
|
|
| ndhH |
CHL00017 |
NADH dehydrogenase subunit 7 |
180-515 |
2.17e-25 |
|
NADH dehydrogenase subunit 7
Pssm-ID: 176960 Cd Length: 393 Bit Score: 108.25 E-value: 2.17e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 180 DARVIPVGPLHITSDepGHFRLFV--DGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLS--DRVCGICGFAHSVayt 255
Cdd:CHL00017 9 DLMIVNMGPHHPSMH--GVLRLIVtlDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTrwDYLATMFTEAITV--- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 256 NSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGV 335
Cdd:CHL00017 84 NAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 336 RRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQ----------------IARDLR-FDHpYADY 398
Cdd:CHL00017 164 AADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEeainwglsgpmlrasgIQWDLRkVDH-YECY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 399 GNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTP---LLTEGFSYKPHA----FALGF------------ 459
Cdd:CHL00017 243 DEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPyenLEARRFDREKDSewndFEYRFiskkpsptfels 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130412 460 -------VEAPRGEdVHWSMLGDNQKL-FRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLD 515
Cdd:CHL00017 323 kqelyvrVEAPKGE-LGIFLIGDDSVFpWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSID 385
|
|
| PRK06074 |
PRK06074 |
NADH dehydrogenase subunit C; Provisional |
7-154 |
6.68e-15 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 235691 [Multi-domain] Cd Length: 189 Bit Score: 73.02 E-value: 6.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 7 SNRGEAILAALKTQFPGAVLDEERQTPEqVTITVKINLLPDVVQYLYYQHDGWLPVL---FGNDERTLNGHYA-VYYALS 82
Cdd:PRK06074 1 SEKLEELVAKLLEKLPDAIGKVTVAFGE-LTLKVPAEKILEVLTFLRDDPELRFEQLidlTGVDYPERGKRFEvVYHLLS 79
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16130412 83 MEGAEKcwIVVKALVDADSReFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWpeDMHPLRKD 154
Cdd:PRK06074 80 YKHNVR--LRVKVRAPEDPV-VPSVVDIWPSANWYEREAYDLYGIVFEGHPDLRRILTDYGF--EGHPLRKD 146
|
|
| NuoC_fam |
TIGR01961 |
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ... |
37-154 |
8.12e-14 |
|
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]
Pssm-ID: 273897 [Multi-domain] Cd Length: 121 Bit Score: 68.03 E-value: 8.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 37 TITVKINLLPDVVQYLYYQHDGW--LPVLFGNDERTLNGHYAVYYALSMEGAEKcwIVVKALVDADSReFPSVTPRVPAA 114
Cdd:TIGR01961 2 VVWIKKEQLLEVLTFLKDPALGFelLTDVSGVDYPKEKRFEVVYHLLSIKKNRR--IRLKVRLSEDDP-VPSLTSVFPTA 78
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 16130412 115 VWGEREIRDMYGLIPVGLPDQRRLVLPDDWpeDMHPLRKD 154
Cdd:TIGR01961 79 NWYERETYDMYGIVFDGHPDLRRILMPDDF--EGHPLRKD 116
|
|
| FrhA |
COG3259 |
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion]; |
197-377 |
3.18e-13 |
|
Coenzyme F420-reducing hydrogenase, alpha subunit [Energy production and conversion];
Pssm-ID: 442490 Cd Length: 458 Bit Score: 71.72 E-value: 3.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 197 GHFRLFV---DGEQIVDAdyrlfYVH----RGMEKLAETRMgYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQR 269
Cdd:COG3259 15 GHGKITIfldDDGKVKDA-----RLHivepRGFEKFLEGRP-YEEVPDITARICGICPVAHHLASAKALEAAFGVEPPPT 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 270 AHTIRSILLEVERLHSHLLNLGL--SCHFVGFDTGF----------MQFFRVREKSMTMAELLIGsRKTYGLNLI-GGVR 336
Cdd:COG3259 89 ARKLRRLLYCGEWIQSHALHFFFlaAPDFLGYRNVLglakkhpelvKRGLRLRKLGNEIIELLGG-RAIHPVNAVpGGFS 167
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 16130412 337 RDILKEQRLQTLKLVREMRADVSELVEML--LATPNMEQRTQG 377
Cdd:COG3259 168 KAPSEEERDELLERLEEALEFAEEAVDLFkdLFLKNKDEVDFP 210
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
37-158 |
3.15e-11 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 65.39 E-value: 3.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 37 TITVKINLLPDVVQYLYYqHDG----WLPVLFGNDERTlngHYAVYYALSMEGaEKCWIVVKALVDADSREFPSVTPRVP 112
Cdd:PRK07735 308 TLVVEPEKYYEVAELLRF-HEQlafdYLSELHGTDFVT---HMEVYVHLYSYG-KRQSVAVKVKLDREAPQVESVTPLWK 382
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 16130412 113 AAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEdmHPLRKDAMDY 158
Cdd:PRK07735 383 GANWPEREAYDLLGIVFKGHPNLSRILLPDDWVG--HPLRKDYEPY 426
|
|
| HyaB |
COG0374 |
Ni,Fe-hydrogenase I large subunit [Energy production and conversion]; |
186-296 |
8.39e-11 |
|
Ni,Fe-hydrogenase I large subunit [Energy production and conversion];
Pssm-ID: 440143 Cd Length: 539 Bit Score: 64.47 E-value: 8.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 186 VGPlhITSDEpGHFR--LFVDGEQIVDAdyrlfYVH----RGMEKLAEtrmGYN--EVTFLSDRVCGICGFAHSVAYTNS 257
Cdd:COG0374 3 IDP--ITRIE-GHLRieVEVDDGVVTDA-----WSSgtmfRGFEIILK---GRDprDAWAITQRICGVCTTSHALASVRA 71
|
90 100 110
....*....|....*....|....*....|....*....
gi 16130412 258 VENALGIEVPQRAHTIRSILLEVERLHSHLLnlglscHF 296
Cdd:COG0374 72 LEDALGIEPPPNARLIRNLILAAENLHDHLV------HF 104
|
|
| PRK08491 |
PRK08491 |
NADH-quinone oxidoreductase subunit C; |
73-153 |
2.49e-10 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 181449 Cd Length: 263 Bit Score: 61.23 E-value: 2.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 73 GHYAVYYA-LSMEGAE----KCWIVVKALVDadsrefpSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEd 147
Cdd:PRK08491 96 GGFEVFYQlLSMSKRKrvrvKCFLKEKEALQ-------SVSFLFKSANWSEREMYDMFGIVINNHPYLKRILMPDDWVG- 167
|
....*.
gi 16130412 148 mHPLRK 153
Cdd:PRK08491 168 -HPLLK 172
|
|
| NiFeSe_Hases |
pfam00374 |
Nickel-dependent hydrogenase; |
241-296 |
1.47e-09 |
|
Nickel-dependent hydrogenase;
Pssm-ID: 459789 Cd Length: 495 Bit Score: 60.58 E-value: 1.47e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 16130412 241 RVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLnlglscHF 296
Cdd:pfam00374 21 RICGVCTTVHALASVRAVEDALGIKIPLNAQLIRNLIQGALFVHDHIV------HF 70
|
|
| PRK07785 |
PRK07785 |
NADH dehydrogenase subunit C; Provisional |
13-154 |
8.53e-09 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 181115 [Multi-domain] Cd Length: 235 Bit Score: 56.15 E-value: 8.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 13 ILAALKTQFPGAVldeERQTPE--QVTITVKINLLPDVVQYLYYQHD-------GWLPVLFGNDE-RTLnghYAVYYALS 82
Cdd:PRK07785 69 RLEEALPEFADAI---ERVVVDrgELTLHVRREHLVEVAQTLRDDPAlrfelclGVSGVHYPHDTgREL---HAVYHLTS 142
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16130412 83 MEGAEKcwIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEdmHPLRKD 154
Cdd:PRK07785 143 ITHNRR--IRLEVAVPDADPHIPSLVSVYPTNDWHERETYDFFGIVFDGHPALTRIEMPDDWVG--HPQRKD 210
|
|
| PRK10170 |
PRK10170 |
Ni/Fe-hydrogenase large subunit; |
178-290 |
8.94e-09 |
|
Ni/Fe-hydrogenase large subunit;
Pssm-ID: 182281 Cd Length: 597 Bit Score: 58.11 E-value: 8.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 178 NSDARVIPVGPlhITSDEpGHFR--LFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLsDRVCGICGFAHSVAYT 255
Cdd:PRK10170 13 NNAGRRLVVDP--ITRIE-GHMRceVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDAWAFV-ERICGVCTGVHALASV 88
|
90 100 110
....*....|....*....|....*....|....*
gi 16130412 256 NSVENALGIEVPQRAHTIRSILLEVERLHSHLLNL 290
Cdd:PRK10170 89 YAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHF 123
|
|
| PRK12494 |
PRK12494 |
NAD(P)H-quinone oxidoreductase subunit J; |
38-154 |
5.51e-08 |
|
NAD(P)H-quinone oxidoreductase subunit J;
Pssm-ID: 183557 [Multi-domain] Cd Length: 172 Bit Score: 52.65 E-value: 5.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 38 ITVKINLLPDVVQYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSM-EGAEKCWIV-VKALVDADSREFPSVTPRVPAAV 115
Cdd:PRK12494 43 IKVEPDFLLPIATALYAYGFNYLQCQGGYDEGPGKELVSFYHLIKVsDNADKPREVrLKVFLPRDDPRVPSVYWIWKGAD 122
|
90 100 110
....*....|....*....|....*....|....*....
gi 16130412 116 WGEREIRDMYGLIPVGLPDQRRLVLPDDWPEdmHPLRKD 154
Cdd:PRK12494 123 WQERETYDMYGINFEGHPNLKRILMPEDWVG--WPLRKD 159
|
|
| PRK10467 |
PRK10467 |
hydrogenase 2 large subunit; Provisional |
220-296 |
1.69e-07 |
|
hydrogenase 2 large subunit; Provisional
Pssm-ID: 182482 Cd Length: 567 Bit Score: 54.01 E-value: 1.69e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130412 220 RGMEKLAETRmGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLnlglscHF 296
Cdd:PRK10467 39 RGMEEIVKNR-DPRDAWMIVQRICGVCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIV------HF 108
|
|
| PRK10170 |
PRK10170 |
Ni/Fe-hydrogenase large subunit; |
416-524 |
1.28e-03 |
|
Ni/Fe-hydrogenase large subunit;
Pssm-ID: 182281 Cd Length: 597 Bit Score: 41.55 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130412 416 RVMVRVKETFDSLAMLEFALD----NMPDTPLLT------EGFSYKPHAFALGFVEAPRGEDVHWSMLGDnQKLFRWRCR 485
Cdd:PRK10170 451 RILCRAHEAQWAAGKLQYFFDklmtNLKNGNLATastekwEPATWPTECRGVGFTEAPRGALGHWAAIRD-GKIDLYQCV 529
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 16130412 486 AATYANWP---------VLRYMLRGN--TVSDAPLII----GSLDPCYSCTDRV 524
Cdd:PRK10170 530 VPTTWNASprdpkgqigAYEAALMNTkmAIPEQPLEIlrtlHSFDPCLACSTHV 583
|
|
| ndhJ |
CHL00012 |
NADH dehydrogenase subunit J |
105-154 |
2.85e-03 |
|
NADH dehydrogenase subunit J
Pssm-ID: 176955 [Multi-domain] Cd Length: 158 Bit Score: 38.52 E-value: 2.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 16130412 105 PSVTPRVPAAVW-------GEREIRDMYGLIPVGLPDQRRLVLPDDWPEdmHPLRKD 154
Cdd:CHL00012 91 PRKNPRIPSVFWvwksadfQERESYDMLGISYDNHPRLKRILMPESWIG--WPLRKD 145
|
|
| |
