|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
16-608 |
0e+00 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 1017.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 16 AAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYN 95
Cdd:PRK08042 1 AAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLFN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 96 IDWHRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQR 175
Cdd:PRK08042 81 IDWHRHAQVKANGLLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTGNSKEGKLWFALGRLGTLLLAIACWLLWQR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 176 YGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNA 255
Cdd:PRK08042 161 YGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 256 PLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLF 335
Cdd:PRK08042 241 PLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 336 KSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPL 415
Cdd:PRK08042 321 KSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 416 LAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPAN 495
Cdd:PRK08042 401 LAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPAN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 496 TTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSL 575
Cdd:PRK08042 481 TTVSQPMITLLLIACPLLPFIIMAIFKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKEAFAPVLKLRKWLNPVSL 560
|
570 580 590
....*....|....*....|....*....|...
gi 16130630 576 VPGWQCEGSALLFRRMALVELAVLVVIIVSRGA 608
Cdd:PRK08042 561 VPGWQCAGSALLFRRLALVELAVLVVIVVSRGA 593
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-572 |
7.22e-129 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 393.48 E-value: 7.22e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 1 MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSL----VSYDVQISPL 76
Cdd:PRK06521 2 MLALQLLLLSLLLYLALGLAGLLLLRRPRLAIRLSGPTGLLGGLLGLASGLTALFAGPTLAAVLPLglpfLPFHLRLDAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 77 NAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGL---QINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL-------TS 146
Cdd:PRK06521 82 SAFFLLVISLLGAAASLYSLGYFREYEGKGPGAmgfFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLvianhreAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 147 NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRllDMRMQQLP--LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHAN 224
Cdd:PRK06521 162 IRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFA--AMRAAHLSpfWASLVFLLALFGFGAKAGLVPLHVWLPRAHPA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 225 ASAPAAALFSTVVMKIGLLGILTLSLLGGNAP-LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGL 303
Cdd:PRK06521 240 APSHVSALMSGVMLKVAIYGILRVVFDLLGAPgWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 304 GAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALP 383
Cdd:PRK06521 320 GLAMVFIAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 384 PLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVV 463
Cdd:PRK06521 400 PLNGFVSEWLLLQSLLSSPGLPQWGLKLAVPIAAAMLALTAALAAMCFVKFYGITFLGRPRSEKAEEAHEVPRWMRAAML 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 464 ALAICCVIGGVAAPWLLPMLSAAV----------------PLPLEPANTTVSQPMITLLLIACPLLPFIImAICKGDRLP 527
Cdd:PRK06521 480 LLAALCVLLGLLPGWVAPVIDPVAqalvgtplvtvasgllLVPVSSSRASYSPLLFLLLLLALALLPLYW-LLVRRFRAG 558
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 16130630 528 SRSRGAAWVCGYDHEKSMVI-TAHGFAMPVKQAFAPVLKLRKWLNP 572
Cdd:PRK06521 559 RRRRGPAWACGYPWETAMAQySAEGFAQPIRRVFAPLFRLRRQLPP 604
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
10-568 |
5.22e-75 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 251.96 E-value: 5.22e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 10 GVAWFVAAAVLAFLFSfQKALSGWIAGIGGAVGSLYTAAAG-FTVLTGA---VGVSGALSLVSYDVQISPLNAIWLITLG 85
Cdd:PRK08667 9 AILLLLAAAVIPLVFR-HKRKRVWQSVLWLVIAIALLLFAGsLQLFTGNpldIPLWGIAPGLDITFHIDRLAAFFIILIG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 86 LCGLFVSLYNIDW--HRHAQVKCNGLQ--INMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL-------TSNSKEGKLW 154
Cdd:PRK08667 88 LVSLCVAIYSLGYneHMSSNERANLLSalTALFILSMLGVVASANTFSFLFFWEIMALSSFFLvmndyqeEETQRAGIFY 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 155 FALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLgsdIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFS 234
Cdd:PRK08667 168 FVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSL---VFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 235 TVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQ 314
Cdd:PRK08667 245 GVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 315 PALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 394
Cdd:PRK08667 325 DTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 395 YQSFFKlsnSGAFVARLLGPLLAVGLAI---TGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVI 471
Cdd:PRK08667 405 YESFFQ---SFSVADPLIKILLFSVLAIfalTSALAAACFVKAFGITFLAMPRSQEARSAKEVSKPMLIGPAVLAVACLV 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 472 GGVAAPWLLPMLSAAVPLPlepanttvSQPMITLLLIACPLLPFIIMAIcKGDRLPSRSRgaAWVCGY-DHEKSMVITAH 550
Cdd:PRK08667 482 LGLFSVQIFSLAGYSFDLP--------DLLLVGLLLVIFGVLVFGMVRL-FSPRKSRISE--TWACGYpRPTPRMEYTAS 550
|
570
....*....|....*...
gi 16130630 551 GFAMPVKQAFAPVLKLRK 568
Cdd:PRK08667 551 GFSEPLVQIFRLIYRTRI 568
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-438 |
8.36e-74 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 242.75 E-value: 8.36e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 11 VAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV---SGALSLVSYDVQISPLNAIWLITLGLC 87
Cdd:COG0651 9 VLLPLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVyalGGWPAPFGIVLVADRLSALFLLLTALV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 88 GLFVSLYNIDWHRH-AQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTS------NSKEGKLWFALGRL 160
Cdd:COG0651 89 ALAVLLYSIGYMRHeRRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAlggtkeALRAGLKYLILNLV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 161 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP--LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVM 238
Cdd:COG0651 169 GSALFLLGVGLLYGATGTLNMADLAARLAELDpgLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLT 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 239 K--IGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpa 316
Cdd:COG0651 249 KvgVYAILRVLTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGT--------- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 317 liALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 396
Cdd:COG0651 320 --PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 16130630 397 SFFKLSNsgafvarllgPLLAVGLAITGALAVMCMAKVYGVT 438
Cdd:COG0651 398 AALEAGA----------WLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
16-509 |
1.45e-47 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 176.11 E-value: 1.45e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 16 AAAVLAFLFS--FQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV-------SGALSlVSYDVQISPLNAIWLITLGL 86
Cdd:COG1009 13 LGALLAGLLGrrLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVelytwipVGSLG-LDFGFRLDGLSLLMLLLVTG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 87 CGLFVSLYNI-------DWHRHAQVkcnglqINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL-------TSNSKEGK 152
Cdd:COG1009 92 VGLLVHIYSIgymsgdpGLARFFAY------LLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLigfwyekPSARRAAR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 153 LWFALGRLGTLLLAIACWLLWQRYGTLDLRLLdmrMQQLPLGSDIWLLGVIGFGLLAG------IIPLHGWVPQAHANAS 226
Cdd:COG1009 166 KAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL---LAAAPTILSSPLLTLILLLLLLGafgksaQFPLHFWLPDAMEGPT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 227 APAAALFSTVVMKIGLLGILTLSLLGGNAPlWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAG 306
Cdd:COG1009 243 PVSALLHAATMVKAGVYLLARLSPLFALSP-VWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 307 vtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLN 386
Cdd:COG1009 322 --------------AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFA 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 387 GFAGEWVIYQsffklsnsGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALA 466
Cdd:COG1009 388 GFFSKEAILE--------AALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLA 459
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 16130630 467 ICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIA 509
Cdd:COG1009 460 VLSLVLGLLLPGLLEGLLAPAAVLGGELHLAHGLLLNALPLLL 502
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-479 |
1.40e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 166.04 E-value: 1.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 1 MSAISLINSGV--AWFVAAAVLAFLFSFQKALSGWIAGIggavgSLYTAAAGFTVLTGAVGVSGALSLVSYDVqiSPLNA 78
Cdd:PRK08376 21 MPIVSLLGGKAreIWAVLISFLTLIVALLVFYEVWNNGT-----IVYVLGAESPTLTLPFGSGGFPIRIIWEV--DLFGA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 79 IWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVCA-VIASNLGMFVVMAEIMALCAVFLTS-------NSKE 150
Cdd:PRK08376 94 FMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGmAITGDLFNFFVFLEIMSIASYALVAfrndtweAIEA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 151 GKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLL--AGIIPLHGWVPQAHANASAP 228
Cdd:PRK08376 174 GIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIAGLAmkSGAVPVHMWLPDAYPAAPSS 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 229 AAALFstVVMKIGLLGILTLSLLGGNAP----LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLG 304
Cdd:PRK08376 254 ISAML--LVIKQAGLYALARVLFSIYGPainlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLG 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 305 AGVTgiALEQPALIALG---LVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAA 381
Cdd:PRK08376 332 VGLA--ALGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVG 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 382 LPPLNGFAGEWVIYQSFFklsnsgafvarLLGPLLAVGLAITGALAVMCMAKVYGVTFLGaPRTKEAENATCAPLLMSVS 461
Cdd:PRK08376 410 LPPFNGFASKWLIYESSA-----------LFNPILGVIAMIGSVLTLASFVKVFHTAFFG-PPSEKVMNVKEPPKPMLVP 477
|
490
....*....|....*...
gi 16130630 462 VVALAICCVIGGVaAPWL 479
Cdd:PRK08376 478 MLILAIAIIGMGL-FPWQ 494
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-494 |
1.73e-39 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 151.19 E-value: 1.73e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 14 FVAAAVLAFLFSFQKAlsGWIAGIGGAVGSLYTAAA-GFTVLTGAV---GVSGALSLVSYDVQISPLNAIWLITLGLCGL 89
Cdd:PRK08375 14 LLAAALIVLLPKRRRL--RWALALLVAALTFALAISlLPQVLDGGViayVVGGWPPGIGIELRADSLSALFLLVTSILAI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 90 FVSLYNIDWHRHAQVKCNGLQInMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKE------GKLWFALGRLGTL 163
Cdd:PRK08375 92 AALLYAIGYGEHRQTRFYALFL-LLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDrralaaARKYLIVGLIGST 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 164 LLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI--- 240
Cdd:PRK08375 171 FLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVavy 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 241 -GLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAgvtgialeqpaLIA 319
Cdd:PRK08375 251 aLIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLAL-----------LTP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 320 LGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQsff 399
Cdd:PRK08375 320 LALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVV--- 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 400 klsnsGAFVARLLGPLLAVGLAitGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWL 479
Cdd:PRK08375 397 -----GAVEAGQWLVLAVLLAS--SLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPL 469
|
490
....*....|....*
gi 16130630 480 LPMLSAAVPLPLEPA 494
Cdd:PRK08375 470 LQLADAAAAGLLGTS 484
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
14-485 |
6.30e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 145.52 E-value: 6.30e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 14 FVAAAVLAFLFsfqKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVG----VSGALSLVsydVQISPLNAIWLITLGLCGL 89
Cdd:PRK08668 10 PLIGSVLAYLL---KKINEKIGVIGNALPLLFLIKLYFTLKVGTGEkltlFFGGFKLT---FTLTHLSWFFAMISLLVIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 90 FVSLYNIDWHRHAQVKCNGLQInMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLT-----SNSKEGKLWFALGRLGTLL 164
Cdd:PRK08668 84 SVAFFMVSEKTKNDAYFNMFAL-MSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVpmgkkESRKASLKYFVLSAIGAYA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 165 LAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIW--LLGVIGFGLL-AGIIPLHGWVPQAHANASAPAAALFSTVVMK-- 239
Cdd:PRK08668 163 MLYAIFLIYAKTGTFDFADISQGLINDTSTGFALivFLFLLAFGVAkAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKlg 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 240 ----------IGLLGILTLSLLGGNAPLWwGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtg 309
Cdd:PRK08668 243 aygfllvlyvLPGTKLFSEFGTYRGVPLF-NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGT-- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 310 ialeqpaliALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFA 389
Cdd:PRK08668 320 ---------SLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 390 GEWVIYQSffklsnsgafVARLLGPLLAVGLAITGALAVMCMAK-VYGVtFLGApRTKEAENATCAPLLMSVSVVALAIC 468
Cdd:PRK08668 391 SKWLIFEA----------LISKGMPITAFMAFFGSIGSFLYVFRpLAGV-FLGQ-LPSDHKDVKEAPLPMLIPMAILVLL 458
|
490
....*....|....*..
gi 16130630 469 CVIGGVAAPWLLPMLSA 485
Cdd:PRK08668 459 NVVFGVAPGLVLQEINK 475
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-479 |
7.63e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 144.34 E-value: 7.63e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 76 LNAIWLITLGLCGLFVSLYNIDWHRHAQVKC------NGLQINMLMaaavCAVIASNLGMFVvMAEIMALCAVFLTSNSK 149
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGPEwyytllLGLEAGMLG----ILLTGDAFNLFV-MLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 150 EGK------LWFAL-GRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQL-------PLGSDIWLLGVIG------FGLLA 209
Cdd:PRK12667 158 DRGdaveaaIKYALiGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLsfpltggLAGNPPLALGVALalalwaFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 210 GIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL-------TLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEH 282
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIrflytifGISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 283 NIQRLLAYHTLENIGIILLGLGAGVTgialeqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIG 362
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQ-----------LGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 363 KKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNsgafvarllgPLLAVGLAITGALAVMCMAKVYGVTFLGA 442
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGF----------YLPALVLLIASAISLVGYFRAWYSLFFGK 456
|
410 420 430
....*....|....*....|....*....|....*..
gi 16130630 443 PRTKEAENATCAPlLMSVSVVALAICCVIGGVAAPWL 479
Cdd:PRK12667 457 PKSGEEVEHKESP-SMSVVILVLALAVLILGILALFL 492
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
14-489 |
2.21e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 120.00 E-value: 2.21e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 14 FVAAAVLAFLFSfqkalsgwiAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVSYDVQI------SPLNAIWLITLGLC 87
Cdd:PRK12668 12 FIAGALLVPFLP---------GRARKALLLLAPVLAVLAVLTVPEGTYLTVTFLGFDLVLgrvdklSRVFGLIFGIMAFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 88 GLFVSLYNIDWHRHAQVkcnglqinML-MAAAVCAVIASNLGMFVVMAEIMALCAVFLtsnskegkLWFALGR------- 159
Cdd:PRK12668 83 GVIYALHVKDPGQHVAA--------LLyVGSALGAVFAGDLLTLFVFWELMAFTSTFL--------VWARGTKaavragf 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 -------LGTLLLAIACWLLWQRYGTLDLRLLDmrmqqlPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAAL 232
Cdd:PRK12668 147 ryllvhvLGGVLLLAGILLHYAETGSFAFGAIA------GLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVF 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 233 FSTVVMKIGLLGIltlsllggnAPLWWGIALLV-LGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtgia 311
Cdd:PRK12668 221 LSAFTTKTAVYAL---------ARAFPGTELLIyIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIG----- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 312 leqpalIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGE 391
Cdd:PRK12668 287 ------TALAINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSK 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 392 WVIYQSFFKLSNSGAFVARLL---GPLLAVGLaitgalavmcmaKVYGVTFLGAPRTKEAENatcAPLLMSVSVVALAIC 468
Cdd:PRK12668 361 SMIISAAGEDHYVWVWLLLLLasaGTFLHFGI------------KLPYFAFFGGDSGLRVKD---APRNMLVAMGIAAFL 425
|
490 500
....*....|....*....|.
gi 16130630 469 CVIGGVAAPWLLPMLSAAVPL 489
Cdd:PRK12668 426 CIAIGVYPQALYALLPYPVDY 446
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
14-479 |
1.73e-27 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 116.23 E-value: 1.73e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 14 FVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFtvLTGAVGVSgaLSLVS------YDVQISPLNAIWLITLGLC 87
Cdd:PRK06525 12 FIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFY--QAGKVAVT--LTLVNlgdvalFGLVIDPVSVLIGFVVVLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 88 GLFVSLYNIDW----HRHAQVkCNGLQ-----INMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTS--NSKEGK---L 153
Cdd:PRK06525 88 GLLVTLYSTGYmspgNREHPV-HEGTGryyafLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISyyQSPKALrsaL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 154 W-FALGRLGTLLLAIACWLLWQRYGTLDLrlldMRMQQLPLGSDIWLLGVIGFGLLA--GIIPLHGWVPQAHANASAPAA 230
Cdd:PRK06525 167 KaLLITHIGSLGLYLAAATLFLQTGTFAL----SALSGLHGSLKYLVFLGILFAAWGksAQLPFYSWLPDAMEAPTPASA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 231 ALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGI 310
Cdd:PRK06525 243 YLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 311 ALeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAG 390
Cdd:PRK06525 323 RL--------ALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFS 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 391 EWVIYQSFFKLSNSgafVARLLGPLLAVGLAITGALAVMCmaKVYGVTFLGAPrTKEAENATCAPLLMSVSVVALAICCV 470
Cdd:PRK06525 395 KFPIFAAGFELSVE---YWILLPAMVLLLIESVASFAWFL--RWFGRVVFGEP-SEAVADAAPLPGSMKLVLIVLIVMSL 468
|
490
....*....|
gi 16130630 471 IGGV-AAPWL 479
Cdd:PRK06525 469 VSPViAAPWL 478
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
160-487 |
3.48e-27 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 115.18 E-value: 3.48e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 237
Cdd:COG1008 172 AGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLafFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 238 MKIGL-LGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTgialeqpa 316
Cdd:COG1008 252 LKMGGyGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNP-------- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 317 liaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 396
Cdd:COG1008 324 ---LGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 397 SFFKLSnsgafvarllgPLLAVGLAITGALAVMCMAKVYGVTFLGaPRTKEAENATCAPLLMSVSVVALAICCVIGGVAA 476
Cdd:COG1008 401 GAFQVN-----------PWLAILAALGLILTAAYLLWMYQRVFFG-PLKEELAELPDLNPRELAVLAPLAALILLLGLYP 468
|
330
....*....|.
gi 16130630 477 PWLLPMLSAAV 487
Cdd:COG1008 469 QPLLDLIEPSV 479
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
11-467 |
1.58e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 113.49 E-value: 1.58e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 11 VAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTgaVGVSGALSLVSYDVQISPLNAIWLITLGLCGLF 90
Cdd:PRK06458 7 FALLLLIPLLASLLLFALRKRRLVATLNVLGITLTLILALWLVFT--VPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 91 VSLYNIDWHRHAQV--KCNGLQI-------NMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL-----TSNSKEGKlW-- 154
Cdd:PRK06458 85 TSLYSIGYMRHEVEhgELSPVTLrlyygmyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLvgiyrTRASLEAA-Wky 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 155 -------FALGRLGTLLL-------------AIACWLLWQRYGTLDLRLLDMRMqqlplgsdIWLLgvIGFGLLAGIIPL 214
Cdd:PRK06458 164 iiicsvgVAFALFGTILVyanaatvmgdgemAILWTELLKHASLLDPTLMKLAF--------VFLL--IGFGTKVGLFPM 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 215 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAP--LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHT 292
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIgsDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 293 LENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAM 372
Cdd:PRK06458 314 IEHMGLIAFALGIGG-----------PLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 373 LVGLMAMAALPPLNGFAGEWVIYQSFFKLSnsgafvARLLGPLLAVGLAIT-GALAVMCMAKVYGVTFLGAPRTKEAENA 451
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLILTAGLARG------PLLIAILLLLLLTLAfAALVRRVAGMVFGEPPEAVNRGDLGWLT 456
|
490
....*....|....*.
gi 16130630 452 TCAPLLMSVSVVALAI 467
Cdd:PRK06458 457 TSPMFVHLVLVLVLGL 472
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
124-399 |
2.98e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.98e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 124 ASNLGMFVVMAEIMALCAVFL-------TSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSD 196
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLigywgksPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 197 IWLLG---VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFV 273
Cdd:pfam00361 81 LLLLFlliLVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 274 GGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGH- 352
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIY-----------GIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHt 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 16130630 353 RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 399
Cdd:pfam00361 230 RNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
73-394 |
1.37e-24 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 107.54 E-value: 1.37e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 73 ISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGK 152
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 153 LWFA------LGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQL-PLGSDIWLLGVI-GFGLLAGIIPLHGWVPQAHAN 224
Cdd:PRK08377 156 AAEAsmkyivLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIdPTVAQVGLALLIfGLAVEAELFPLNAWAPDAYQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 225 ASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIA--LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLG 302
Cdd:PRK08377 236 APHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 303 LGAGVTgialeqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAAL 382
Cdd:PRK08377 316 LALGTQ-----------AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGI 384
|
330
....*....|..
gi 16130630 383 PPLNGFAGEWVI 394
Cdd:PRK08377 385 PLFNVFWSKFRI 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
161-443 |
4.92e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 105.79 E-value: 4.92e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 161 GTLLLAIACWLLWQRYGTLDLrlLDMRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVM 238
Cdd:TIGR01972 169 SLLMLLAILGLYFLGGGTFDL--LELLNLPLPFGVQTWLFLafFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 239 KIGLLGILTLSLLGG-NAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpal 317
Cdd:TIGR01972 247 KMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFN---------- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 318 iALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 397
Cdd:TIGR01972 317 -ELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLG 395
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 16130630 398 FFKLSNSGAFVArllgpllavglAITGALAVMCMAKVYGVTFLGAP 443
Cdd:TIGR01972 396 SFKVNPVVAFLA-----------ALGIVLAAAYMLTLYKRVFFGEL 430
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
256-504 |
1.02e-22 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 103.08 E-value: 1.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 256 PLW-WGIALLvlGMITAFVGGLYALVEHNIQRLLAYHTLENIGII--LLGLGAGVTGIALEQPALIALGLVGGLYHLLNH 332
Cdd:PRK12645 271 QVWfWTVTLV--GLITLFWGSLNAVKQTDLKGILAFSTVSQLGLImsLLGIGAASLHYQGDDSKIYAAAITAAIFHLINH 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 333 SLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLL 412
Cdd:PRK12645 349 ATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNATEANLFSLDTW 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 413 GPLLAVgLAITGALA--VMCMaKVYGVTFLGAPRTKEAE-NATCAPLLMSVSVVALAICCVIGGvaapwLLP-MLSAAVp 488
Cdd:PRK12645 429 GVLFPV-IAWVASVFtfVYSI-IFIFKTFFGKYKPEQLPkKAHEAPIGMLISPIILASLVVVFG-----LFPnILTNSI- 500
|
250
....*....|....*.
gi 16130630 489 lpLEPANTTVSQPMIT 504
Cdd:PRK12645 501 --IEPAVSAILPTLID 514
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
258-487 |
1.45e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 99.22 E-value: 1.45e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 258 WWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvTGIALEQPALialglvgglyHLLNHSLFKS 337
Cdd:PRK12647 257 LWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLG-SELAIKAAVL----------FLVAHSLYKG 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 338 VLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFfklsnsgafvarLLGPLLA 417
Cdd:PRK12647 326 ALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAL------------LEAPLWS 393
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130630 418 VGLAITGALAVMCMAKVYGVT----FLGaPRTKEAENATCAPLLMSVSVVALAICCVIGGVaAPWLLP--MLSAAV 487
Cdd:PRK12647 394 LILTVAAVLGNALMVAVAFLVgikpFLG-KLVETPKHPHEAPVLMWLGPAVLAVLGLLFGL-FPFFFHaaLLSPAA 467
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
115-487 |
1.92e-21 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 99.35 E-value: 1.92e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 115 MAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRL-----GTLLLAIACWLLWQRYGTLDLRLLdmrmq 189
Cdd:PRK12650 120 MAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRTLiltffGGLTLLAAVAIAATQTGTTSLSGI----- 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 190 qlpLGSDIW-----LLGVIGFgLLAGI-------IPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPl 257
Cdd:PRK12650 195 ---LHSDVWaekpgLTTVVAV-LIAVAaftksaqFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA- 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 258 WWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPALIALGLVgglyHLLNHSLFKS 337
Cdd:PRK12650 270 VWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI-------VATIGVGTPFALTAAVV----HTLAHALFKS 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 338 VLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVarllgPLLA 417
Cdd:PRK12650 339 SLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGV-----VLLL 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130630 418 VGLAITGALAVMCMAKVYGVTFLGAPR----TKEaenatcAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAV 487
Cdd:PRK12650 414 VGAALGAVFTFAYSARLVLGAFVDGPRdmshVKE------APVSLWLPAALPGALSLPLGLVPGLLDAPVSAAA 481
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
259-485 |
2.32e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 98.84 E-value: 2.32e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALeqpalialglvGGLYHLLNHSLFKSV 338
Cdd:PRK12644 266 WRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAAL-----------AGLAMLLAHALFKAA 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 339 LFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGafvarLLGPLLAV 418
Cdd:PRK12644 335 LFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALG-----PAGPVVLA 409
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16130630 419 GLAITGALAVmcmakVYGVTFL-GAPRTKEAENATCAPLLMS-------VSVVALAICCVIGGVAAPWLLPMLSA 485
Cdd:PRK12644 410 GIVLGSILTV-----AYSLRFLwGAFARKPGAFPSVAVTEMHrpsplflAPPAVLAVLGLVLGLLPAPLDALLAP 479
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-388 |
1.09e-20 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 96.75 E-value: 1.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 1 MSAISLINSGVAWFVAAAVLAFLFSFQKaLSGWIAGIGGAVGSLYTAAAGFTVLTG---AVGVSGALSL-VSYDVQISPL 76
Cdd:PRK12646 1 MSLVYLLIAILVIMAMILLTSKRRALAK-YAGYIALVAPIISSIYFLIQIPSVAKLqylSTSIPWMKTLdINLDLRLDGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 77 NAIWLITLGLCGLFVSLYNIDW--HRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTS---NSKEG 151
Cdd:PRK12646 80 SLMFSLIISLIGIAVFFYATQYlsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISywyNNGDS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 152 KLW----FALGRLGTLLLAIACWLLWQRYGTLDL-RLLDMR--MQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHAN 224
Cdd:PRK12646 160 QFGaiqsFMITVFGGLALLVGFIMLYIMTGTNNItEILGQAdhIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 225 ASAPAAALFSTVVMKIGLLGILTLSLLGGNAPlWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGII--LLG 302
Cdd:PRK12646 240 PTPVSAYLHSATMVKAGIFLLFRFTPLLGLSN-MYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImaMVG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 303 LGAGVT-GIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAA 381
Cdd:PRK12646 319 IGGGYAqHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAG 398
|
....*..
gi 16130630 382 LPPLNGF 388
Cdd:PRK12646 399 VPFLNGF 405
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
111-494 |
4.85e-20 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 93.48 E-value: 4.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 111 INMLMAAAVCAVIASNLGMFVVMAEIMALCA-VFLTSNSKEGKL-----WFALGRLGTLLLAIACWLLWQRYGTLDLRLL 184
Cdd:PRK12663 114 ILLLMAGVIGSFLTGDLFNLYVWFEVMLIASfVLITLGQEREQLrgaikYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 185 DMRMQQLPLGSD---IWLLGVIGFGLLAGIIPLHgWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNA-PLWWG 260
Cdd:PRK12663 194 AMRLNDMGDTATlttIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQeRELLH 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 261 IALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNHSLFKSVLF 340
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGT-----------PAGINGAIFYLVHDMVVKTALF 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 341 LGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFklsNSGAFVarllgpLLAVGL 420
Cdd:PRK12663 342 LIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGAL---DNGAYI------LLALML 412
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130630 421 aITGALAVMCMAKVYGVTFLGaPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPA 494
Cdd:PRK12663 413 -ITSLITMYSLFRIFFLAYWG-DKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPLLNLTQDAAEGLLDPQ 484
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
265-520 |
3.78e-19 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 91.37 E-value: 3.78e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 265 VLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAG 344
Cdd:PRK06590 286 IVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVG--------------AYAAAIFHLMTHAFFKALLFLGAG 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 345 SVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAvglAIT 423
Cdd:PRK06590 352 SVIHAMHHeQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAFLT---AFY 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 424 galavmcMAKVYGVTFLGaPRTKEAENATCAPLLMSVSVVALAICCVIGGvaAPWLLPMLSAavpLPLEPANTTVSQPMI 503
Cdd:PRK06590 429 -------SFRLIFLVFHG-KEKEKIHHPHESPAVMTLPLIVLAVLSVFAG--ALIVPPFLGV---LPLTTELAHGEAEHH 495
|
250
....*....|....*..
gi 16130630 504 tlLLIACPLLPFIIMAI 520
Cdd:PRK06590 496 --LPVWVALLPLVVALA 510
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
178-423 |
4.32e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 87.39 E-value: 4.32e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 178 TLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAP 256
Cdd:PRK12561 168 TFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAH 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 257 LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAgvtgialeqpaLIALGLVGGLYHLLNHSLFK 336
Cdd:PRK12561 248 VYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAA-----------FTDLGISGAMLQMISHGLIA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 337 SVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsFFKLSNSGAFVA--RLLGP 414
Cdd:PRK12561 317 AALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTV---FLGITSSDVYSStfRTITI 393
|
250
....*....|
gi 16130630 415 LL-AVGLAIT 423
Cdd:PRK12561 394 LLaAVGLILT 403
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
261-479 |
6.42e-18 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 87.01 E-value: 6.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 261 IALLVLGMItafVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNHSLFKSVLF 340
Cdd:PRK06277 270 IALSVLAMV---FGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGT-----------PLGIVAGIFHAINHVIYKSALF 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 341 LGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSffklsnsgAFVARLlgPLLAVGL 420
Cdd:PRK06277 336 LGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQA--------AMQANM--PELAIIM 405
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 421 AITGALAVMCMAKVYGVTFLG-APRTKEAENATCAPLLMSVSVVALAICCVIGgvAAPWL 479
Cdd:PRK06277 406 IIVSIGTFVSMMKAFYLIYLKpKPEELEYKNKKVPKYAVFSLAVLTILCIILG--LFPDL 463
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
164-487 |
6.65e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 86.93 E-value: 6.65e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 164 LLAIACWLLWQRYGTLDL-----RLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVM 238
Cdd:PRK07691 173 FFVVAVAILYSVVGTLNMadisvKIAELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLT 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 239 KIGLLGIL-TLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTgialeqpal 317
Cdd:PRK07691 253 KVGVYAIArTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE--------- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 318 iaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 397
Cdd:PRK07691 324 --SGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEG 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 398 FFKlsnSGAFVARLLGPLlavglaiTGALAVMCMAKVYGVTFLGAPR-TKEAENATCAPLLmsVSVVALAICCVIGGVAA 476
Cdd:PRK07691 402 TFE---AGFYVSGIIVLL-------SSLLVLYSVIKIFLKGFWGEPKgYDLNNKVPVKKLL--LPAVVLVAITILYGLGA 469
|
330
....*....|.
gi 16130630 477 PWLLPMLSAAV 487
Cdd:PRK07691 470 EPLYPYVKQAA 480
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-484 |
6.87e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 86.79 E-value: 6.87e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 72 QISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNG---LQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL-TSN 147
Cdd:PRK06589 80 HLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSrflFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLiGHT 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 148 SKEGKLWFALGRLG------TLLLAIACWLLWQRYGTLDLrlldMRMQQLPLGSDIWLLGVIGFGLL-AGIIPLHGWVPQ 220
Cdd:PRK06589 160 RNNISLSGGYKYLKilmisaLLLFLPAVILIYTKTGNLDF----VSGGLFSKNQSIILLLMFIYGIAkTAIFPVHSWLPA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 221 AHANASAPAAALFSTVVMK-----IGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLEN 295
Cdd:PRK06589 236 AMVAHYPVSALLHAVIVVKtglfcIYKILLYIFGLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 296 IGIILLglgagvtgialEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVG 375
Cdd:PRK06589 316 LSLALL-----------SAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISIS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 376 LMAMAALPPLNGFAGEWVIYQSffkLSNSGAFVARLLGPLLAVGLAITGALAVMcmaKVYGVTFLGAPrTKEAENATCAP 455
Cdd:PRK06589 385 SLSLIGIPIFSGFISKFLILLA---ASEQNQPWLSIIVMLVVIASSILSALYLL---KILSSIYKPSL-SENSFITKSLP 457
|
410 420
....*....|....*....|....*....
gi 16130630 456 LLMSVSVVALAICCVIGGVAAPWLLPMLS 484
Cdd:PRK06589 458 YLMQISVITCCCALTLFYFIQILIREFLA 486
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
262-535 |
1.32e-17 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 86.50 E-value: 1.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 262 ALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQpalialglvgglyhLLNHSLFKSVLFL 341
Cdd:PRK07390 286 VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLL--------------LLTHAIAKALLFM 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 342 GAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFageWVIYQSFFKLSNSgafvarllGPLLAVGLA 421
Cdd:PRK07390 352 SVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGF---WALLRLADGLWAV--------SPWLVGVLL 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 422 ITGALAVMCMAKVYGVTFLGAPRTKeAENATCAPLLMSVSVVALAICCViggvaapwLLPMLSAAvpLPLEPANTTVSQP 501
Cdd:PRK07390 421 LVNALTAFNLTRVFRLVFLGKPQQK-TRRSPEVLWPMALPMVILAGFTL--------HLPLLLQQ--WGLLPSWEALNLW 489
|
250 260 270
....*....|....*....|....*....|....
gi 16130630 502 MItLLLIACPLLPFIIMAICKGDRLPSRSRGAAW 535
Cdd:PRK07390 490 AA-PLLVASGLLGVLLGAWIYLNKAWSRPIQLPL 522
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
158-474 |
1.79e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 85.56 E-value: 1.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 158 GRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIW---LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFS 234
Cdd:PRK12662 169 GTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQigvLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 235 TVVMKIGLLGILTLSLLGGNAPLW-----WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTg 309
Cdd:PRK12662 249 GTSTKVMIYLIIRIVYDVFKANFVfttlpFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTY- 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 310 ialeqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFA 389
Cdd:PRK12662 328 ----------YGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFV 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 390 GEWVIYQSFFKlsnSGAFVArllgpllAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATC--APLLMSVSVVALAI 467
Cdd:PRK12662 398 AKWYILDAFIK---SNAWIG-------LVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDKAfkTPNAMVLCIWIMAI 467
|
....*..
gi 16130630 468 CCVIGGV 474
Cdd:PRK12662 468 LSIIVGI 474
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
259-474 |
3.09e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 85.65 E-value: 3.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAgvtgIALEQPALialGLVGGLYHLLNHSLFKSV 338
Cdd:PRK12649 277 WFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGY----TTYHEPGL---GVAAATFHLLNHATFKAC 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 339 LFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAV 418
Cdd:PRK12649 350 LFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGGPFTIIIPAVAV 429
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 16130630 419 glaITGALAVMCMAKVYGVTFLGApRTKEA--ENATCAPLLMSVSVVALAICCVIGGV 474
Cdd:PRK12649 430 ---LGGVFTFAYSIKLIDGIFLGE-RTHDHlpHHIHEAPYVMLIPAAFLAGLVILFGL 483
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
267-487 |
5.09e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 85.24 E-value: 5.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 267 GMITAFVGGLYALVEHNIQRLLAYHTLENIGII--LLGLGAgvtgialeqpaliALGLVGGLYHLLNHSLFKSVLFLGAG 344
Cdd:PRK12648 278 GLITLLLGAYFALFQHDLKGLLAYSTISHLGLItlLLGLGS-------------PLAAVAAIFHIINHATFKASLFMAAG 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 345 SVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEwviyQSFFK--LSNSGAFVARLLGPLLAVglaI 422
Cdd:PRK12648 345 IIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSK----EMFFAetLDTHLLGSLDWLLPVAAT---L 417
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130630 423 TGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLL-PMLSAAV 487
Cdd:PRK12648 418 AGAFSVAYSLRFIHDVFFGPPPDDLPKTPHEPPRWMRAPVELLVLLCLLVGIFPALTVgPLLAAAA 483
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
79-499 |
6.45e-17 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 84.07 E-value: 6.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 79 IWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLmaAAVCAVIASNLGMFVVMAEIMAL---CAVFLTSNSKEGKLWF 155
Cdd:PRK06459 48 FFSIISTIVWILASLYSIEYDHYGKWLSSLYILTIL--GMAIVLTSDNYLLFLAGWEIMTIpsyVAIALTKKNKRPAFVF 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 156 -ALGRLGTLLLAIACWLLWQRYGTLDLRLLdmrMQQLPLgsdiwLLGVIGFGLLAGIIPLH--GWVPQAHANASAPAAAL 232
Cdd:PRK06459 126 mAFGELSTVLILAGFAWAFIISGTTNFSYL---PSPVPL-----ILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 233 FSTVVMKIGLLGILTLSLLGGNAP-LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIA 311
Cdd:PRK06459 198 LSATMTLMGVYGILKMTILTQTIPiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQ 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 312 LEQpALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGhrdiEKLGGIGKKMpvISIAMLVGLMAMAALPPLNGFAGE 391
Cdd:PRK06459 278 LIT-SIEHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSI----TYSKKIRNRW--IELGLTLLASSLSGLLPNIGGVAS 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 392 WVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVValaiccVI 471
Cdd:PRK06459 351 WLLLESLFMFAYVLHNVISILFIVTGAIIAMGEGLATALLIKYITYTSLFRNTKEQLSKIKKYPILLSALIV------LI 424
|
410 420
....*....|....*....|....*...
gi 16130630 472 GGVAAPWLLPMLSAAVPLPLEPANTTVS 499
Cdd:PRK06459 425 LGFTLPYLISPFKTSTTILGMLTNSLIL 452
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
160-409 |
1.16e-16 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 82.94 E-value: 1.16e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 LGTLLLAIAC----WLLWQRYGTLDLRllDMRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALF 233
Cdd:PRK05846 172 LGSLLMLVAIiylvVVYYNATGTFDIA--DLLNLPLPPGVQYWLFLafFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 234 STVVMKIGL-LGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTgial 312
Cdd:PRK05846 250 AGILLKMGAyGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQ---- 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 313 eqpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW 392
Cdd:PRK05846 326 -------LGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEF 398
|
250
....*....|....*..
gi 16130630 393 VIYQSFFKLSNSGAFVA 409
Cdd:PRK05846 399 LILLGSFQVNPVIAFIA 415
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
265-449 |
3.62e-16 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 81.99 E-value: 3.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 265 VLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAG 344
Cdd:PRK07376 296 WTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG--------------AYSAGLFHLMTHAYFKAMLFLGSG 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 345 SVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFklsnsGAFvarllgPL 415
Cdd:PRK07376 362 SVIHGmeevVGHdpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAF-----EAN------PA 430
|
170 180 190
....*....|....*....|....*....|....
gi 16130630 416 LAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAE 449
Cdd:PRK07376 431 LWFVGFLTAGMTAFYMFRMYFLTFEGEFRGNDKE 464
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-392 |
7.31e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 80.38 E-value: 7.31e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 11 VAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTA------AAGFTVLTGAVGVSgalslvsydVQISPLNAIWLITL 84
Cdd:PRK07234 6 PVWIALPFLLGFAIYLLPKLDRNLALGMAIVSAVYALglvasmVPLELTLLDNFGVT---------LRADALSGYFILTN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 85 GLCGLFVSLYNIdwhRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALcAVFL--TSNSKEGKLWFALGRL-- 160
Cdd:PRK07234 77 ALVTLAVIFYCW---ESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSI-ATFLlvAYPRTDRAIWVGLRYLfy 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 161 ---GTLLLAIACWLLWQRYGTLDLRLLDMrmqqlpLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 237
Cdd:PRK07234 153 snvAMLFYLIGAVLVYQANGTFAFSGLAT------ADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 238 MKIGLLGILTLsllggnAPLWWGIALLV--LGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGlgagvtgialeqp 315
Cdd:PRK07234 227 VKAGVFPLVRC------ALDVPGLDLIVriFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA------------- 287
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130630 316 alialGLVGGLYHlLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIsiamlVGLMAMAALPPLNGFAGEW 392
Cdd:PRK07234 288 -----PLVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-487 |
8.80e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 77.08 E-value: 8.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 14 FVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVsydvqISPLNAIWLITLGLCGLFVSL 93
Cdd:COG1007 14 LLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFV-----VDGFALFFKLLILLAALLVLL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 94 YNIDWHRHAQVKCNGLQINMLMAA--AVCAVIASNLGMFVVMAEIMALCAVFLTS------NSKEGKL-WFALGRL--GT 162
Cdd:COG1007 89 LSRDYLERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVAfrrddrRSSEAALkYFLLGALssGF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 163 LLLAIAcwLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGV----IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVm 238
Cdd:COG1007 169 LLYGIS--LLYGATGSLNLAGIAAALAAGGANSPLLLLGLvlvlAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 239 KIGLLGILTLSLLGGNAPLW--WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpa 316
Cdd:COG1007 246 KIAAFAALLRLLVEAFPGLAadWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGT--------- 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 317 liALGLVGGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIy 395
Cdd:COG1007 317 --PLGVSAALFYLLAYLFMNLGAFAVILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYV- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 396 qsFFKLSNSGAFVarllgplLAVGLAITGALAVMCMAKVYGVTFLGAPrtkEAENATCAPLLMSVSVVALAICCVIGGVA 475
Cdd:COG1007 394 --FSAAVEAGLYW-------LAVIAVLNSVISAYYYLRVVKAMYFDEP---EEEAPISAPPGLRVALVIAALLVLLLGIF 461
|
490
....*....|..
gi 16130630 476 APWLLPMLSAAV 487
Cdd:COG1007 462 PGPLLDLAAAAA 473
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
164-455 |
1.88e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.16 E-value: 1.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 164 LLAIAcwLLWQRYGTLDLRLLDMRMQQLPLG--SDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIG 241
Cdd:PRK12665 178 LIGIA--LVYAATGTLNMADLAVRLDELPSGtrTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVG 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 242 LLGILTLSLLGGNAPLWWGIaLLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALG 321
Cdd:PRK12665 256 VYAIIRTHTLLFPGGGLDTL-LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALST-----------VAG 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 322 LVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQsffkl 401
Cdd:PRK12665 324 LSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE----- 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 16130630 402 snSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAP 455
Cdd:PRK12665 399 --AGAEDGTWLAWALVAGGVVTSLLTLYAVARVWTKAFWRAREDAPEGHLADAR 450
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
113-418 |
5.25e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 74.60 E-value: 5.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 113 MLMAAAVCAVIAS--NLGMFVVMAEIMALCAVFLTS------NSKEGKL-WFALGRLGTLLLAIACWLLWQRYGTLDLRL 183
Cdd:TIGR01770 108 LLFALLGIFLLVSsnDLLSIYLGLELQSLCFYVLAGlkrksrFSTEAGLkYFILGAFSSGLLLFGISLIYGFTGSLNFED 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 184 LDMRMQQLPLGSDIWLLGVI----GFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV-MKIGLLGILTLSLLGGNAPLW 258
Cdd:TIGR01770 188 LLLFLSNGMLNISLLLLGIVlilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPkIAIFAVFLRLFLYILFGFSEA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAG-VTGIAleqpaliALGLVGGLYHLLNHSLFKS 337
Cdd:TIGR01770 268 WQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGtLEGIK-------AVLFYIFIYALMSLGAFGV 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 338 VLFLgagsvwFRTGHRD---IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsFFKLSNSGAFVARLLGP 414
Cdd:TIGR01770 341 LSLL------RSYKDEWieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYV---FFALLKSGLYWLAVIAV 411
|
....
gi 16130630 415 LLAV 418
Cdd:TIGR01770 412 LTSV 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
259-399 |
5.84e-13 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 71.60 E-value: 5.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALeqpalialglvgglYHLLNHSLFKSV 338
Cdd:MTH00209 238 FSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAF--------------FHLITHALFKAL 303
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16130630 339 LFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 399
Cdd:MTH00209 304 LFICAGNIIHSHGHsQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESML 365
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
189-399 |
7.74e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 70.90 E-value: 7.74e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 189 QQLPLGSDIWLLGVI--GFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGnaPLWWGI---AL 263
Cdd:PRK07363 197 QNLSLNTQLILLTGLllGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLF--PQTWSLvapGL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 264 LVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNHSLFKSVLFLGA 343
Cdd:PRK07363 275 AIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGT-----------QLSLLGAVAQMISHGLILALLFHLV 343
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 16130630 344 GSVWFRTGHRDIEKLGGIG---KKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 399
Cdd:PRK07363 344 GIVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
262-491 |
1.19e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 70.75 E-value: 1.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 262 ALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtgialeQPALialglvgGLYHLLNHSLFKSVLFL 341
Cdd:MTH00211 270 AVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN-------QPQL-------AFLHICTHAFFKAMLFM 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 342 GAGSVWFRT-GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFkLSNSGAFVARLLgpLLAVGL 420
Cdd:MTH00211 336 CSGSIIHGLnNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN-GSYLNAWALLLT--LLATSL 412
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16130630 421 AITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMsvsvvaLAICCVIGGVAAPW-LLPMLSAAVPLPL 491
Cdd:MTH00211 413 TAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKR------LALGSILAGFIITSnLPPEKPEILSLPF 478
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
186-399 |
2.01e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 69.73 E-value: 2.01e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 186 MRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGnaPLWWGIA- 262
Cdd:PRK06473 194 LRSHTLPLSTQLLLLApiLVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLF--PEAWVYLa 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 263 --LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNHSLFKSVLF 340
Cdd:PRK06473 272 pwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAT-----------PLSILAAVFQMISHGLISALLF 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16130630 341 LGAGSVWFRTGHRDIEKLGGI---GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 399
Cdd:PRK06473 341 LLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSF 402
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
159-388 |
5.49e-12 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 68.57 E-value: 5.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 159 RLGTLLLAIACWLLWQRYGTLDLRLLdMRMQQLPLGSDIWL------LGVIGFGLLAGiipLHGWVPQAHANASAPAAAL 232
Cdd:MTH00020 172 RVGDIGLLLAMFLLWDRFGSLDFSSV-FNMVVSAPSSDITLiclflfIGAVGKSAQLG---LHTWLPDAMEGPTPVSALI 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 233 FSTVVMKIGLLGILTLSLLGGNAPLWWgIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIal 312
Cdd:MTH00020 248 HAATMVTAGVFLLIRSSPLFEQAPLAL-IIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSI-- 324
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130630 313 eqpalialglvgGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00020 325 ------------SLFHLMNHAFFKALLFLSAGSVIHAlSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGF 389
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
263-420 |
5.69e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 68.33 E-value: 5.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 263 LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALeqpalialglvgglYHLLNHSLFKSVLFLG 342
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLAL--------------FHLYTHALFKALLFLC 308
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16130630 343 AGSVWFRT-GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFkLSNSGAFVARLLgpLLAVGL 420
Cdd:MTH00151 309 AGSIIHSSsGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSL-MSPTSLLMVLLM--FVGVGL 384
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
197-405 |
8.15e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 68.06 E-value: 8.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 197 IWLLGVIGFGLLAGiipLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIaLLVLGMITAFVGGL 276
Cdd:MTH00032 230 LLLIGCIGKSAQLG---LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI-ITIFGALTAFFAAT 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 277 YALVEHNIQRLLAYHTLENIGIILLglgagVTGIALEQPAlialglvgGLYHLLNHSLFKSVLFLGAGSVWFRTG--HRD 354
Cdd:MTH00032 306 VGLVQNDLKKVIAYSTCSQLGYMVL-----IIGIEGSHNV--------GLFHLVNHAFFKALLFLSAGSVIHSTTvdEQD 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 16130630 355 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSG 405
Cdd:MTH00032 373 MRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMG 423
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
177-398 |
1.75e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 66.65 E-value: 1.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 177 GTLDLRLLDMRMQQLPLGSDIWLLG--VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG- 253
Cdd:PRK02546 193 DTPTFDMTALAAKDFGLGFQLLCYAglLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLp 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 254 NAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGagvtgialeqpALIALGLVGGLYHLLNHS 333
Cdd:PRK02546 273 DAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-----------SFTDLGTSGAMLQMISHG 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16130630 334 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSF 398
Cdd:PRK02546 342 LIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGF 406
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
258-507 |
5.22e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 65.56 E-value: 5.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 258 WWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALeqpalialglvgglYHLLNHSLFKS 337
Cdd:MTH00207 241 WFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLAL--------------FHLITHALFKA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 338 VLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF-AGEWVIYQSFFKLSNSGAfvarLLGPL 415
Cdd:MTH00207 307 LLFVCAGSLIHSHHHsQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFySKDLILESSLFYPHNSLM----ILMIF 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 416 LAVGLaiTGALAV-MCMAKVYGvtflgaprtkeaeNATCAPLL--------MSVSVVALAICCVIGGVAAPWLLpmlsaa 486
Cdd:MTH00207 383 LATAL--TAAYSTrFTLAVLWS-------------PNSSSPYHhlededksLTTPMLLLTLGAITSGSALNWWL------ 441
|
250 260
....*....|....*....|.
gi 16130630 487 vPLPLEPANTTVSQPMITLLL 507
Cdd:MTH00207 442 -PTPQEEPILPLQYKLLPLLV 461
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
265-388 |
1.54e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 63.87 E-value: 1.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 265 VLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLglgagVTGIaleqpaliaLGLVGGLYHLLNHSLFKSVLFLGAG 344
Cdd:MTH00210 280 ILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVM-----VCGI---------SNYSTSLFHLMNHAFFKALLFLSAG 345
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 16130630 345 SVWFRTG-HRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00210 346 SVIHAVSdEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
109-487 |
2.02e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.24 E-value: 2.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 109 LQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFL--TSNSKE---GKLWFALGRLGTLLLA-IACWLLWQRY------ 176
Cdd:PRK08676 106 LGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLiaILSAREnidAALKYIFIASTAMIFAfIGLIFLFSLTrqalgt 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 177 GTLDLRLLDMRMQQLPLGSDI--WLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGN 254
Cdd:PRK08676 186 GTLNWTELAAHASLLSPSVLGasFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQ 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 255 APLW--WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeqpaliALGLVGGLYHLLNH 332
Cdd:PRK08676 266 SGAAeqFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGT-----------PLALFWMLFHMLAH 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 333 SLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEwviyqsFFKLSNSGAfvarlL 412
Cdd:PRK08676 335 SLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSK------FFILLQLGG-----I 403
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130630 413 GPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVA-LAICCVIGGVAAPWLLPMLSAAV 487
Cdd:PRK08676 404 SVWLVLAVLLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRTPLSMKLPIVIiLALVLALGVYFPPGLADFLDQIV 479
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
155-488 |
2.26e-10 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 63.30 E-value: 2.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 155 FALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLG----VIGFGLLAGIIPLHGWVPQAHANASAPAA 230
Cdd:PRK05777 160 FVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGlvflLVGLAFKLSAVPFHMWTPDVYEGAPTPVT 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 231 ALFSTVVmKIGLLGILT--LSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVT 308
Cdd:PRK05777 240 AFLATAP-KIAAFAVLLrlLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTA 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 309 gialeqpaliaLGLVGGLYHLLNHsLFKSVLFLGAGSVWFRTGHR--DIEKLGGIGKKMPVISIAMLVGLMAMAALPPLN 386
Cdd:PRK05777 319 -----------EGYSAVLFYLLAY-LFMTLGAFGVISLLRRKGGEaeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 387 GFAGEWVIYQSFFklsNSGAFVarllgplLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALA 466
Cdd:PRK05777 387 GFWGKFYVFEAAV---EAGLWW-------LAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLSVSALL 456
|
330 340
....*....|....*....|..
gi 16130630 467 IccVIGGVAAPWLLPMLSAAVP 488
Cdd:PRK05777 457 V--LVLGIFPQPLLDLAAQAIP 476
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
254-388 |
4.37e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 62.68 E-value: 4.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 254 NAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPALialglvgGLYHLLNHS 333
Cdd:MTH00208 294 SNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLM-------VVAIGLNQPNL-------ALFHICTHA 359
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 334 LFKSVLFLGAGSVWfrtgH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00208 360 FFKAMLFLCSGSII----HslnneQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGF 415
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
258-388 |
4.55e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 62.47 E-value: 4.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 258 WWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALeqpalialglvgglYHLLNHSLFKS 337
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAF--------------FHLLTHALFKA 306
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 16130630 338 VLFLGAGSVWFRT-GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00165 307 LLFLCAGSIIHNMsNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGF 358
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
113-394 |
2.32e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 59.66 E-value: 2.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 113 MLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSN------SKEGKL-WFALGRLGTLLLAIACWLLWQRYGTLDLRLLD 185
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQnrgsgySAEAGLkYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 186 MRMQQLPLGSDI-----WLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVmKIGLLGILTLSLLGGNAplwwg 260
Cdd:MTH00196 81 LVLNSGQSFSSVsvpigYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVP-KLGIFSILVSIGLNVNI----- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 261 iaLLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtGIALEQPALIALglvgGLYHLLNHSLFKSVLF 340
Cdd:MTH00196 155 --LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIG--SFESIQASLVYL----FIYIIMSICVFSIILA 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 16130630 341 LGagsvwfrTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 394
Cdd:MTH00196 227 LN-------VYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLI 273
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-480 |
3.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 59.36 E-value: 3.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 116 AAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGR-------LGTLLLAIACwllwqrygtldlrlldMRM 188
Cdd:PRK12664 74 ISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHyacvhffSGVLLLVGAS----------------GQA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 189 QQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILtlsllggnapLWWGIA--LLVL 266
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLL----------LFFSGEeiLLFL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 267 GMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgagvTGIALEQPALIALGLVggLYHLLNHSLFKSVLFLGAGSV 346
Cdd:PRK12664 208 GIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLI-------IAIGFSGSSGVAIGIL--ILQIVLSVVYQTLLFMVADSV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 347 WFRTGHRDIEKLGGIgKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSfFKLSNSGAFVARLLGPLLAVGLAITGAL 426
Cdd:PRK12664 279 INRTRKFNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHS-IDTAGLTLVLYKKLFLICSLLLFASVGL 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 16130630 427 avmcmaKVYGVTFLGAPRTKEAENATCAPLlmSVSVVALAICCVIGGVAAPWLL 480
Cdd:PRK12664 357 ------KFFWYAFISKSKSKPEAEKVYIGS--KLSMIILVLICVVLGMFNSYLL 402
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
161-402 |
2.49e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 56.61 E-value: 2.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 161 GTLLLAIACWLLWQRYGTLDLRLLdmRMQQLPLGSDIWLLGVIGFGLLAGI--IPLHGWVPQAHANASAPAAALFSTVVM 238
Cdd:MTH00204 175 GSVFMLLGIFQLYSITGTTDYQIL--LNIKLPLSIQKWLLVGFFLSLAVKIpqIPFHIWLPQAHVEAPVAGSVILAGILL 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 239 KIGLLGILTLSLLGG-NAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGialeqpal 317
Cdd:MTH00204 253 KLGGYGFLRFSWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIE-------- 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 318 ialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 397
Cdd:MTH00204 325 ---GLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLA 401
|
....*
gi 16130630 398 FFKLS 402
Cdd:MTH00204 402 AFEYS 406
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
263-382 |
9.80e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 54.92 E-value: 9.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 263 LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLG 342
Cdd:MTH00095 230 MLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVS--------------FIHLLSHALFKSCLFMQ 295
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 16130630 343 AG-SVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAAL 382
Cdd:MTH00095 296 VGyLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGL 336
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
264-388 |
6.41e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 52.55 E-value: 6.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 264 LVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgagVTgIALEQPALIALglvgglyHLLNHSLFKSVLFLGA 343
Cdd:MTH00108 278 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMM------VT-IGINQPHLAFL-------HICTHAFFKAMLFMCS 343
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 16130630 344 GSVWfrtgH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00108 344 GSII----HnlndeQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGF 389
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
160-399 |
1.49e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.08 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWL-LGV-IGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 237
Cdd:MTH00226 193 IGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQTQKWIfLGIfLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 238 MKIGLLGILTlsllggnapLWWGI----------ALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIIllglgagv 307
Cdd:MTH00226 273 LKLGGYGLVR---------LSWPIlplgaqnlapAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV-------- 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 308 tGIALEQPALIalGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNG 387
Cdd:MTH00226 336 -SITLVTHDII--GLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
250
....*....|..
gi 16130630 388 FAGEWVIYQSFF 399
Cdd:MTH00226 413 FIGEYLSILSSF 424
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
264-388 |
1.67e-06 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 50.93 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 264 LVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgagvTGIALEQPALIALglvgglyHLLNHSLFKSVLFLGA 343
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMM-------VTIGLNQPQLAFL-------HISTHAFFKAMLFLCS 342
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 16130630 344 GSVWFRT-GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00004 343 GSIIHNLnNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGF 388
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
264-388 |
7.00e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 49.14 E-value: 7.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 264 LVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgagVTgIALEQPALialglvgGLYHLLNHSLFKSVLFLGA 343
Cdd:MTH00066 275 LCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMM------VT-IGLNQPQL-------AFFHICTHAFFKAMLFLCS 340
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 16130630 344 GSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00066 341 GSIIHSlNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGF 386
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
160-476 |
3.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 46.77 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPlGSDIWLLGV------IGFGLLAGIIPLHGWVPQAHANASAPAAALF 233
Cdd:PRK12666 170 VASSLFLIGVGLIYGVTGTLNMADLAQRIAQLP-AADRALLEAgaalllVVFLIKAAMWPLNFWLPPAYAAASAPVAALF 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 234 ST-------VVMKIGLLGILTLSLLGGNAPLWWgiaLLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgag 306
Cdd:PRK12666 249 AImtkvgiyAILRLSTLLFGPEAGASAGFGQDW---LLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLL------ 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 307 vTGIALEQPALIAlglvGGLYHLLNHSLFKSVLFLGAGSVWFRTG-------------HRDIEKLGGIGKKMP----VIS 369
Cdd:PRK12666 320 -AAIGLGNPAATA----AALYYLVHSTLAAAALFLLADLVERQRGaaadrlavtpelyDLDEEEEEEVGVAIPatmaLLG 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 370 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVArLLGPLLAVGLAitgalAVMCMAKVyGVTFLGAPrtkEAE 449
Cdd:PRK12666 395 LLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWW-LWALVLLSGLA-----ALIALTRA-GIRLFWAS---HER 464
|
330 340
....*....|....*....|....*..
gi 16130630 450 NATCAPLLMSVSVVALAICCVIGGVAA 476
Cdd:PRK12666 465 PVPRLRVLELAPVAGLLALCVALTVFA 491
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
178-395 |
5.13e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 46.09 E-value: 5.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 178 TLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAP 256
Cdd:CHL00011 194 TLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAH 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 257 LWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGagvtgialeqpALIALGLVGGLYHLLNHSLFK 336
Cdd:CHL00011 274 SIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIG-----------SITDTGLNGAILQIISHGFIG 342
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 16130630 337 SVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIY 395
Cdd:CHL00011 343 AALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVF 401
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
160-402 |
6.50e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.81 E-value: 6.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 160 LGTLLLAIACWLLWQRYGTLDLRLLdmrmQQLPLGSDIWLLGVIGFGLLAGI----IPLHGWVPQAHANASAPAAALFST 235
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYAGTTDYQAL----CCLKIEKELQYFIFLGFFLSLAIkipkIPFHIWLPQAHVEAPVAGSVILAG 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 236 VVMKIGLLGIL-TLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGagvtgialeq 314
Cdd:MTH00217 247 VLLKLGGYGFIrFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIF---------- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 315 pALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 394
Cdd:MTH00217 317 -SHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLS 395
|
....*...
gi 16130630 395 YQSFFKLS 402
Cdd:MTH00217 396 LLAAFEYS 403
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
264-388 |
8.03e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 45.59 E-value: 8.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 264 LVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILlglgagVTgIALEQPALIALglvgglyHLLNHSLFKSVLFLGA 343
Cdd:MTH00137 283 LCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMM------VT-IGLNQPQLAFL-------HICTHAFFKAMLFLCS 348
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 16130630 344 GSVWfrtgH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 388
Cdd:MTH00137 349 GSII----HslndeQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGF 394
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
263-418 |
1.24e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 44.85 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 263 LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvTGIALEQPALIALglvggLYHLLNHSLFKSVLFLG 342
Cdd:MTH00198 359 LLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAG-TYESLQASWTYAV-----TYLVSALASFTVICTLE 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 343 AGSVWFRTGHRDIEKLGG------------IGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVAR 410
Cdd:MTH00198 433 EFGTRTPTSRQRDGSFGNynlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIY 512
|
....*...
gi 16130630 411 LLGPLLAV 418
Cdd:MTH00198 513 YLVALFAI 520
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
259-390 |
1.29e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 44.99 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVT--GIAleqpALIALGLVgglYHLLNHSLFK 336
Cdd:CHL00049 279 WHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSndGYA----SMITYMLF---YIFMNLGTFA 351
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 16130630 337 SVLFLGagsvwFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAG 390
Cdd:CHL00049 352 CIVLFG-----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
320-424 |
2.83e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 43.77 E-value: 2.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 320 LGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 399
Cdd:MTH00206 303 WGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLF 382
|
90 100
....*....|....*....|....*
gi 16130630 400 KLSNsgafvarLLGPLLAVGLAITG 424
Cdd:MTH00206 383 SWSN-------FTLPLLGLGFLFTA 400
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
263-397 |
2.86e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.85 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 263 LLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGvtGIALEQPALIALGLvgglYHLLNHSLFKSVLFLG 342
Cdd:MTH00199 250 VLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIG--SFESIQASLIYMII----YVIMSICSFSIILSLK 323
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 16130630 343 AGSVWfrtghrdIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 397
Cdd:MTH00199 324 LTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLS 371
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
109-402 |
1.44e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 41.48 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 109 LQINMLMAAAVCAVIasnlgMFVVMAE---IMALCAVFLTSNSKE----GKLWFALGRLGTLLLAIACWLLWQRYGTLDL 181
Cdd:MTH00127 103 LQIFLILAFGATEII-----MFYVMFEatlIPTLIIITRWGNQTErlnaGTYFLFYTLAGSLPLLVALLLLQNSTGTLSM 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 182 RLLDMR--MQQLPLGSDIWLLG-VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLW 258
Cdd:MTH00127 178 LTLQYSqpLQLSSWADKLWWAGcLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKE 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSV 338
Cdd:MTH00127 258 LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLV-------AGGILIQTP----WGFTGALILMIAHGLTSSA 326
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130630 339 LFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLS 402
Cdd:MTH00127 327 LFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWS 390
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
259-418 |
1.85e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 41.19 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 259 WGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVtgialeQPALIALGLVGGLYHLLNHSLFKSV 338
Cdd:PRK02504 275 WKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGT------EAGYASMVFYLLAYLFMNLGAFACV 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 339 LFLGagsvwFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEwvIYQsFFKLSNSGAFVARLLGPLLAV 418
Cdd:PRK02504 349 ILFS-----LRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK--IYL-FWAGWQAGLYLLVLVGLVTSV 420
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
213-385 |
2.12e-03 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 41.03 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 213 PLHGWVPQAH-------------------ANASAPAAALFSTV--VMKIgllgiltlsllggnaplwwgIALlvLGMITA 271
Cdd:CHL00025 245 PLHVWLPDAMegptpisalihaatmvaagIFLVARLLPLFIVIpyIMNL--------------------ISL--IGIITA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130630 272 FVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWfrtg 351
Cdd:CHL00025 303 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAA--------------LFHLITHAYSKALLFLGSGSVI---- 364
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 16130630 352 HrDIEKL--------------GGIGKKMPVISIAMLVGLMAMAALPPL 385
Cdd:CHL00025 365 H-SMEPIvgyspdksqnmvlmGGLRKYMPITKTTFLLGTLSLCGIPPL 411
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
364-403 |
8.13e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 38.67 E-value: 8.13e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 16130630 364 KMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSN 403
Cdd:MTH00105 236 KTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNN 275
|
|
| |
