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Conserved domains on  [gi|16130898|ref|NP_417472|]
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DUF2623 domain-containing protein YghW [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

DUF2623 domain-containing protein( domain architecture ID 10567500)

DUF2623 domain-containing protein similar to Escherichia coli uncharacterized protein YghW

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2623 pfam11115
Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae ...
 1-93 1.65e-58

Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae family. Several members are named as YghW. The function is not known.


:

Pssm-ID: 431663  Cd Length: 93  Bit Score: 174.24  E-value: 1.65e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130898    1 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNS 80
Cdd:pfam11115  1 MGNHFGKGLLAGLQASNPDSANDINPYCADYRRGYVCGYAHRMAEKTGDRQQAAFEAGILTRRYGLDREMVAEFFTEQGN 80

                         90
                 ....*....|...
gi 16130898   81 CSTLRFFMAGYRL 93
Cdd:pfam11115 81 PSAIRFFYAGYRL 93
 
Name Accession Description Interval E-value
DUF2623 pfam11115
Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae ...
 1-93 1.65e-58

Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae family. Several members are named as YghW. The function is not known.


Pssm-ID: 431663  Cd Length: 93  Bit Score: 174.24  E-value: 1.65e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130898    1 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNS 80
Cdd:pfam11115  1 MGNHFGKGLLAGLQASNPDSANDINPYCADYRRGYVCGYAHRMAEKTGDRQQAAFEAGILTRRYGLDREMVAEFFTEQGN 80

                         90
                 ....*....|...
gi 16130898   81 CSTLRFFMAGYRL 93
Cdd:pfam11115 81 PSAIRFFYAGYRL 93
 
Name Accession Description Interval E-value
DUF2623 pfam11115
Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae ...
 1-93 1.65e-58

Protein of unknown function (DUF2623); This family is conserved in the Enterobacteriaceae family. Several members are named as YghW. The function is not known.


Pssm-ID: 431663  Cd Length: 93  Bit Score: 174.24  E-value: 1.65e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130898    1 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNS 80
Cdd:pfam11115  1 MGNHFGKGLLAGLQASNPDSANDINPYCADYRRGYVCGYAHRMAEKTGDRQQAAFEAGILTRRYGLDREMVAEFFTEQGN 80

                         90
                 ....*....|...
gi 16130898   81 CSTLRFFMAGYRL 93
Cdd:pfam11115 81 PSAIRFFYAGYRL 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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