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Conserved domains on  [gi|16130939|ref|NP_417515|]
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putative fimbrial protein YgiL [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

fimbrial-like protein( domain architecture ID 10013327)

fimbrial-like protein similar to Escherichia coli fimbrial-like protein YgiL

Gene Ontology:  GO:0043709

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


:

Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733  81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                        170       180
                 ....*....|....*....|.
gi 16130939  163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733 161 PSKDATPGNVYAQADYKIAYE 181
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733  81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                        170       180
                 ....*....|....*....|.
gi 16130939  163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733 161 PSKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-183 7.42e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.54  E-value: 7.42e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   5 KKSLLVAGVAMILSNNVfADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSD-QKSLAEPFTIHLQDCmls 83
Cdd:COG3539   2 KKLLLALLLALALSAAA-AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVgSTSGPKPFSIKLTNC--- 77

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939  84 qGGTTYSKAKVTFTtANTMTGQSDLLKNTketEIGGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQeLNFKARMES 162
Cdd:COG3539  78 -DAGTSNSVKVTFT-GTADSANPGLLANT---GSGGASGVGIQLLDSDGTPIPLGTPSsAVTLTSNGSAT-LPFYARYVA 151

                       170       180
                ....*....|....*....|.
gi 16130939 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:COG3539 152 TGATVTAGSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
30-183 4.21e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.61  E-value: 4.21e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    30 VKFKGEVIS--APCSIKPGDEDlTVNLGEVADTVLKSDQKSLAE-PFTIHLQdCmlsQGGTTYSKAKVTFTTaNTMTGQS 106
Cdd:pfam00419   1 INFTGTVTRvpATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQkPFSITLE-C---SSGSSAVKVTVGLFG-TADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   107 DLLKNTKETeiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQE--LNFKARMESPSKDA-TPGNVYAQADYKIAYE 183
Cdd:pfam00419  75 NLLLTGNGA--GAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVAtgITFTASLVATTGGTpTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-183 2.30e-117

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 329.99  E-value: 2.30e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    3 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCML 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   83 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 162
Cdd:PRK09733  81 SQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMES 160

                        170       180
                 ....*....|....*....|.
gi 16130939  163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK09733 161 PSKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-183 7.42e-39

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 130.54  E-value: 7.42e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   5 KKSLLVAGVAMILSNNVfADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSD-QKSLAEPFTIHLQDCmls 83
Cdd:COG3539   2 KKLLLALLLALALSAAA-AAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVgSTSGPKPFSIKLTNC--- 77

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939  84 qGGTTYSKAKVTFTtANTMTGQSDLLKNTketEIGGATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQeLNFKARMES 162
Cdd:COG3539  78 -DAGTSNSVKVTFT-GTADSANPGLLANT---GSGGASGVGIQLLDSDGTPIPLGTPSsAVTLTSNGSAT-LPFYARYVA 151

                       170       180
                ....*....|....*....|.
gi 16130939 163 PSKDATPGNVYAQADYKIAYE 183
Cdd:COG3539 152 TGATVTAGSFNATATFTIDYQ 172
PRK15210 PRK15210
fimbrial protein;
8-182 5.70e-19

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 80.13  E-value: 5.70e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    8 LLVAGVAMILSNNVFADE--------GHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQ 78
Cdd:PRK15210   7 LAMAAAGMMYGASVFAADttptagpfGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTaDATTESKPFTIHLQ 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   79 DCMLSQGGTT-------YSKAKVTFTTANTMTGQSdllkntkETEIGGATGVGVRILDSQSGE-VTLGTPV-------VI 143
Cdd:PRK15210  87 NCAFDPNIPDtagsagkMSKVTVSFSGTANTSKKA-------YTTSGSAQHVGVQLLKSDNTSiIEPNTPMpdgdaqqLQ 159

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 16130939  144 TFNNtnsyqELNFKARMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15210 160 AGNN-----ELNFFARLIALDNGVTPGDFNASVTYTLKY 193
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 5-183 8.03e-18

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 76.55  E-value: 8.03e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQDCML 82
Cdd:PRK15209   2 KKVVFALSALALTSTSVFAaESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAiGDKSSAKPFQIKLEDCDI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   83 sqggTTYSKAKVTFTTANTmTGQSDLLknTKETEIGGATGVGVRILDSQSGEVTLGT---PVVITFNNTNSYqelnFKAR 159
Cdd:PRK15209  82 ----TTNKKVNVSFNGVGD-ADDSTLV--SVSTEAGAATGVGIGIYDNANTLVELNTgksTTTLAAGQTVLY----FTAN 150

                        170       180
                 ....*....|....*....|....
gi 16130939  160 MESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15209 151 YVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-183 2.47e-16

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 72.68  E-value: 2.47e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    1 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEV-ADTVLKSDQKSLAEPFTIHLQD 79
Cdd:PRK15194   6 ISSAIASLLFVAGAAYAADPTPVSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYrTAIFTAVGNTTALIPFTIQLND 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   80 CmlsqggttysKAKVTFTTANTMTGQSD-----LLKNTKETEIGGATGVGVRILDSQSGEVtlgTPVVITFNNTNSYQE- 153
Cdd:PRK15194  86 C----------DPVVAATAAVAFSGQADatndnLLAVASSTNTTTATGVGIEILDNTSSIL---KPDGATFSANQNLIEg 152

                        170       180       190
                 ....*....|....*....|....*....|...
gi 16130939  154 ---LNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15194 153 tntLHFSARYKATGTSASAGQANADATFIMKYE 185
Fimbrial pfam00419
Fimbrial protein;
30-183 4.21e-13

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 63.61  E-value: 4.21e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    30 VKFKGEVIS--APCSIKPGDEDlTVNLGEVADTVLKSDQKSLAE-PFTIHLQdCmlsQGGTTYSKAKVTFTTaNTMTGQS 106
Cdd:pfam00419   1 INFTGTVTRvpATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQkPFSITLE-C---SSGSSAVKVTVGLFG-TADASSP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   107 DLLKNTKETeiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQE--LNFKARMESPSKDA-TPGNVYAQADYKIAYE 183
Cdd:pfam00419  75 NLLLTGNGA--GAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVAtgITFTASLVATTGGTpTAGDFNATATIVVDYQ 152
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 28-183 1.52e-10

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 57.17  E-value: 1.52e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   28 GIVKFKGEVISAPCSIKpgDEDLTVNLGEVadtVLKSDQKSLAE----PFTIHLQDCmlsqggTTYSKAKVTfttantMT 103
Cdd:PRK15205  30 GDIHFTITIKAKACELE--KDSLEVDMGTM---VLQKPVKVGTElnqkNFSIGLKDC------DGISKASVT------MD 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939  104 GQSDLLKNTK-ETEIGGATGVGVRILDS----QSGEVTLGTPVVITFNNTNSYQeLNFKARMESPSKDATPGNVYAQADY 178
Cdd:PRK15205  93 GSPDPDDPSLfALDAGGATGVALKIKTSkgtqQYPKSTDGTPVEWAINGDGTTQ-LNYIASYVPVNADATVGTANATVNF 171


                 ....*
gi 16130939  179 KIAYE 183
Cdd:PRK15205 172 SVTYE 176
lpfA PRK15289
fimbrial protein; Provisional
 5-183 2.26e-10

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 56.89  E-value: 2.26e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAM---ILSNNVFADEGhgIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLkSDQKSLAEP--FTIHLQD 79
Cdd:PRK15289   2 KRNIIGGAFTLaslMLAGHALAEDG--VVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAF-SGVGSLASPqkFSIKLEN 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   80 CmlsqgGTTYSKAKVTFTTANTMTGQSDLLKNTKET-----------EIGGATGVGVRILD-SQSGEVTLGTPVVITFNN 147
Cdd:PRK15289  79 C-----PATYTQAAVRFDGTEAPGGDGDLKVGTPLTagnpgdftgtgQAIAATGVGIRIFNqSDNSQVKLYNDSAYTAID 153

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 16130939  148 TNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15289 154 AEGKAEMKFIARYVATNATVTAGTANADSQFTVEYK 189
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 6-183 4.86e-10

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 55.88  E-value: 4.86e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    6 KSLLVAGVAMILSNNvfADEGH-GIVKFKGEVISAPCSIKPGDEDLTVNLGEVAD-TVLKSDQKSLAEPFTIHLQDCmls 83
Cdd:PRK15191   2 RNDILYGIGMLLAAS--GVQAHdGRVYVSGTITDNTCSLSPGSENINVAMGAVSQrQFYRAGDGSAWQPFAIDLQNC--- 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   84 qgGTTYSKAKVTFTTANTMTGQSDLLKNTKETEiggATGVGVRILDSQSGEVTLGTPV-VITFNNTNSYQELNFKARMES 162
Cdd:PRK15191  77 --GSTASGVTVSFSGAADSRNTDLLALTAGESD---ASGIGIALYDQNKTLIPLGQESdVVTLSPGQASAHLQFYARYLA 151

                        170       180
                 ....*....|....*....|.
gi 16130939  163 PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15191 152 DGGAVTPGDANASATFILAYE 172
PRK15296 PRK15296
fimbrial protein SthA;
5-183 1.41e-08

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 52.02  E-value: 1.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAMILSNNVFAdegHGIVKFKGEVISAPCSIK-PGDEDLTVNLGE-VADTVLKSDQKSLAEPFTIHLQDCML 82
Cdd:PRK15296   4 KKIIILAMLTAVASTPVFA---QNTITFNGKIYDQACTVQvNGSTDTTIDLGNySKERIAEKGATTDYVPFTVSLVSCPE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   83 SQGGTTySKAKVTFTTAnTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGT-PVVITFNNTNSYQELNFKARME 161
Cdd:PRK15296  81 AGTGVP-TQAMFRFHGA-TDDSNPTYFKNADEGSETGAAGVGISIQNASHSDVTDNTdDAAVNLPTDGSTADFTYYAAMA 158

                        170       180
                 ....*....|....*....|...
gi 16130939  162 SP-SKDATPGNVYAQADYKIAYE 183
Cdd:PRK15296 159 NDgSATVTGGDVSTQVTYTVSYQ 181
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 2-182 6.48e-07

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 47.46  E-value: 6.48e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    2 SAFKKSLLVAGVAM-ILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLG-EVADTVLKSDQKSL--AEPFTIHL 77
Cdd:PRK15261   4 SHFCKLAVTASLVMgIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGsSIGNGTLSNGKTTInnARTFHIDL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   78 QDCMLSqggtTYSKAKVTFTTAN---TMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLG---TPVVITFNNT--- 148
Cdd:PRK15261  84 EGCTWA----TEKNMNVVFTTGSgttAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGdtyTQAIADLDGDtil 159

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 16130939  149 NSYQELNFKARMESPSKDAT-PGNVYAQADYKIAY 182
Cdd:PRK15261 160 DEKQSLNFTAWLVGAATGTVgTGEFSSAANVTISY 194
PRK15283 PRK15283
fimbrial major subunit StfA;
2-182 7.49e-07

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 47.07  E-value: 7.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    2 SAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 81
Cdd:PRK15283   3 TAVKAAVAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLENCA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   82 LsqggTTYSKAKVTFTT----ANTMTGQSDLLK------NTKETEIGGATGVGVRILDSQSGEVTLGTPVVItfnntnSY 151
Cdd:PRK15283  83 F----TTEKEASTVFSAigneSSANPGSVALMRigggemAGSSIVIGNHLGSAIKLGDAYSENLTMNGSVAA------AK 152

                        170       180       190
                 ....*....|....*....|....*....|...
gi 16130939  152 QELNFKARMESPSKDAT--PGNVYAQADYKIAY 182
Cdd:PRK15283 153 QTLNFKAWVKGDSAASTidTGEFSSTVNFTISY 185
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 6-182 5.64e-06

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 44.70  E-value: 5.64e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    6 KSLLVAGVAMILSNNVFADEGH-GIVKFKGEVISAPCSIKPGDEDLTVNlGEVADTVLKSDQKSLAEPFTIHLQDCmlsq 84
Cdd:PRK15300   6 KTLTVALAAITLSPAALADTAKdGTVHITGLIKQNACTVKTDSVEVTLQ-EEFASLFTAAGQTAGDTDFTIELENC---- 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   85 GGTTYSKAKVTFTtaNTMTG-QSDLLKNTketeiGGATGVGVRILDSQSGEVTL------GTPVVITFNNTNSYQELNFK 157
Cdd:PRK15300  81 DANVYSSVQARFE--GTLDGtDATILKNE-----DDAENIGVQILDKTSTPMTFndlqawSAAVALPTAEGVTELSMPFT 153

                        170       180
                 ....*....|....*....|....*
gi 16130939  158 ARMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15300 154 ARYIATAVPVKSGTVDATATFYLQY 178
PRK09934 PRK09934
fimbriae assembly protein;
5-182 2.32e-05

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 42.57  E-value: 2.32e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAMILSNNVFADEGHGIV--KFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCm 81
Cdd:PRK09934   2 RRVFFACFCGLLWSPLSWAADPLGEIniELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLnAGDTTQPVPFSLKLEGC- 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   82 lsqggtTYSKAKVTFTtaNTMTGQSDLLKNTKETEiggATGVGVRILDSQSGEVTLG--TPVVITFNNTNSyqELNFKAR 159
Cdd:PRK09934  81 ------PPGSASITFT--GTPASDTNLLALDDPAM---AQTVAIEIRDSDRSRLALGqaSPTVEVDANGNA--TLNFYAN 147

                        170       180
                 ....*....|....*....|...
gi 16130939  160 MESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK09934 148 YIALADGVQPGVAKADATFMINY 170
PRK15262 PRK15262
putative fimbrial protein StaF; Provisional
 4-183 3.61e-05

putative fimbrial protein StaF; Provisional


Pssm-ID: 237933  Cd Length: 197  Bit Score: 42.37  E-value: 3.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    4 FKKSLLVAGVAMILSNNVFADeGHGiVKFKGEVISAPCSIK---PGDEDL-TVNLGEVADTVLKSDQKSLAEPFTIHLQD 79
Cdd:PRK15262   6 MKKIILFLGLLFALTSPPAYA-GQD-VDLTANIKNSTCQSGisnNGNVDLgTVGVGYFADNVTAETYYPGGKEFTITVVD 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   80 CMLSQGGTTYSKAKVTFT--TANTMTGQSDLLKNtkETEIGGATGVGVRILDSQSGEVT---LGT--------PVVITFN 146
Cdd:PRK15262  84 CALQGTGSVLNQLHFDFRpqSGVMATGSQQIFAN--EAVAGGAKNVGVVIFSIQDPANTfnvLNSdgssrsvyPVMTSAL 161

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 16130939  147 NTNSYQelnFKARMES--PSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15262 162 NNSSWK---FYARMQKidPALDVTSGQVTSHVLVDVYYE 197
PRK15239 PRK15239
putative fimbrial protein StaA; Provisional
 5-183 1.85e-04

putative fimbrial protein StaA; Provisional


Pssm-ID: 185152  Cd Length: 197  Bit Score: 40.48  E-value: 1.85e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAMIL-SNNVFADEGhGIVKFKGEVISAPC----------SIKPGDEDL-TVNLGEVADTVLKSDQKSLAEP 72
Cdd:PRK15239   2 KKVLLATAVFMALgSSSVMAVEG-GRINFEGLVSAETCkkvvssavgnSNIDGTVTLkTAHVSDVTAEVQNSTAGVNAED 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   73 FTIHLqDCmlSQGGTTYSKAKVTFTTA-NTMTGQSDLLKNTKETEIGGATGVGVRILD----SQSGEVTLGTPVVITFNN 147
Cdd:PRK15239  81 FSIII-DC--SDAGAGLVKSHLTMSSSfSNTKGTLDNDETLTRSGIEAAKAVDIAVHHvddaNALSLVKINDPSNTMEES 157

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 16130939  148 -TNSYQELNFKA---RMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15239 158 fTNGIATYNFKAsyvKSSDAGASVTTGLVSTNAIYTFTYE 197
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
5-182 1.86e-04

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 40.22  E-value: 1.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    5 KKSLLVAGVAM---ILSNNVFADEGHgiVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLkSDQKSLAE---PFTIHLQ 78
Cdd:PRK15200   3 RKGAALVGLVLmspVIAQPVMVESGR--VHLRGQLVNGGCAVATESQDLRVLMGQYRTNAF-TGPGSFAPvsvPFSLRLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   79 DCmlsqGGTTYSKAKVTFTTAnTMTGQSDLLKNTKETEigGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKA 158
Cdd:PRK15200  80 SC----SAEVWRHVGIAFAGV-TPAEDPHVFLASGEGI--GNAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTA 152

                        170       180
                 ....*....|....*....|....
gi 16130939  159 RMESPSKDATPGNVYAQADYKIAY 182
Cdd:PRK15200 153 RYRAISENMTPGRIHSEVWFTLVY 176
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 1-183 2.94e-04

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 39.68  E-value: 2.94e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939    1 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLA-EPFTIHLQD 79
Cdd:PRK15190   1 MNRSHCALFAMGLMLCPQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKfKPFNINLKN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   80 CMLSQGGttyskAKVTFTtantmtGQSD----LLKNTKETEIGG----ATGVGVRILDSQSGEVTLGTPVVITFNNTNSY 151
Cdd:PRK15190  81 CSRGIAG-----AKIWFT------GEPDpdnpALLAITDTGMGSgnmlASGVGVEILNDDQDTISINNADSVVYPLKAGR 149

                        170       180       190
                 ....*....|....*....|....*....|..
gi 16130939  152 QELNFKARMESPSKDATPGNVYAQADYKIAYE 183
Cdd:PRK15190 150 NTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 28-182 1.51e-03

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 37.88  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939   28 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-----SDQKslaEPFTIHLQDCmlsqgGTTYSKAKVTFTTANTM 102
Cdd:PRK15187  32 GTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTeagmvANQK---EDFTIKLEDC-----DTQTSQNAAVIFNGQQD 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130939  103 TGQSDLLKNTKETeiGGATGVGVRILDSQSGEVTLG-TPVVITFNNTNSYQELNFKArmeSPSKDATPGNVYAQADYKIA 181
Cdd:PRK15187 104 ANQPGSLANTAGA--GSATNVALQLYGPDGQALNIGeSSSTVTLNDGENVIPLSVDY---IATGTATAGNVTATATFSMV 178


                 .
gi 16130939  182 Y 182
Cdd:PRK15187 179 Y 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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