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Conserved domains on  [gi|16131042|ref|NP_417619|]
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division and outer membrane stress-associated lipid-binding lipoprotein [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

divisome-associated lipoprotein YraP( domain architecture ID 11485150)

divisome-associated lipoprotein YraP such as Salmonella enterica YraP that contributes to cell envelope integrity and virulence

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11023 PRK11023
divisome-associated lipoprotein YraP;
1-191 7.57e-114

divisome-associated lipoprotein YraP;


:

Pssm-ID: 182907 [Multi-domain]  Cd Length: 191  Bit Score: 322.00  E-value: 7.57e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042    1 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL 80
Cdd:PRK11023   1 MKALSPLAVLLSALLLQGCVAAAVVGTAAVATKAATDPRTVGTQVDDGTLELRVNNALSKDEQIKKEARINVTAYQGKVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042   81 LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG 160
Cdd:PRK11023  81 LTGQSPNAELSERAKQIAMGVEGVNEVYNEIRQGQPIGLGTASKDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG 160
                        170       180       190
                 ....*....|....*....|....*....|.
gi 16131042  161 LVTEREAKAAADIASRVSGVKRVTTAFTFIK 191
Cdd:PRK11023 161 LVTQREAKAAADIASRVSGVKRVTTAFTYLK 191
 
Name Accession Description Interval E-value
PRK11023 PRK11023
divisome-associated lipoprotein YraP;
1-191 7.57e-114

divisome-associated lipoprotein YraP;


Pssm-ID: 182907 [Multi-domain]  Cd Length: 191  Bit Score: 322.00  E-value: 7.57e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042    1 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL 80
Cdd:PRK11023   1 MKALSPLAVLLSALLLQGCVAAAVVGTAAVATKAATDPRTVGTQVDDGTLELRVNNALSKDEQIKKEARINVTAYQGKVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042   81 LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG 160
Cdd:PRK11023  81 LTGQSPNAELSERAKQIAMGVEGVNEVYNEIRQGQPIGLGTASKDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG 160
                        170       180       190
                 ....*....|....*....|....*....|.
gi 16131042  161 LVTEREAKAAADIASRVSGVKRVTTAFTFIK 191
Cdd:PRK11023 161 LVTQREAKAAADIASRVSGVKRVTTAFTYLK 191
OsmY COG2823
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
33-188 3.46e-53

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 167.15  E-value: 3.46e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042  33 KAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKkEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIR 112
Cdd:COG2823   6 AVATDRRTTGTQVDDATIEAKVKAALLADPGLD-AADINVTVYNGVVTLTGQVPSEAEKDRAEEIARGVPGVKSVVNELR 84
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16131042 113 QGQPiglgEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFT 188
Cdd:COG2823  85 VGPP----SRSNDTWITTKVKAALLADKDVPSTNIKVVTENGVVYLMGLVTQAEADAAAEIARNVSGVKKVVNLFE 156
BON pfam04972
BON domain; This domain is found in a family of osmotic shock protection proteins. It is also ...
124-188 1.29e-14

BON domain; This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.


Pssm-ID: 428229 [Multi-domain]  Cd Length: 69  Bit Score: 65.32  E-value: 1.29e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16131042   124 NDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLV-TEREAKAAADIASRVSGVKRVTTAFT 188
Cdd:pfam04972   1 DDADIAAKVKAALAKDPGLDAADINVTVENGVVTLSGTVpSEAEKEKAEEIARNVAGVKKVVNQLT 66
BON smart00749
bacterial OsmY and nodulation domain;
53-112 3.33e-07

bacterial OsmY and nodulation domain;


Pssm-ID: 197856 [Multi-domain]  Cd Length: 61  Bit Score: 45.76  E-value: 3.33e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042     53 RVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIR 112
Cdd:smart00749   2 KVKKALAKDGLIKADSIVVVTDGGVVVLLGGVVDNAEAAAAAAAAAVVGGVKVVVVNLLI 61
 
Name Accession Description Interval E-value
PRK11023 PRK11023
divisome-associated lipoprotein YraP;
1-191 7.57e-114

divisome-associated lipoprotein YraP;


Pssm-ID: 182907 [Multi-domain]  Cd Length: 191  Bit Score: 322.00  E-value: 7.57e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042    1 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVL 80
Cdd:PRK11023   1 MKALSPLAVLLSALLLQGCVAAAVVGTAAVATKAATDPRTVGTQVDDGTLELRVNNALSKDEQIKKEARINVTAYQGKVL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042   81 LVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG 160
Cdd:PRK11023  81 LTGQSPNAELSERAKQIAMGVEGVNEVYNEIRQGQPIGLGTASKDTWITTKVRSQLLTSDSVKSSNVKVTTENGEVFLLG 160
                        170       180       190
                 ....*....|....*....|....*....|.
gi 16131042  161 LVTEREAKAAADIASRVSGVKRVTTAFTFIK 191
Cdd:PRK11023 161 LVTQREAKAAADIASRVSGVKRVTTAFTYLK 191
OsmY COG2823
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
33-188 3.46e-53

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 167.15  E-value: 3.46e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042  33 KAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKkEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIR 112
Cdd:COG2823   6 AVATDRRTTGTQVDDATIEAKVKAALLADPGLD-AADINVTVYNGVVTLTGQVPSEAEKDRAEEIARGVPGVKSVVNELR 84
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16131042 113 QGQPiglgEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFT 188
Cdd:COG2823  85 VGPP----SRSNDTWITTKVKAALLADKDVPSTNIKVVTENGVVYLMGLVTQAEADAAAEIARNVSGVKKVVNLFE 156
PRK10568 PRK10568
molecular chaperone OsmY;
41-188 7.67e-19

molecular chaperone OsmY;


Pssm-ID: 182556 [Multi-domain]  Cd Length: 203  Bit Score: 80.21  E-value: 7.67e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042   41 VGTQVDDGTLEVRVNSALSKDEQIKkEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNE--IRQGQPIG 118
Cdd:PRK10568  52 VGNFMDDSAITAKVKAALVDHDNIK-STDISVKTHQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKlhVRDAKEQS 130
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131042  119 LGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLV-TEREAKAAADIASRVSGVKRVTTAFT 188
Cdd:PRK10568 131 VKGYAGDTATTSEIKAKLLADDIVPSRKVKVETTDGVVQLSGTVdSQAQSDRAESIAKAVDGVKSVKNDLK 201
BON pfam04972
BON domain; This domain is found in a family of osmotic shock protection proteins. It is also ...
124-188 1.29e-14

BON domain; This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.


Pssm-ID: 428229 [Multi-domain]  Cd Length: 69  Bit Score: 65.32  E-value: 1.29e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16131042   124 NDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLV-TEREAKAAADIASRVSGVKRVTTAFT 188
Cdd:pfam04972   1 DDADIAAKVKAALAKDPGLDAADINVTVENGVVTLSGTVpSEAEKEKAEEIARNVAGVKKVVNQLT 66
BON pfam04972
BON domain; This domain is found in a family of osmotic shock protection proteins. It is also ...
46-115 5.37e-11

BON domain; This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.


Pssm-ID: 428229 [Multi-domain]  Cd Length: 69  Bit Score: 56.07  E-value: 5.37e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042    46 DDGTLEVRVNSALSKDeQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQ 115
Cdd:pfam04972   1 DDADIAAKVKAALAKD-PGLDAADINVTVENGVVTLSGTVPSEAEKEKAEEIARNVAGVKKVVNQLTVAP 69
BON smart00749
bacterial OsmY and nodulation domain;
53-112 3.33e-07

bacterial OsmY and nodulation domain;


Pssm-ID: 197856 [Multi-domain]  Cd Length: 61  Bit Score: 45.76  E-value: 3.33e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131042     53 RVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIR 112
Cdd:smart00749   2 KVKKALAKDGLIKADSIVVVTDGGVVVLLGGVVDNAEAAAAAAAAAVVGGVKVVVVNLLI 61
BON smart00749
bacterial OsmY and nodulation domain;
130-190 7.91e-05

bacterial OsmY and nodulation domain;


Pssm-ID: 197856 [Multi-domain]  Cd Length: 61  Bit Score: 39.21  E-value: 7.91e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131042    130 TKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFI 190
Cdd:smart00749   1 EKVKKALAKDGLIKADSIVVVTDGGVVVLLGGVVDNAEAAAAAAAAAVVGGVKVVVVNLLI 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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