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Conserved domains on  [gi|16131130|ref|NP_417707|]
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aromatic carboxylic acid efflux pump subunit AaeB [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

p-hydroxybenzoic acid efflux pump subunit AaeB( domain architecture ID 10013586)

p-hydroxybenzoic acid efflux pump subunit AaeB forms an efflux pump together with AaeA, acting on hydroxylated aromatic carboxylic acids

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10631 PRK10631
p-hydroxybenzoic acid efflux subunit AaeB; Provisional
3-654 0e+00

p-hydroxybenzoic acid efflux subunit AaeB; Provisional


:

Pssm-ID: 182600  Cd Length: 652  Bit Score: 1316.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    3 IFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGL 82
Cdd:PRK10631   1 IFSIANQRLRFAVKLAFAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPFSGAIRYRGMLRIIGTFIGCIAAL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   83 VIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIM 162
Cdd:PRK10631  81 VIIIATIRAPLLMILLCCIWAGFCTWISSLVRVENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  163 ADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAIN 242
Cdd:PRK10631 161 ADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDKEEVDKAWGDLVRRTTALNGMRSNLMMESSRWQRANRRLKALN 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  243 TLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKR 322
Cdd:PRK10631 241 TLSLTLITQACETYLIQNTRPELITDTFRELFDTPVETPQDVHKQLKRLRRVIAWTGERETPVTIYSWVGAATRYLLLKK 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  323 GVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 402
Cdd:PRK10631 321 GVISNTKISATEEEILQGEPVVKVESAERHHAMINGWRTTLATALGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  403 VAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQF 482
Cdd:PRK10631 401 VAIDFLYGTLAALPLGALYFMVIIPNTQQSMLLLCISLGVLGFFIGIEVQKRRLGSLGALASTINILVLDNPMTFHFSQF 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  483 LDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRL 562
Cdd:PRK10631 481 LDSALGQIVGCFLALIVILLVRDNSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLLNKFPGDIPKYRL 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  563 ALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVNRLA 642
Cdd:PRK10631 561 ALTLIIAHQRLRDAPIPVNEDLSAFHRQLRRTADHVISARSDDKRRRYFGQLLEELDIYQEKLRIWQAPPQVTEPVKRLT 640
                        650
                 ....*....|..
gi 16131130  643 GMLHKYQHALTD 654
Cdd:PRK10631 641 GMLHKYQHALTD 652
 
Name Accession Description Interval E-value
PRK10631 PRK10631
p-hydroxybenzoic acid efflux subunit AaeB; Provisional
3-654 0e+00

p-hydroxybenzoic acid efflux subunit AaeB; Provisional


Pssm-ID: 182600  Cd Length: 652  Bit Score: 1316.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    3 IFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGL 82
Cdd:PRK10631   1 IFSIANQRLRFAVKLAFAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPFSGAIRYRGMLRIIGTFIGCIAAL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   83 VIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIM 162
Cdd:PRK10631  81 VIIIATIRAPLLMILLCCIWAGFCTWISSLVRVENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  163 ADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAIN 242
Cdd:PRK10631 161 ADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDKEEVDKAWGDLVRRTTALNGMRSNLMMESSRWQRANRRLKALN 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  243 TLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKR 322
Cdd:PRK10631 241 TLSLTLITQACETYLIQNTRPELITDTFRELFDTPVETPQDVHKQLKRLRRVIAWTGERETPVTIYSWVGAATRYLLLKK 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  323 GVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 402
Cdd:PRK10631 321 GVISNTKISATEEEILQGEPVVKVESAERHHAMINGWRTTLATALGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  403 VAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQF 482
Cdd:PRK10631 401 VAIDFLYGTLAALPLGALYFMVIIPNTQQSMLLLCISLGVLGFFIGIEVQKRRLGSLGALASTINILVLDNPMTFHFSQF 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  483 LDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRL 562
Cdd:PRK10631 481 LDSALGQIVGCFLALIVILLVRDNSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLLNKFPGDIPKYRL 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  563 ALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVNRLA 642
Cdd:PRK10631 561 ALTLIIAHQRLRDAPIPVNEDLSAFHRQLRRTADHVISARSDDKRRRYFGQLLEELDIYQEKLRIWQAPPQVTEPVKRLT 640
                        650
                 ....*....|..
gi 16131130  643 GMLHKYQHALTD 654
Cdd:PRK10631 641 GMLHKYQHALTD 652
FUSC pfam04632
Fusaric acid resistance protein family; This family includes a conserved region found in two ...
12-652 1.22e-156

Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.


Pssm-ID: 428044 [Multi-domain]  Cd Length: 655  Bit Score: 466.38  E-value: 1.22e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    12 RFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAagtafaaggEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRA 91
Cdd:pfam04632   2 LFALKTFLAAMLALYIALRLELPQPYWAMTTVFIVS---------QPLSGAVLSKSFYRLLGTLVGAAAAVLLVALFVQA 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    92 PLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPRS 171
Cdd:pfam04632  73 PLLFLLALALWIGLCLALSLLDRNFRSYAFVLAGYTAAIIGLPAVADPEAIFDIAVARVSEISLGILCAALVSALVFPRS 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   172 IKQEVDRELESLLVAQYQLMQLCIK-HGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAINTLSLTLIT 250
Cdd:pfam04632 153 VGPALRARLRARLRDALRLAAAALAgAPGAEAFEAARLRLAADILALEALRSHAAFESPRGRARARALRRLLARMLALLP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   251 QSCETYLIQNTRPEL---ITDTFREFFDTPV-----ETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKR 322
Cdd:pfam04632 233 RLRSLARLLARLRTEgagTVPELAALLDELAaweaaLAAEALQAALAALRARLRALRPALPLDFDTAAELLARLADLLAE 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   323 GVISNTKINATEEEILQGE-PEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPR 401
Cdd:pfam04632 313 LAEALASCRALRHPIAQGArPARLARHRDHGAALLNGLRAALAILLAGAFWIATGWPSGATAVLLAAIVCSLFATLDNPA 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   402 MVAIDFIYGTLAALPLGLLYFLVIIPNTqQSMLLLCISLAVLGFFLGIEVQKRRLGSMGaLASTINIIVL---DNPMTFH 478
Cdd:pfam04632 393 PAARQFLRGTLLAALAALLYLFFVLPHV-DGFPLLCLVLAPPLLLGGLLLARPRTAGIG-LGLAVFFALLlapQNPYTYD 470
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   479 FSQFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLP 558
Cdd:pfam04632 471 FAAFLNSALALLLGVLLAAVVFRLIRPVSAEWLARRLLRALRRDLARAARRRAAGARARFESRMLDRLAQLAPRLAAAPP 550
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   559 KFRLALTMIIAHQRLRDAPIPVNEDL-SAFHRQMRRTADHVISARS-------DDKRRRYFGQLLEELEIYQEKLRIWQA 630
Cdd:pfam04632 551 ARRRALRDGLAALRLGRAVIRLRRALaRALPAPARAALDRVLRALArapaagrLARRLRAPARLLRELDAALAALAADGA 630
                         650       660
                  ....*....|....*....|....*
gi 16131130   631 PPQ---VTEPVNRLAGMLHKYQHAL 652
Cdd:pfam04632 631 PSAlrrALAALHFLRLALLDPASAF 655
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
4-250 2.21e-47

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 168.26  E-value: 2.21e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   4 FSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAgtafaaggePYSGAIRYRGFLRIIGTFIGCIAGLV 83
Cdd:COG1289  40 LSPDSPAFRHALRLALAALLALLIALLLGLPHPYWALLTVLIVLQ---------PSYGATLSRALQRILGTLLGALAGLL 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  84 iIIAMIRAPLLMILVCCIWAGFCtWISSLVRienSYAWGLAGYTALIIVITIQPEPlLTPQFAVERCSEIVIGIVCAIMA 163
Cdd:COG1289 111 -LLALFPQPLLLLLALALVLGLC-FFALLTR---SYAFALAGITAAVVLLFALLGP-GVFDVALARVLDTLIGILIALLV 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130 164 DLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHG---DGEVVDKAWGDLVRRTTALQGMRSNLNMESSRW-ARANRRLK 239
Cdd:COG1289 185 SYLLWPRWARRRLRARLARALRANARYLRALLSQGdpaDDLALRAARRRLAAALAALEALLQRALSEPPRGrRRELRALL 264
                       250
                ....*....|.
gi 16131130 240 AINTLSLTLIT 250
Cdd:COG1289 265 ALNHRLLSLLS 275
 
Name Accession Description Interval E-value
PRK10631 PRK10631
p-hydroxybenzoic acid efflux subunit AaeB; Provisional
3-654 0e+00

p-hydroxybenzoic acid efflux subunit AaeB; Provisional


Pssm-ID: 182600  Cd Length: 652  Bit Score: 1316.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    3 IFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGL 82
Cdd:PRK10631   1 IFSIANQRLRFAVKLAFAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPFSGAIRYRGMLRIIGTFIGCIAAL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   83 VIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIM 162
Cdd:PRK10631  81 VIIIATIRAPLLMILLCCIWAGFCTWISSLVRVENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  163 ADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAIN 242
Cdd:PRK10631 161 ADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDKEEVDKAWGDLVRRTTALNGMRSNLMMESSRWQRANRRLKALN 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  243 TLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKR 322
Cdd:PRK10631 241 TLSLTLITQACETYLIQNTRPELITDTFRELFDTPVETPQDVHKQLKRLRRVIAWTGERETPVTIYSWVGAATRYLLLKK 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  323 GVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 402
Cdd:PRK10631 321 GVISNTKISATEEEILQGEPVVKVESAERHHAMINGWRTTLATALGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRM 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  403 VAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQF 482
Cdd:PRK10631 401 VAIDFLYGTLAALPLGALYFMVIIPNTQQSMLLLCISLGVLGFFIGIEVQKRRLGSLGALASTINILVLDNPMTFHFSQF 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  483 LDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRL 562
Cdd:PRK10631 481 LDSALGQIVGCFLALIVILLVRDNSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLLNKFPGDIPKYRL 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  563 ALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVNRLA 642
Cdd:PRK10631 561 ALTLIIAHQRLRDAPIPVNEDLSAFHRQLRRTADHVISARSDDKRRRYFGQLLEELDIYQEKLRIWQAPPQVTEPVKRLT 640
                        650
                 ....*....|..
gi 16131130  643 GMLHKYQHALTD 654
Cdd:PRK10631 641 GMLHKYQHALTD 652
FUSC pfam04632
Fusaric acid resistance protein family; This family includes a conserved region found in two ...
12-652 1.22e-156

Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.


Pssm-ID: 428044 [Multi-domain]  Cd Length: 655  Bit Score: 466.38  E-value: 1.22e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    12 RFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAagtafaaggEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRA 91
Cdd:pfam04632   2 LFALKTFLAAMLALYIALRLELPQPYWAMTTVFIVS---------QPLSGAVLSKSFYRLLGTLVGAAAAVLLVALFVQA 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    92 PLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPRS 171
Cdd:pfam04632  73 PLLFLLALALWIGLCLALSLLDRNFRSYAFVLAGYTAAIIGLPAVADPEAIFDIAVARVSEISLGILCAALVSALVFPRS 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   172 IKQEVDRELESLLVAQYQLMQLCIK-HGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAINTLSLTLIT 250
Cdd:pfam04632 153 VGPALRARLRARLRDALRLAAAALAgAPGAEAFEAARLRLAADILALEALRSHAAFESPRGRARARALRRLLARMLALLP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   251 QSCETYLIQNTRPEL---ITDTFREFFDTPV-----ETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKR 322
Cdd:pfam04632 233 RLRSLARLLARLRTEgagTVPELAALLDELAaweaaLAAEALQAALAALRARLRALRPALPLDFDTAAELLARLADLLAE 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   323 GVISNTKINATEEEILQGE-PEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPR 401
Cdd:pfam04632 313 LAEALASCRALRHPIAQGArPARLARHRDHGAALLNGLRAALAILLAGAFWIATGWPSGATAVLLAAIVCSLFATLDNPA 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   402 MVAIDFIYGTLAALPLGLLYFLVIIPNTqQSMLLLCISLAVLGFFLGIEVQKRRLGSMGaLASTINIIVL---DNPMTFH 478
Cdd:pfam04632 393 PAARQFLRGTLLAALAALLYLFFVLPHV-DGFPLLCLVLAPPLLLGGLLLARPRTAGIG-LGLAVFFALLlapQNPYTYD 470
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   479 FSQFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLP 558
Cdd:pfam04632 471 FAAFLNSALALLLGVLLAAVVFRLIRPVSAEWLARRLLRALRRDLARAARRRAAGARARFESRMLDRLAQLAPRLAAAPP 550
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   559 KFRLALTMIIAHQRLRDAPIPVNEDL-SAFHRQMRRTADHVISARS-------DDKRRRYFGQLLEELEIYQEKLRIWQA 630
Cdd:pfam04632 551 ARRRALRDGLAALRLGRAVIRLRRALaRALPAPARAALDRVLRALArapaagrLARRLRAPARLLRELDAALAALAADGA 630
                         650       660
                  ....*....|....*....|....*
gi 16131130   631 PPQ---VTEPVNRLAGMLHKYQHAL 652
Cdd:pfam04632 631 PSAlrrALAALHFLRLALLDPASAF 655
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
4-250 2.21e-47

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 168.26  E-value: 2.21e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   4 FSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAgtafaaggePYSGAIRYRGFLRIIGTFIGCIAGLV 83
Cdd:COG1289  40 LSPDSPAFRHALRLALAALLALLIALLLGLPHPYWALLTVLIVLQ---------PSYGATLSRALQRILGTLLGALAGLL 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  84 iIIAMIRAPLLMILVCCIWAGFCtWISSLVRienSYAWGLAGYTALIIVITIQPEPlLTPQFAVERCSEIVIGIVCAIMA 163
Cdd:COG1289 111 -LLALFPQPLLLLLALALVLGLC-FFALLTR---SYAFALAGITAAVVLLFALLGP-GVFDVALARVLDTLIGILIALLV 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130 164 DLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHG---DGEVVDKAWGDLVRRTTALQGMRSNLNMESSRW-ARANRRLK 239
Cdd:COG1289 185 SYLLWPRWARRRLRARLARALRANARYLRALLSQGdpaDDLALRAARRRLAAALAALEALLQRALSEPPRGrRRELRALL 264
                       250
                ....*....|.
gi 16131130 240 AINTLSLTLIT 250
Cdd:COG1289 265 ALNHRLLSLLS 275
FUSC_2 pfam13515
Fusaric acid resistance protein-like;
23-163 3.17e-15

Fusaric acid resistance protein-like;


Pssm-ID: 433273 [Multi-domain]  Cd Length: 126  Bit Score: 72.66  E-value: 3.17e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130    23 LALFVGFHFQLETPRWAVLTAAIVAAgtafaaggePYSGAIRYRGFLRIIGTFIGCIAGLViIIAMIRAPLLMILVCCIW 102
Cdd:pfam13515   1 LAALIAELLGLPRGYWAPIAAAIVLQ---------PTLGATLRRAVQRILGTVLGVLLGLL-LLALLPGPLQLILVVALL 70
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131130   103 AGFCTWISSlvrieNSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMA 163
Cdd:pfam13515  71 GFLAEYLIG-----RNYALAQVFVTPLALLLASLAGGGGPPELALLRILDTLIGALIALLV 126
YgaE COG4129
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family [Function unknown];
1-210 9.35e-14

Uncharacterized membrane protein YgaE, UPF0421/DUF939 family [Function unknown];


Pssm-ID: 443305 [Multi-domain]  Cd Length: 197  Bit Score: 70.40  E-value: 9.35e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130   1 MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVaagtafaagGEPYSGAIRYRGFLRIIGTFIGCIA 80
Cdd:COG4129   1 MKRRRALRRIGLRTLKTALAAALAWLIAELLGLPYPFFAAIAAVLC---------LQPTVGRSLRRALERILGVLIGALV 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130  81 GLVIIIAMIRAPLLMILVCCIWAGFCTWISslvrieNSYAWGLAGYTALIIVITIQPEPllTPQFAVERCSEIVIGIVCA 160
Cdd:COG4129  72 GVLFFLLLGYGPWQLGLAVLLAILLAVLLK------LGEGIVLAAVTALLVLLLGSPDD--SLGYALNRLLDTLIGVGVA 143
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|
gi 16131130 161 IMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDL 210
Cdd:COG4129 144 LLVNLLLLPPDPERRLRRAAAELLEELADILRELLRLRDASDAEEALKRL 193
YccC COG1289
Uncharacterized membrane protein YccC [Function unknown];
360-604 1.58e-04

Uncharacterized membrane protein YccC [Function unknown];


Pssm-ID: 440900 [Multi-domain]  Cd Length: 280  Bit Score: 43.84  E-value: 1.58e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130 360 RTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTslamrLPNPRMV---AIDFIYGTLaalpLGLLYFLVIIPNTQQsMLLL 436
Cdd:COG1289  52 RLALAALLALLIALLLGLPHPYWALLTVLIVL-----QPSYGATlsrALQRILGTL----LGALAGLLLLALFPQ-PLLL 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130 437 CISLAVLGFFLGIEVQKRRLGsMGALASTINIIVLDNPMTFH-FSQFLDSALGQIVGCVLAFTVILLVrdkSRDRTGRVL 515
Cdd:COG1289 122 LLALALVLGLCFFALLTRSYA-FALAGITAAVVLLFALLGPGvFDVALARVLDTLIGILIALLVSYLL---WPRWARRRL 197
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131130 516 LNQFVSA--AVSAMTTNVARRKENHLPALYQQLFLLMNkfpGDLPKFRLALTmiiahQRLRDAPIPVNEDLSAFHRQMRR 593
Cdd:COG1289 198 RARLARAlrANARYLRALLSQGDPADDLALRAARRRLA---AALAALEALLQ-----RALSEPPRGRRRELRALLALNHR 269
                       250
                ....*....|.
gi 16131130 594 TADHVISARSD 604
Cdd:COG1289 270 LLSLLSALGAR 280
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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