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Conserved domains on  [gi|16131714|ref|NP_418310|]
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putative transporter YihN [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

MFS transporter( domain architecture ID 10150691)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
13-403 3.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


:

Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 3.98e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  13 LTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTT 92
Cdd:cd06174   1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  93 MPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIW 172
Cdd:cd06174  81 APSFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 173 FYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLP 252
Cdd:cd06174 157 IAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGL 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 253 VALVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQR 332
Cdd:cd06174 237 SVAVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLL 311
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 333 AVFFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174 312 PLSFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
 
Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
13-403 3.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 3.98e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  13 LTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTT 92
Cdd:cd06174   1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  93 MPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIW 172
Cdd:cd06174  81 APSFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 173 FYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLP 252
Cdd:cd06174 157 IAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGL 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 253 VALVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQR 332
Cdd:cd06174 237 SVAVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLL 311
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 333 AVFFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174 312 PLSFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
3-411 3.15e-30

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 119.59  E-value: 3.15e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   3 TKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIA 82
Cdd:COG2271   5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  83 TGLLGVYLTTMPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGs 162
Cdd:COG2271  85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGF-FPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFG- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 163 gllgfkagiWFYSLIVIAVGIIIFFVLNdkeeapsvevkkedgaskntsmtsvlkdktIWLIAFNVFFVYAVYCGLTFFI 242
Cdd:COG2271 163 ---------WRAAFLILGLPGLLLALLR------------------------------FWLLALAYFLVYFALYGFLTWL 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 243 P-FLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPhesmPVYLGMACT 321
Cdd:COG2271 204 PtYLVEVRGLSLAQAGLLLSLPFLAG-IVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLP----SPALAIALL 278
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 322 LGFGAIVFTQRAVFFAPIGEAkIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:COG2271 279 FLAGFGLGGAFGLLWALAAEL-FPKKARGTASGLVNTFGFLGGALGPLLVGYLLDA----TGYQAAFLLLAALALLAALL 353
                       410
                ....*....|
gi 16131714 402 SVMLVKRISQ 411
Cdd:COG2271 354 ALLLLRETRK 363
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
34-377 2.88e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 76.65  E-value: 2.88e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714    34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMM 113
Cdd:TIGR00881  21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF-QGM 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllgfKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:TIGR00881 100 GWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW----HWVFIVPGIIAIIVSLICFLLLRDSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   194 EAPSV---------------EVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFlkniYLLPVALVGA 258
Cdd:TIGR00881 176 QSCGLppaeempneepdgdaEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPL----YLTQEKGFSK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   259 YGIINQYCLKMIGGPIG----GMISDKILKSPSKYLCYTFI-ISTAALVLLIMLPHESMPVYLGMACTLGF----GAIVF 329
Cdd:TIGR00881 252 EKASWAFTLYELGGLVGtllaGWLSDKLFNGRRGPLAVFFMaLIIVSLLVYWLNPAANPLMDLICLFALGFlvygPQMLI 331
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 16131714   330 TQRAVFFAPigeakiaENKTGAAMALGSFIGYAPAMFCFSLYGYILDL 377
Cdd:TIGR00881 332 GVIASELAP-------KKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372
MFS_1 pfam07690
Major Facilitator Superfamily;
29-366 7.32e-14

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 72.07  E-value: 7.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714    29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:pfam07690  18 ALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   109 TCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:pfam07690  98 GAGAL-FPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-----GWRAAFLILAILSLLAAVLLLLP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   189 LNDKEEAPSVEVKKEdGASKNTSMTSVLKDKTIWLIaFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLK 268
Cdd:pfam07690 172 RPPPESKRPKPAEEA-RLSLIVAWKALLRDPVLWLL-LALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGG-LLG 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   269 MIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFApigeAKIAENK 348
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVS----DLAPKEE 324
                         330
                  ....*....|....*...
gi 16131714   349 TGAAMALGSFIGYAPAMF 366
Cdd:pfam07690 325 RGTASGLYNTAGSLGGAL 342
uhpT PRK09556
hexose-6-phosphate:phosphate antiporter;
34-238 4.59e-05

hexose-6-phosphate:phosphate antiporter;


Pssm-ID: 236564 [Multi-domain]  Cd Length: 467  Bit Score: 45.42  E-value: 4.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLL----GVYLTTMPGYWGILFV-WALFGV 108
Cdd:PRK09556  55 MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICmlgfGASLGSGSVSLGLMIAlWALSGF 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  109 TcDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAfsALAVF---TWFGSGLLGFkagIWFYSLIVIAVGIII 185
Cdd:PRK09556 135 F-QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAG--GVALWganYFFDGHVIGM---FIFPSIIALIIGFIG 208
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16131714  186 FFV---------LNDKEEAPSVEVKKEDGASKNTSMTS-------VLKDKTIWLIAFNVFFVYAVYCGL 238
Cdd:PRK09556 209 LRYgsdspeelgWGKAEEIFGEPISEEDKETESTDMTKwqifveyVLKNPVIWLLCFANIFLYIVRIGI 277
 
Name Accession Description Interval E-value
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
13-403 3.98e-34

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 130.62  E-value: 3.98e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  13 LTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTT 92
Cdd:cd06174   1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  93 MPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGsglLGFKAGIW 172
Cdd:cd06174  81 APSFWLLLLGRFLLGLGSGLI-DPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLG---FGWRAVFL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 173 FYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLP 252
Cdd:cd06174 157 IAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGL 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 253 VALVGAYGIINQYCLKMIGGPIGGMISDKILKspskyLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQR 332
Cdd:cd06174 237 SVAVAGLLLSLFGLAGALGSLLLGLLSDRLIG-----RKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLL 311
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 333 AVFFAPIGEAKIAENKtGAAMALGSFIGYAPAMFCFSLYGYILDlnpGIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd06174 312 PLSFALIAELFPPEIR-GTAFGLLNTFGFLGGAIGPLLAGFLLA---ATFGLTGAFLVLAVLLLLAAILLL 378
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
3-411 3.15e-30

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 119.59  E-value: 3.15e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   3 TKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIA 82
Cdd:COG2271   5 SRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  83 TGLLGVYLTTMPGYWGILFVWALFGVTCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGs 162
Cdd:COG2271  85 WGLATLLFGFATSFWQLLLLRFLLGLGEAGF-FPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFG- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 163 gllgfkagiWFYSLIVIAVGIIIFFVLNdkeeapsvevkkedgaskntsmtsvlkdktIWLIAFNVFFVYAVYCGLTFFI 242
Cdd:COG2271 163 ---------WRAAFLILGLPGLLLALLR------------------------------FWLLALAYFLVYFALYGFLTWL 203
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 243 P-FLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPhesmPVYLGMACT 321
Cdd:COG2271 204 PtYLVEVRGLSLAQAGLLLSLPFLAG-IVGSLLGGWLSDRLGRRRKLVLAIGLLLAALALLLLALLP----SPALAIALL 278
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 322 LGFGAIVFTQRAVFFAPIGEAkIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:COG2271 279 FLAGFGLGGAFGLLWALAAEL-FPKKARGTASGLVNTFGFLGGALGPLLVGYLLDA----TGYQAAFLLLAALALLAALL 353
                       410
                ....*....|
gi 16131714 402 SVMLVKRISQ 411
Cdd:COG2271 354 ALLLLRETRK 363
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
29-415 3.41e-24

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 103.04  E-value: 3.41e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:COG2223  26 VLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGI 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 109 tCDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:COG2223 106 -GGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAF-----GWRNAFLILGILLLVVAVLAWLF 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 189 LNDKEEAPSVEVKKEDGASKntsmtSVLKDKTIWLIAFNVFFVYAVYCGLT-FFIPFLKNIYLLPVALVGAYGIInQYCL 267
Cdd:COG2223 180 LRDPPAGAAAAAKASLRDQL-----EALRDPRFWLLSLLYFGTFGSFIGFSsWLPPYLVDQFGLSAATAGLLAAL-FALL 253
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 268 KMIGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHeSMPVYLGMACTLGFGAIVFTqrAVFFAPIGEAkIAEN 347
Cdd:COG2223 254 GALGRPLGGWLSDRI--GGRRVLLIVFALMALGLLLLALALG-SLWLFLVLFLLLGLALGGGN--GAVFALVPDI-FPTK 327
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16131714 348 KTGAAMALGSFIGYAPAMFCFSLYGYILDLNPgiiGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKE 415
Cdd:COG2223 328 NAGAVYGLVGAAGGLGGFLGPLLFGALLDATG---SYTAAFLVFAVLALVALVLTLLLYRRPRRAAAA 392
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
6-406 1.98e-17

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 83.09  E-value: 1.98e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   6 KWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGL 85
Cdd:cd17312   1 RWRIFLGVFLGYAAYYVCRKNFSVAKPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSAL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  86 LGVYLTTMPGYWGILFVWALFGVTcDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLL 165
Cdd:cd17312  81 ANIFMGFSTSLWFFAVLWGLNGLF-QSMGWPPCVKLLGNWFSKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 166 GFKAGIwfyslIVIAVGIIIFFVLNDkeeapsvevkkedgaskntsmtsvlKDKTIWLIAFNVFFVYAVYCGLTFFIP-F 244
Cdd:cd17312 160 FLVPGI-----VGLVVAIILFFFLRD-------------------------SPPYVWVLSLAYAFVYIVRYACLDWGPlY 209
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 245 LKNiyLLPVALVGAYGIINQYCLKMIGGPIG-GMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMpvYLGMACTLG 323
Cdd:cd17312 210 LYE--VKGYSLIDAGWFSSLYEVGGIAGTILaGLLSDKLFGGRRAPIAVIYMLLMTLSLALFWFFPHNK--LLSIVLLFL 285
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 324 FGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDlnpgiigyKIVFGIMACFAFSGAVVSV 403
Cdd:cd17312 286 IGFFVGGPINLIGGAAAQDIGRKEAAGTATGFVGLFGYLGASLAGLPLGYIID--------HYGWSTVFYFLISAALLSV 357

                ...
gi 16131714 404 MLV 406
Cdd:cd17312 358 LLL 360
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
34-377 2.88e-15

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 76.65  E-value: 2.88e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714    34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMM 113
Cdd:TIGR00881  21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF-QGM 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllgfKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:TIGR00881 100 GWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW----HWVFIVPGIIAIIVSLICFLLLRDSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   194 EAPSV---------------EVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFlkniYLLPVALVGA 258
Cdd:TIGR00881 176 QSCGLppaeempneepdgdaEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPL----YLTQEKGFSK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   259 YGIINQYCLKMIGGPIG----GMISDKILKSPSKYLCYTFI-ISTAALVLLIMLPHESMPVYLGMACTLGF----GAIVF 329
Cdd:TIGR00881 252 EKASWAFTLYELGGLVGtllaGWLSDKLFNGRRGPLAVFFMaLIIVSLLVYWLNPAANPLMDLICLFALGFlvygPQMLI 331
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 16131714   330 TQRAVFFAPigeakiaENKTGAAMALGSFIGYAPAMFCFSLYGYILDL 377
Cdd:TIGR00881 332 GVIASELAP-------KKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
34-376 5.56e-14

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 73.04  E-value: 5.56e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17475  22 LQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSV 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 114 NwPVLLKSVSRLGNSEQQGRLFGFFETGRgivdTVVAFSALAVFTWFGSGlLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17475 102 Q-PGGGRAIMRWFPPRERGLAMGIRQTGV----PLGGALAAALLPPLALH-YGWRAAFVVAGLVSILAAVLFWLFYREPP 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 194 EAPSVevkKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAV-YCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLKMIGG 272
Cdd:cd17475 176 AASAA---TESASTLLRSLKEVLRNRDVWLIAIAGALLVAPqFALLTFLLLFLHDHLGLSVVAAGALLAVAQ-LGGALGR 251
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 273 PIGGMISDKILKSPSK-YLCYTFIISTAALVLLIMLPHESMPVYLGMACTLgFGAIVFTQRAVFFAPIGEAKIAENkTGA 351
Cdd:cd17475 252 IGLGRVSDRVFGGRRRpVLVITAAIAAAALLVLSLLSPGTPLWLLVLLLIL-LGLFAIGWNGLYLTLVAESAGPEQ-AGT 329
                       330       340
                ....*....|....*....|....*
gi 16131714 352 AMALGSFIGYAPAMFCFSLYGYILD 376
Cdd:cd17475 330 ALGLANTINFIGIAIGPPLFGLLVD 354
MFS_1 pfam07690
Major Facilitator Superfamily;
29-366 7.32e-14

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 72.07  E-value: 7.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714    29 AFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGV 108
Cdd:pfam07690  18 ALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   109 TCDMMnWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFV 188
Cdd:pfam07690  98 GAGAL-FPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF-----GWRAAFLILAILSLLAAVLLLLP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   189 LNDKEEAPSVEVKKEdGASKNTSMTSVLKDKTIWLIaFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQyCLK 268
Cdd:pfam07690 172 RPPPESKRPKPAEEA-RLSLIVAWKALLRDPVLWLL-LALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGG-LLG 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   269 MIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFApigeAKIAENK 348
Cdd:pfam07690 249 AIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVS----DLAPKEE 324
                         330
                  ....*....|....*...
gi 16131714   349 TGAAMALGSFIGYAPAMF 366
Cdd:pfam07690 325 RGTASGLYNTAGSLGGAL 342
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
1-412 1.67e-13

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 71.42  E-value: 1.67e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   1 MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSL 80
Cdd:COG0738   1 MSKKNYRRALIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  81 IATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNwpVLLKSVSRLGNSEQQGRLFGFFEtgrgivdtvvAFSALAVFT-- 158
Cdd:COG0738  81 LLMALGLLLFALAPSYPLLLLALFLLGLGLGLLD--VAANPYVAALGPETAASRLNLLH----------AFFSLGALLgp 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 159 WFGSGLLGFKAGI-WFYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAV-YC 236
Cdd:COG0738 149 LLGGLLILLGLSLsWHLPYLILAVLLLLLALLFLRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLLGGLAIFLYVGAeGA 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 237 GLTFFIPFLKNIYLLPVAlVGAYGIINQYCLKMIGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHESMPVYL 316
Cdd:COG0738 229 IGDWLPLYLKDVLGLSEA-TAALGLSLFWGGMTIGRFLGGFLLKRF--GPVRLLRLSALLAAVGLLLALLAPGPWLALIG 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 317 GMACTLGFGAIVftqrAVFFAPIGEAKiaENKTGAAMALGSFIGYAPAMFCFSLYGYILDlnpgIIGYKIVFGIMACFAF 396
Cdd:COG0738 306 LALVGLGLSLMF----PTIFSLALDGL--GKRTAAAVSAVLIMGIVGGAIGPPLIGFLAD----AFGLRAAFLVPLVCYL 375
                       410
                ....*....|....*.
gi 16131714 397 SGAVVSVMLVKRISQR 412
Cdd:COG0738 376 LILLLALALKRKRRKK 391
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
33-328 1.93e-13

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 71.16  E-value: 1.93e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:COG2814  35 LIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGLGAGA 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 113 MnWPVLLKSVSRLGNSEQQGRLFGFFETGrgivdTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNdk 192
Cdd:COG2814 115 L-FPAALALIADLVPPERRGRALGLLGAG-----LGLGPALGPLLGGLLADLFGWRWVFLVNAVLALLALLLLLRLLP-- 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 193 eeapsvEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYCLkMIG 271
Cdd:COG2814 187 ------ESRPAARARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPlYLQEVLGLSASAAGLLLALFGLGG-VLG 259
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 16131714 272 GPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIV 328
Cdd:COG2814 260 ALLAGRLADRF--GRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLF 314
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
38-406 2.58e-12

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 67.60  E-value: 2.58e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMMNWPV 117
Cdd:cd17325  26 LGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGL-ASAAVWPA 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 118 LLKSVSRLGNSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLndKEEAPS 197
Cdd:cd17325 105 AMALIADIAPPEERGRAMGIFSSAIGL-----GFLIGPLLGGLLADALGYRAPFLVCAALALLALVLALLLL--PEPRPP 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 198 VEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVG----AYGIINqyclkMIGG 272
Cdd:cd17325 178 PNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPlYAAELGGLSPAQIGllfgAQGLAS-----ALSQ 252
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 273 PIGGMISDKILKSPskYLCYTFIISTAALVLLIMLPheSMPVYLGMACTLGFG-AIVFTQRAVFFAPIgeakIAENKTGA 351
Cdd:cd17325 253 PPAGKLSDRIGRKP--LILIGLLLSAVALLLLPLAT--SFWLLLLLLALLGLGlGLVFPATLALLADI----VPPEGRGT 324
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*
gi 16131714 352 AMALGSFIGYAPAMFCFSLYGYILDLnpgiIGYKIVFGIMACFAFSGAVVSVMLV 406
Cdd:cd17325 325 AMGLFNTAFSLGMVLGPLLGGFLYDA----FGFATPFLAAAALLLLAAVLFLLLR 375
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
34-285 1.35e-11

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 65.73  E-value: 1.35e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM- 112
Cdd:cd17345  29 LIEQYGLSKTEIGLIGSALSIAYGLSKFVMGNLSDRSNPKRFLAIGLILSAIINILIGFVPSATSSVGLMFILLFLNGWf 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 113 --MNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllGFKAGIWFYSLIVIAVGIIIFFVLN 190
Cdd:cd17345 109 qgMGWPPSGRTMVHWFSKKERGTWTSIWNISHNVGGGLVGPLAGLGLAIFGDG--WWRGAFIFPAIIAIIVAVIVLFLGK 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 191 DKEEA---PSVEVKKED--------GASKNTS-----MTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPflknIYLLPVA 254
Cdd:cd17345 187 DTPESeglPPIEEYKGDypeeadgeEEEQELSaweifVKYVLKNKLLWYIAIANVFVYLVRYGILDWAP----TYLSEVK 262
                       250       260       270
                ....*....|....*....|....*....|....*
gi 16131714 255 LVGAYGIINQYCLKMIGGPIG----GMISDKILKS 285
Cdd:cd17345 263 GFSKAQAMWAFSLFEWAAIPGtllaGWLSDKLFKG 297
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
33-362 8.60e-11

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 62.95  E-value: 8.60e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:cd17324  24 DIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGG 103
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 113 MnWPVLLKSVSRLGNSEQQGRLFGFFETGrgivdTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLndk 192
Cdd:cd17324 104 F-WAIAAAYAADLVPPEKRGRAIGLVFSG-----LTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWRLL--- 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 193 eeaPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVY-AVYCGLTFFIPFLKNI-YLLPVALVGAYGIInqYCLKMI 270
Cdd:cd17324 175 ---PSLPPKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFgGFFALYTYLAPFLTDVpGFSSSAIIGLLLLF--GVAGVV 249
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 271 GGPIGGMISDKIlksPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMA-CTLGFGAIVFTQRAVFFapigeaKIAENKT 349
Cdd:cd17324 250 GSPLAGRLADRG---GRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVlWGLGFFAAHSALQTRVL------RLAPEAR 320
                       330
                ....*....|...
gi 16131714 350 GAAMALGSFIGYA 362
Cdd:cd17324 321 GLASSLYLAAYNL 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
127-419 1.99e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 62.23  E-value: 1.99e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 127 NSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFG-SGLLGFKAGIWFYSLIVIAVGIIIFFVLndkEEAPSVEVKKEDG 205
Cdd:COG2211 141 DYEERTRLSSWRFAFAGLGGLLASVLPPPLVAAFGgDAALGYRLTALIFAVLGLLAFLLTFFGT---KERPVPEEEKVSL 217
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 206 ASkntSMTSVLKDKT-IWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQYCLkMIGGPIGGMISDKIlk 284
Cdd:COG2211 218 KE---SLKALLKNRPfLLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAA-LLGAPLWPRLAKRF-- 291
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 285 SPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTqrAVFFA------PIGEAKIAENKTGAAMALGSF 358
Cdd:COG2211 292 GKKKAFIIGLLLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAIL--VLPWAmladvvDYDEWKTGRRREGLYFGIFTF 369
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 359 IGYAPAMFCFSLYGYILDL---NPG-------IIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKEMLAA 419
Cdd:COG2211 370 AIKLGQALAGALAGLLLALfgyVAGaaqspsaLTGIRLLFFLLPAVLLLLAALLLLFYPLTRERHAEIRAE 440
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
34-187 6.56e-10

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 60.28  E-value: 6.56e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17325 226 AAELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLV 305
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16131714 114 nWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFF 187
Cdd:cd17325 306 -FPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAF-----GFATPFLAAAALLLLAAVLFLL 373
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
34-308 1.76e-08

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 56.03  E-value: 1.76e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMM 113
Cdd:cd17478  22 LIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVALAGI-GSAA 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 114 NWPVLLKSVSRLGnSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17478 101 FHPEGARLASQAA-GGRRGLAMSIFSVGGNL-----GFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRLRPLKK 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 194 EAPSVEVKKEDGASKNTSMTSVLkdktIWLIAFnVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAY-GIINQYClkMIGG 272
Cdd:cd17478 175 PEAKKAAAKSSARSTLKGVWRAL----LLLLII-VFLRSWVLSSLTTFLPFYLVQRGYSLVFAGLLlSLFLFAG--AIGT 247
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 16131714 273 PIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLP 308
Cdd:cd17478 248 LIGGPLSDRF--GRRRVIIASLLLAAPFLLLFLLTP 281
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
33-405 1.99e-08

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 55.65  E-value: 1.99e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDM 112
Cdd:cd17319  28 TIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVA-EA 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 113 MNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIvDTVVAFSALAVFTwfgsGLLGFKAGIWFYSLIVIAVGIIIFFVLndk 192
Cdd:cd17319 107 GFFPGAIKALAEWFPARERGRATGLFNSGAPL-GAAIGPPLSGWLL----LLFGWRWAFIIEGLLGLLLAVLWWFYL--- 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 193 eeapsvevkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYCLkMIG 271
Cdd:cd17319 179 --------------------------RQVWGLALGYFGINYALYGLLTWLPtYLKQARGFSLKQVGLLAAIPFLAG-AIG 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 272 GPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMActLGFGAIVFTQrAVFFAPIGEAkIAENKTGA 351
Cdd:cd17319 232 MILGGRLSDRLLRGARRLVIIIGLLLAAVGLLLAYLTTSPVVAVILLS--LAGFGIGAAS-PVFWSLPADL-LPGEAAAT 307
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....
gi 16131714 352 AMALGSFIGYAPAMFCFSLYGYILDLNpgiIGYKIVFGIMACFAFSGAVVSVML 405
Cdd:cd17319 308 AGGLINSGGNLGGFVAPLLIGYLVDAT---GSYTAAFLFLAAVALLAALLVLLL 358
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
30-327 9.66e-08

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 53.81  E-value: 9.66e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  30 FYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVT 109
Cdd:cd17355  25 FIIPIIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLLWGLLGGG 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 110 CDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFG--SGLLGFKAgiwfysLIVIAVGIIIFF 187
Cdd:cd17355 105 GAGTLAAVAFATVAAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGwrTALLVLAL------LALLVLVPVLLL 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 188 VLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFV-YAVYCGLTFFIPFLKNIYLLPVALVGAYGIINqyC 266
Cdd:cd17355 179 LRRRPADLALRAYDDASPASPGSTLKEALRSASFWLLALAFFLCgFAVVGLIVHLVPYLADRGISPAAAAVALALIG--L 256
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 267 LKMIGGPIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHeSMPVYLGMACTLGFGAI 327
Cdd:cd17355 257 FNIVGRLLSGWLGDRY--SPRRLLAASYALRALGLALLLLLPF-PPLALLLFAALFGLGWG 314
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
33-408 9.99e-08

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 53.72  E-value: 9.99e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  33 PMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDM 112
Cdd:COG2807  43 EIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIGAGIAV 122
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 113 MN--WPVLLKSVSrlgnSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFgsgllGFKAGIWFYSLIVIAVGIIIFFVLN 190
Cdd:COG2807 123 GNvlLPGLIKRWF----PDRVGLMTGLYTAAMGLGAALAAGLTVPLAAAL-----GWRGALAVWALLALLALLLWLPLLR 193
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 191 DKEEAPSvevkkedGASKNTSMTSVLKDKTIWLIAFnVFFVYAV--YCGLTFFIPFLKNIYLLPVA---LVGAYGIINqy 265
Cdd:COG2807 194 RRPAAAA-------AAPAAASLRSLWRSPLAWLLTL-FFGLQSLlyYAVVAWLPPILRDAGLSAATaglLLSLFQLAG-- 263
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 266 clkMIGGPIGGMISDKiLKSPSKYLCYTFIISTAALVLLIMLPHESMPVY-----LGMACTLGFGAIVFTQRAvffapiG 340
Cdd:COG2807 264 ---IPGSLLVPLLADR-LGDRRPLLLLLGLLGLAGLLGLLLAPGSLPWLWavllgLGQGGLFPLALTLIGLRA------R 333
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16131714 341 EAKIAenktGAAMALGSFIGYAPAMFCFSLYGYILDLNPgiiGYKIVFGIMACFAFSGAVVSVMLVKR 408
Cdd:COG2807 334 TPAEA----AALSGMAQSVGYLLAALGPLLVGALHDATG---SWTAALLLLAALAVLMLVAGLLAGRP 394
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
34-263 5.72e-07

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 51.07  E-value: 5.72e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17329  26 LHQQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTGFGGGLF 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 114 nWPVLLKSVSRLGNSEQQGRLFGFFETGRGIvdtVVAFSALAvftwfGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17329 106 -EPASEAMIADVTTPENRTRAFSLLYWAINL---GVAIGPLL-----GGLLLLYSFRLLFLAAAVLFLLAALVLLFLLPE 176
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714 194 EAPSVEVKKEDGASKntSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIIN 263
Cdd:cd17329 177 TRPKRRAAEKTEILR--GYKIVLRDRAFLLFLLASFLISLIYFQLESTLPvYVVEILGLGESLLGLLLALN 245
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
38-359 8.86e-07

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 50.71  E-value: 8.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLT-TMPGYWGILFVWALFGVTcdMMNWP 116
Cdd:cd17341  29 LGLSTSQIGLLVAIPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLLIPLLALAlAVSSYWGLLVLGFLLGFA--GANFA 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 117 VLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTW--FGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDkee 194
Cdd:cd17341 107 SGQPWASFWFPKEKIGGAAGGIAGAGNMGVAVSQLLAPLIAGAivFDGGFVGWRNAFFVPGILLAIAAVLVLLFGDD--- 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 195 apsVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGiinqYCLKMIGG- 272
Cdd:cd17341 184 ---LPTGKASALEFLKVQLAVLKNYRTWILSLLYGVTFGSFVGFSNVLPtYFKTRFGLPLVTAGILA----ALFPLAGAl 256
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 273 --PIGGMISDKIlkSPSKYLCYTFIISTAALVLLIMLPHES---------MPVYLGMACTLGFGAIVFTQRAVFFAPIGe 341
Cdd:cd17341 257 arPAGGWLSDRF--GGRRRLWWLFIVMTIGAALLSLSLPTSgtnlvlflaLFVALGLGAGAGNGSVFRMVPFIFRRELG- 333
                       330
                ....*....|....*...
gi 16131714 342 akIAENKTGAAMALGSFI 359
Cdd:cd17341 334 --AVTGLVGAIGGLGGFF 349
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
34-401 3.24e-06

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 48.72  E-value: 3.24e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17474  25 IAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGL 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 114 NwPVLLKSVSRLGNSEQQGRLFGFFETGRGIvdTVVAFSALAvftwfgsGLLGfkAGIWFYSLIVIAVGIIIFFVLNDKE 193
Cdd:cd17474 105 G-PLALTLIGDLFEGGERAKAMGLYEAALGL--GIAVGPLLG-------GLLA--AISWRYPFFLLAALIPVAFLAILFL 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 194 EAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPF-LKNIYLLPVALVGAYgiinqYCLKMIGG 272
Cdd:cd17474 173 LPEPKEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLYFFLYFAFLTYLPFlLELLYGISPIIIGLL-----FAGWSVLL 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 273 PIGGMISDKILK---SPSKYLCYTFIISTAALVLLIMLPHesmpVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKt 349
Cdd:cd17474 248 ALGSLFVGRLLKkrfGARRILVIGLLLYALSLLLLGFVPS----LALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEER- 322
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|..
gi 16131714 350 GAAMALGSFIGYAPAMFCFSLYGYILdlnpGIIGYKIVFGIMACFAFSGAVV 401
Cdd:cd17474 323 GTASSLYNFVRFLGQAVGPLLFGLLL----EIFGLSAPFLVGAAIALAAAVL 370
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
38-406 4.75e-06

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 48.36  E-value: 4.75e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNwPV 117
Cdd:cd17489  26 LGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFT-TA 104
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 118 LLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGfkagiwFYSLIVIAVGIIIFFVLNDKEEAPS 197
Cdd:cd17489 105 AATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLF------IVAAVLALLALLLVFLVKDPPPVAA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 198 VEVKKEDGASKNtsmtsvLKDKTIWLIAFNVFFVYAVYCGLTFFIPflknIYL--LPVALVGAYGIINQYCLkMIGGPIG 275
Cdd:cd17489 179 EEAEAGTRAFRR------LVEKKVLPPALILFLASIAYGAISTFLP----LYAaeRGISNAGLFFTVYAIAL-LLSRPFS 247
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 276 GMISDKILKSPSKYLCYTFIIstAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFapigeAKIAENKTGAAMAL 355
Cdd:cd17489 248 GKLSDRKGPKTVIIPGLLLLA--LGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAV-----DLVPPHRRGAANGT 320
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|.
gi 16131714 356 gSFIGYAPAMfcfSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLV 406
Cdd:cd17489 321 -FFIFFDLGI---GLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYIFLL 367
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
34-144 2.51e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 46.12  E-value: 2.51e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMM 113
Cdd:COG2814 234 LQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGF-GFGL 312
                        90       100       110
                ....*....|....*....|....*....|.
gi 16131714 114 NWPVLLKSVSRLGNSEQQGRLFGFFETGRGI 144
Cdd:COG2814 313 LFPLLQALVAELAPPEARGRASGLYNSAFFL 343
uhpT PRK09556
hexose-6-phosphate:phosphate antiporter;
34-238 4.59e-05

hexose-6-phosphate:phosphate antiporter;


Pssm-ID: 236564 [Multi-domain]  Cd Length: 467  Bit Score: 45.42  E-value: 4.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLL----GVYLTTMPGYWGILFV-WALFGV 108
Cdd:PRK09556  55 MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICmlgfGASLGSGSVSLGLMIAlWALSGF 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  109 TcDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAfsALAVF---TWFGSGLLGFkagIWFYSLIVIAVGIII 185
Cdd:PRK09556 135 F-QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAG--GVALWganYFFDGHVIGM---FIFPSIIALIIGFIG 208
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16131714  186 FFV---------LNDKEEAPSVEVKKEDGASKNTSMTS-------VLKDKTIWLIAFNVFFVYAVYCGL 238
Cdd:PRK09556 209 LRYgsdspeelgWGKAEEIFGEPISEEDKETESTDMTKwqifveyVLKNPVIWLLCFANIFLYIVRIGI 277
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
34-403 6.48e-05

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 44.62  E-value: 6.48e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATgLLGVYLTTMPGYWGILFVWALFGVTCDMM 113
Cdd:cd17333  22 LEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLI-SLALALIFATPSIYLFVVLMFLAGLGAGI 100
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 114 NWPVLLKSVSRLGNSEQQGRLF---GFFETGrgivdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLn 190
Cdd:cd17333 101 LDTGANTFVGALFEESSATRLNvlhGFFGLG--------ALIGPLIATSLLTSELSWSWAYLIIGLIYLLLAILILLTL- 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 191 dKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFF-VYAVYCGLTFFIPFLKNIYLLPVALVGaYGIINQYCLKM 269
Cdd:cd17333 172 -FPELPSARNPQQSVGAFSASASRLLRNPSIILGALALFLyVGAETAFSSWVPSYLVEKKHVSDGLAG-YLLSGFWVGIT 249
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 270 IGGPIGGMISDKILksPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFfapigeAKIAENKT 349
Cdd:cd17333 250 IGRLLGGPISRRIK--PHTLLVLSGSGALLGLLILLLAPTLVVGLVATALLGLFMAALFPTILSLG------ISNLPYAK 321
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....
gi 16131714 350 GAAMALGSFIGYAPAMFCFSLYGYILDlnpgIIGYKIVFGIMACFAFSGAVVSV 403
Cdd:cd17333 322 GKGTSVLLAAGSIGGAIIPFIMGFIAE----AVGIQTAMLLITILYAIIFVLAL 371
2A0108 TIGR00886
nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]
38-326 8.30e-05

nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]


Pssm-ID: 273322 [Multi-domain]  Cd Length: 354  Bit Score: 44.21  E-value: 8.30e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714    38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATG--LLGVYLTTMPgYWGILFVWALFGVTcdMMNW 115
Cdd:TIGR00886  32 LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDIFGPRYTTALSLLLLAipCLWAGLAVQS-YSVLLLIRLFIGIA--GGSF 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   116 PVLLKSVSRLGNSEQQGRLFGfFETGRGIVDTVVAF---SALAVFTWFGSGLLGFKAGIWFYSL----IVIAVGIIIFFV 188
Cdd:TIGR00886 109 ASCMPWISFFFPKKIQGTALG-LAAGWGNMGGGVAQfvmPPIIGSLIFGGGQPAHLAWGWAFVIvpagILLLPALLIFFV 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   189 LNDKEEApsvevKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINQYcL 267
Cdd:TIGR00886 188 GADTPPG-----KPATGKLSFKEALKVFGNRHTWILALLYSVTFGSFLGVSSIFAmLFKDQFGLSKVQAGAYASLGGF-L 261
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16131714   268 KMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLG--MACTLGFGA 326
Cdd:TIGR00886 262 GSLARPAGGAISDRLGGARKLLMNFLGVAMGAFLVVLGLVSDGSLAAFIVlfVALFFFAGA 322
PRK11663 PRK11663
glucose-6-phosphate receptor/MFS transporter UhpC;
61-324 1.18e-04

glucose-6-phosphate receptor/MFS transporter UhpC;


Pssm-ID: 183266 [Multi-domain]  Cd Length: 434  Bit Score: 43.93  E-value: 1.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714   61 FLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWAL------FGvtcdmmnWPVLLKSVSRLGNSEQQGRL 134
Cdd:PRK11663  76 FVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLnaffqgWG-------WPVCAKLLTAWYSRTERGGW 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  135 FGFFET----GRGIVDTVVAFSALAvftwfgsglLGFKAGIWFYSLIVIAVGIIIFFVLNDKEEA---PSV--------E 199
Cdd:PRK11663 149 WAIWNTahnvGGALIPLVVGAIALH---------YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAmglPSVgewrhdalE 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  200 VKKE-DGAS---KNTSMTSVLKDKTIWLIAFNVFFVYAVYCGltffIPFLKNIYL---LPVALVGAYGIINQYclkMIGG 272
Cdd:PRK11663 220 LAQQqEGAGlsrKEILTKYVLLNPYIWLLSFSYVLVYVVRAA----INDWGNLYMsetLGVDLVTANSAVSMF---ELGG 292
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  273 PIGGMI----SDKILKSPSKYLCYTFII----STAALVLlimLPHESMPVYLGMACTLGF 324
Cdd:PRK11663 293 FIGALVagwgSDKLFNGNRGPMNLIFAAgillSVGSLWL---MPFASYVMQAACFFTIGF 349
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
38-393 7.19e-04

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 41.43  E-value: 7.19e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  38 FHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVtCDMMNWPV 117
Cdd:cd17316  31 LGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGI-GIGGEYPG 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 118 LLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLgfkagiWFYSLIVIAVGIIIFFVLNdkeeaps 197
Cdd:cd17316 110 ASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDWG------WRILFLIGALPALLALLLR------- 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 198 vevkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNIYLLPVALVGAYGIINqYCLKMIGGPIGG 276
Cdd:cd17316 177 ---------------------RRTLLLILLWFFISFGYYGLTTFLPtYLQTVLGLSPATSSLYLLLI-SLGALVGALIAG 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 277 MISDKILKSPSkYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALG 356
Cdd:cd17316 235 LLSDRIGRKKT-LVIGLILSGILALPLFYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLG 313
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 16131714 357 SFI-GYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMAC 393
Cdd:cd17316 314 RLGgGGAPPLIALLLASTGGTGVPALILALLAIVALIV 351
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
34-328 1.51e-03

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 40.70  E-value: 1.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTngqiGNAMSVNSFVTTVGFFL----SIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVt 109
Cdd:cd17327  32 MKEDLKLV----GNQYNWGNTVFYVGYIIfelpGNLLLQRFPPSKWLSVFIVLWGLLTLLTAAVKNFGGLIALRFFLGL- 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 110 CDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGllGFKAGIWFY---SLIVIAVGIIIF 186
Cdd:cd17327 107 FESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKILGVG--GLAGWRWLFiieGLITIIIGLVIF 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 187 FV----------LNDKEEAPSVEVKKEDGASKNTSMTS------VLKDKTIWLIAFNVFFVYAVYCGLTFFIP-FLKNI- 248
Cdd:cd17327 185 FWlpdnpskawfLTEEEKELAVERLRANQTGKGDQKFKwkqikeAFKDPRTWLLFLFFFCSQITNNGISNFLPlILKSLg 264
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 249 -YLLPVALVGAYGiinqYCLKMIGGPIGGMISDKIlksPSKYLCYTF--IISTAALVLLIMLPHESMPVYLGMACTLGFG 325
Cdd:cd17327 265 fYSLQTNLLSVPI----GALGAVSLLIAALLSDRF---KKRGLFAIFacVLALVGSIILLAAPNPPGAYFAAYILGGGSY 337

                ...
gi 16131714 326 AIV 328
Cdd:cd17327 338 AGF 340
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
122-401 1.83e-03

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 40.22  E-value: 1.83e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 122 VSRLGNSEQQGRLFGFFETGrgivDTVVAF-SALAVFTWFGSGLLGFKAGIWFYSLI-VIAVGIIIFFVLNDKeeapsve 199
Cdd:cd17370 113 LADATPPSGRGKAFGLHRAL----DTLGAVlGPLLAALLLYLLGGNYRTIFLLAAIPaLLALLILLFVVKEYP------- 181
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 200 vKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINqyCLKMIGGPIGGMIS 279
Cdd:cd17370 182 -RPPKLRKKSKKTSLKKLPKAFWLYLLAVALFALGNFSFAFLILRAQELGLSAALIPLLYALFN--LVYALAAYPAGRLS 258
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 280 DKILKspsKYLCYTFIISTAALVLLIMLPHESMPVYLGMACtlgFGAIVFTQRAVFFAPIGEAKIAENKtgaAMALGSF- 358
Cdd:cd17370 259 DRIGR---KKLLILGYLSLALAYLGFALGSSLWLLLLGFIL---WGLYMGAQESIERAAVADLVPAELR---GTAYGLFn 329
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 16131714 359 IGYAPAMFCFSL-YGYILDLnpgiIGYKIVFGIMACFAFSGAVV 401
Cdd:cd17370 330 TVVGIGWLLASLiAGYLWDL----ISPSAAFLFSAVLALIALLL 369
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
31-318 2.93e-03

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 39.53  E-value: 2.93e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  31 YIPMQEYFHLTNGQIGNAMSVNSFVTTVgffLSI---YFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFG 107
Cdd:cd17328  22 LPDIQSDFLIDDSLAGLLQTVFIISYMV---LSPifgYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVG 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 108 V---TCDmmnwPVLLKSVSRLGNSEQQGRLFGFFetgrGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGII 184
Cdd:cd17328  99 IgeaSYS----PIAPTIIADLFPKEKRTRALGVF----YFAIPLGSGLGYVVGGLVAQATGGWRWAFRVTGVLGVLLAIL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 185 IFFVLNDKEEAPSVEVKKEDGASKN--TSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVA-----LVG 257
Cdd:cd17328 171 LLLFVREPPRGAAEGGVMAKSTATSflADLKALAKNPSFILSTLGFTAVSFVTGALAFWAPTFFLRAFGVGDlssadVGL 250
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16131714 258 AYGIINQYClKMIGGPIGGMISDKILKSPSK---YLC-YTFIISTAALVLLIMLPHESMPVYLGM 318
Cdd:cd17328 251 IFGAITCIA-GVLGVLLGGILADRLRRKTPRadpLVCaVGLLAAAPFLFLALVLALSNLLLAWVL 314
MFS_UhpC cd17488
Membrane sensor protein UhpC of the Major Facilitator Superfamily of transporters; Membrane ...
40-285 3.71e-03

Membrane sensor protein UhpC of the Major Facilitator Superfamily of transporters; Membrane sensor protein UhpC acts as both a sensor and a transport protein. It is part of the UhpABC signaling cascade that controls the expression of the hexose phosphate transporter UhpT. UhpC recognizes external glucose-6-phosphate (Glc6P) and induces transport by UhpT. It can also transport and sense Glc6P, and interacts with the histidine kinase UhpB, leading to the stimulation of the autokinase activity of UhpB. This group also includes the hexose phosphate transport protein UhpT from Chlamydia pneumoniae; it is a transport protein for sugar phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The UhpC group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341041 [Multi-domain]  Cd Length: 364  Bit Score: 39.31  E-value: 3.71e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  40 LTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTcDMMNWPVLL 119
Cdd:cd17488  35 LDKSDIGILGSLFYITYGVSKFVSGLMSDRSNPRYFMGIGLIATGIINILFGFSSSLWAFAVLWTLNAFF-QGWGWPPCA 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 120 KSVSRLGNSEQQGRLFGFFETGRGIvdtvvAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKEeapsve 199
Cdd:cd17488 114 RLLTHWYSRNERGFWWSIWNTSHNI-----GGALIPILTGFAALTYGWRAGMYVPGIIAILMGIVLCWRLRDRP------ 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714 200 vkkedgaskntsmtsvlkdKTIWLIAFNVFFVYAVYCGLTFFipflKNIYL---LPVALVGAYGIINQYCL-KMIGGPIG 275
Cdd:cd17488 183 -------------------PYIWLLAFCYVLVYVVRTAINDW----GNLYLsetHGYSLVKANSAVSLFEVgGLIGALVA 239
                       250
                ....*....|
gi 16131714 276 GMISDKILKS 285
Cdd:cd17488 240 GWGSDKLFKG 249
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
34-138 3.81e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 39.09  E-value: 3.81e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131714  34 MQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTM--SFSLIATGLLGvyLTTMPGYWGILFVWALFGVTCD 111
Cdd:cd17473 224 LQERGGGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLaiGFALMALGFLL--LALASGLWVVLLGAILAGLGFG 301
                        90       100
                ....*....|....*....|....*..
gi 16131714 112 MMNwPVLLKSVSRLGNSEQQGRLFGFF 138
Cdd:cd17473 302 LLL-PTLNSWAMSLVPPELRGRAMGIV 327
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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