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Conserved domains on  [gi|16131983|ref|NP_418582|]
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DUF2645 domain-containing inner membrane protein YjeO [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

YjeO family protein( domain architecture ID 10566796)

YjeO family protein is a DUF2645 domain-containing protein; similar to Escherichia coli inner membrane protein YjeO

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2645 pfam10840
Protein of unknown function (DUF2645); This family of proteins appear to be restricted to ...
 6-103 3.37e-38

Protein of unknown function (DUF2645); This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.


:

Pssm-ID: 431518  Cd Length: 98  Bit Score: 123.28  E-value: 3.37e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131983     6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATA 85
Cdd:pfam10840   1 FILCVIYFIFAALVIYLTSILDYEWMIDGGDIKNICDVPRELPEDDSRDFFVIMALPLFIPFFYFTVKKRFKSAFLYVIA 80

                          90
                  ....*....|....*...
gi 16131983    86 LAIFGYWLWQFFLRYQFC 103
Cdd:pfam10840  81 LAIFGYWGWRFFIRFQFC 98
 
Name Accession Description Interval E-value
DUF2645 pfam10840
Protein of unknown function (DUF2645); This family of proteins appear to be restricted to ...
 6-103 3.37e-38

Protein of unknown function (DUF2645); This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.


Pssm-ID: 431518  Cd Length: 98  Bit Score: 123.28  E-value: 3.37e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131983     6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATA 85
Cdd:pfam10840   1 FILCVIYFIFAALVIYLTSILDYEWMIDGGDIKNICDVPRELPEDDSRDFFVIMALPLFIPFFYFTVKKRFKSAFLYVIA 80

                          90
                  ....*....|....*...
gi 16131983    86 LAIFGYWLWQFFLRYQFC 103
Cdd:pfam10840  81 LAIFGYWGWRFFIRFQFC 98
 
Name Accession Description Interval E-value
DUF2645 pfam10840
Protein of unknown function (DUF2645); This family of proteins appear to be restricted to ...
 6-103 3.37e-38

Protein of unknown function (DUF2645); This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.


Pssm-ID: 431518  Cd Length: 98  Bit Score: 123.28  E-value: 3.37e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16131983     6 FVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATA 85
Cdd:pfam10840   1 FILCVIYFIFAALVIYLTSILDYEWMIDGGDIKNICDVPRELPEDDSRDFFVIMALPLFIPFFYFTVKKRFKSAFLYVIA 80

                          90
                  ....*....|....*...
gi 16131983    86 LAIFGYWLWQFFLRYQFC 103
Cdd:pfam10840  81 LAIFGYWGWRFFIRFQFC 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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