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Conserved domains on  [gi|16751921|ref|NP_444513|]
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dermcidin isoform 1 preproprotein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-97 8.18e-48

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


:

Pssm-ID: 405879  Cd Length: 84  Bit Score: 147.69  E-value: 8.18e-48
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16751921    19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKG 97
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKA 79
 
Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-97 8.18e-48

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


Pssm-ID: 405879  Cd Length: 84  Bit Score: 147.69  E-value: 8.18e-48
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16751921    19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKG 97
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKA 79
 
Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-97 8.18e-48

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


Pssm-ID: 405879  Cd Length: 84  Bit Score: 147.69  E-value: 8.18e-48
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16751921    19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKG 97
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKA 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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