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Conserved domains on  [gi|25143453|ref|NP_490815|]
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G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

Protein Classification

G-protein coupled receptor( domain architecture ID 11535993)

G-protein coupled receptor transmits physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
27-287 5.90e-15

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


:

Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 73.48  E-value: 5.90e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  27 LALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLqdSNMLCRIQ--- 103
Cdd:cd00637   1 LAVLYILIFVVGLVGNLLVILVILRNRRLRT-VTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWF--GDALCKLLgfl 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 104 --VSITVTVWTVIAM-MNLCIAGVHlltfaRIHYEQLFGLTPTKLCI-LSWIISWLLSLPSLTNGHVAIYGPAVRTC-VF 178
Cdd:cd00637  78 qsVSLLASILTLTAIsVDRYLAIVH-----PLRYRRRFTRRRAKLLIaLIWLLSLLLALPPLLGWGVYDYGGYCCCClCW 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 179 SHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGL---------YKSRFLVYFFLLGPLYA---LPF 246
Cdd:cd00637 153 PDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSnssrrrrrrRERKVTKTLLIVVVVFLlcwLPY 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 25143453 247 YILTALDPSDPVRMSQDTLWTIGCTMFAFVPCIIAPLLYGA 287
Cdd:cd00637 233 FILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAF 273
 
Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
27-287 5.90e-15

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 73.48  E-value: 5.90e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  27 LALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLqdSNMLCRIQ--- 103
Cdd:cd00637   1 LAVLYILIFVVGLVGNLLVILVILRNRRLRT-VTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWF--GDALCKLLgfl 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 104 --VSITVTVWTVIAM-MNLCIAGVHlltfaRIHYEQLFGLTPTKLCI-LSWIISWLLSLPSLTNGHVAIYGPAVRTC-VF 178
Cdd:cd00637  78 qsVSLLASILTLTAIsVDRYLAIVH-----PLRYRRRFTRRRAKLLIaLIWLLSLLLALPPLLGWGVYDYGGYCCCClCW 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 179 SHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGL---------YKSRFLVYFFLLGPLYA---LPF 246
Cdd:cd00637 153 PDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSnssrrrrrrRERKVTKTLLIVVVVFLlcwLPY 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 25143453 247 YILTALDPSDPVRMSQDTLWTIGCTMFAFVPCIIAPLLYGA 287
Cdd:cd00637 233 FILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAF 273
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
63-285 1.67e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 51.53  E-value: 1.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453    63 FIGHLCFTNL-IALLVLVPVIIHNVFTGVNLLqdSNMLCRIQVSITVTVWTVIAMMNLCIAgV--HLLTFARIHYEQLFG 139
Cdd:pfam00001  22 FLLNLAVADLlFSLLTLPFWLVYYLNHGDWPF--GSALCKIVGALFVVNGYASILLLTAIS-IdrYLAIVHPLRYKRRRT 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453   140 LTPTK-LCILSWIISWLLSLPSLTNG-HVAIYGPAVRTCVF---SHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:pfam00001  99 PRRAKvLILVIWVLALLLSLPPLLFGwTLTVPEGNVTVCFIdfpEDLSKPVSYTLLISVLGFLLPLLVILVCYTLIIRTL 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453   215 FHSPIVFQSLGLYKSR----------FLVYFFLLGPLYAlpFYILTALDPSDPVRMSQDTLWTIgCTMFAFVPCIIAPLL 284
Cdd:pfam00001 179 RKSASKQKSSERTQRRrkalktlavvVVVFILCWLPYHI--VNLLDSLALDCELSRLLDKALSV-TLWLAYVNSCLNPII 255

                  .
gi 25143453   285 Y 285
Cdd:pfam00001 256 Y 256
 
Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
27-287 5.90e-15

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 73.48  E-value: 5.90e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  27 LALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLqdSNMLCRIQ--- 103
Cdd:cd00637   1 LAVLYILIFVVGLVGNLLVILVILRNRRLRT-VTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWF--GDALCKLLgfl 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 104 --VSITVTVWTVIAM-MNLCIAGVHlltfaRIHYEQLFGLTPTKLCI-LSWIISWLLSLPSLTNGHVAIYGPAVRTC-VF 178
Cdd:cd00637  78 qsVSLLASILTLTAIsVDRYLAIVH-----PLRYRRRFTRRRAKLLIaLIWLLSLLLALPPLLGWGVYDYGGYCCCClCW 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 179 SHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGL---------YKSRFLVYFFLLGPLYA---LPF 246
Cdd:cd00637 153 PDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSnssrrrrrrRERKVTKTLLIVVVVFLlcwLPY 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 25143453 247 YILTALDPSDPVRMSQDTLWTIGCTMFAFVPCIIAPLLYGA 287
Cdd:cd00637 233 FILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAF 273
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
26-288 7.08e-11

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 61.42  E-value: 7.08e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDSnmLCRIQVS 105
Cdd:cd14967   1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRT-VTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPV--LCRFWIA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 106 ITVtVWTVIAMMNLCIAGV--HLLTFARIHYEQLFGLTPTKLCILS-WIISWLLSLPSLTNGHVAIYGPAV-RTCVFSHS 181
Cdd:cd14967  78 LDV-LCCTASILNLCAISLdrYLAITRPLRYRQLMTKKRALIMIAAvWVYSLLISLPPLVGWRDETQPSVVdCECEFTPN 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 182 DSglkFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGLyksrfLVYFFLLGplyALPFYILTALDPSDPVRMS 261
Cdd:cd14967 157 KI---YVLVSSVISFFIPLLIMIVLYARIFRVARRELKAAKTLAI-----IVGAFLLC---WLPFFIIYLVSAFCPPDCV 225
                       250       260
                ....*....|....*....|....*..
gi 25143453 262 QDTLWTIgCTMFAFVPCIIAPLLYGAS 288
Cdd:cd14967 226 PPILYAV-FFWLGYLNSALNPIIYALF 251
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
26-286 1.18e-08

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 55.30  E-value: 1.18e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLqdSNMLCRI--- 102
Cdd:cd15203   2 ILILLYGLIIVLGVVGN-LLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPFTLIYTLTKNWPF--GSILCKLvps 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 103 --QVSITVTVWTVIAmmnlcIAGVHLLTFARIHYEQLFGLTPTKLCILSWIISWLLSLP-----SLTNGHVAIYGPAVRT 175
Cdd:cd15203  79 lqGVSIFVSTLTLTA-----IAIDRYQLIVYPTRPRMSKRHALLIIALIWILSLLLSLPlaifqELSDVPIEILPYCGYF 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 176 CV--FSHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGLYKSRF-------------------LVY 234
Cdd:cd15203 154 CTesWPSSSSRLIYTISVLVLQFVIPLLIISFCYFRISLKLRKRVKKKRGKRTLSSRRrrselrrkrrtnrlliamvVVF 233
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 25143453 235 FFLLGPLYAlpFYILTALDPSDPVRMSQDTLWTIGCTMFAFVPCIIAPLLYG 286
Cdd:cd15203 234 AVCWLPLNL--FNLLRDFEPLPQIDGRHFYLIFLICHLIAMSSACVNPLLYG 283
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
63-285 1.67e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 51.53  E-value: 1.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453    63 FIGHLCFTNL-IALLVLVPVIIHNVFTGVNLLqdSNMLCRIQVSITVTVWTVIAMMNLCIAgV--HLLTFARIHYEQLFG 139
Cdd:pfam00001  22 FLLNLAVADLlFSLLTLPFWLVYYLNHGDWPF--GSALCKIVGALFVVNGYASILLLTAIS-IdrYLAIVHPLRYKRRRT 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453   140 LTPTK-LCILSWIISWLLSLPSLTNG-HVAIYGPAVRTCVF---SHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:pfam00001  99 PRRAKvLILVIWVLALLLSLPPLLFGwTLTVPEGNVTVCFIdfpEDLSKPVSYTLLISVLGFLLPLLVILVCYTLIIRTL 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453   215 FHSPIVFQSLGLYKSR----------FLVYFFLLGPLYAlpFYILTALDPSDPVRMSQDTLWTIgCTMFAFVPCIIAPLL 284
Cdd:pfam00001 179 RKSASKQKSSERTQRRrkalktlavvVVVFILCWLPYHI--VNLLDSLALDCELSRLLDKALSV-TLWLAYVNSCLNPII 255

                  .
gi 25143453   285 Y 285
Cdd:pfam00001 256 Y 256
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
26-218 1.47e-06

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 48.83  E-value: 1.47e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDSnmLCRI--- 102
Cdd:cd15096   2 VVPVIFGLIFIVGLIGNSLVILVVLSNQQMRS-TTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDV--WCKIvqy 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 103 --QVSITVTVWTVIAM-MNLCIAGVHLLTFARIHYEQlfglTPTKLCILSWIISWLLSLPSLTNGHVAIYG---PAVRTC 176
Cdd:cd15096  79 lvYVTAYASVYTLVLMsLDRYLAVVHPITSMSIRTER----NTLIAIVGIWIVILVANIPVLFLHGVVSYGfssEAYSYC 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 25143453 177 VFS--HSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSP 218
Cdd:cd15096 155 TFLteVGTAAQTFFTSFFLFSYLIPLTLICVLYMLMLRRLRRQK 198
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
26-209 1.87e-05

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 45.33  E-value: 1.87e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDSnmLCRIqvs 105
Cdd:cd15210   2 FAAVWGIVFMVVGVPGNLLTVLALLRSKKLRT-RTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGET--LCRV--- 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 106 ITVTVWTVIAMMNLCIAGVHLLTFARIHYEQLFGLTPTKLCI-----LSWIISWLLSLPsLTNGHVAIYG--PAVRTCVF 178
Cdd:cd15210  76 FPLLRYGLVAVSLLTLVLITLNRYILIAHPSLYPRIYTRRGLalmiaGTWIFSFGSFLP-LWLGIWGRFGldPKVCSCSI 154
                       170       180       190
                ....*....|....*....|....*....|.
gi 25143453 179 SHSDSGLKFLTYTMIFGVFIPALFSSIAYFR 209
Cdd:cd15210 155 LRDKKGRSPKTFLFVFGFVLPCLVIIICYAR 185
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
26-214 4.43e-05

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 44.58  E-value: 4.43e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLVPviihnvFTGVNLLQDS----NMLCR 101
Cdd:cd15095   2 LVPLIFAIIFLVGLAGN-SLVIYVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVP------FTAALYATPSwvfgDFMCK 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 102 -----IQVSITVTVWTVIAM-MNLCIAGVHLLTfARIHYEQLFGLTptkLCILSWIISWLLSLPSLTN-GHVAIYGPAVR 174
Cdd:cd15095  75 fvnymMQVTVQATCLTLTALsVDRYYAIVHPIR-SLRFRTPRVAVV---VSACIWIVSFLLSIPVAIYyRLEEGYWYGPQ 150
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 25143453 175 T-C--VFSHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:cd15095 151 TyCreVWPSKAFQKAYMIYTVLLTYVIPLAIIAVCYGLILRRL 193
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
26-223 7.86e-05

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 43.80  E-value: 7.86e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNLIALLVLVPviihnvFTGVNLLQDS----NMLCR 101
Cdd:cd15927   2 VVPILFALIFLVGVLGNGTLILIFLRNKSMRN-VPNIFILSLALGDLLLLLTCVP------FTSTIYTLDSwpfgEFLCK 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 102 IQ-----VSITVTVWTVIAMMnlciagvHLLTFARIHYEQLFGLTPTKLCILS----WIISWLLSLPSLTNGHVA-IYGP 171
Cdd:cd15927  75 LSeflkdTSIGVSVFTLTALS-------ADRYFAIVNPMRKHRSQATRRTLVTaasiWIVSILLAIPEAIFSHVVtFTLT 147
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 25143453 172 AVRTCVFSHSD------------SGLKFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQS 223
Cdd:cd15927 148 DNQTIQICYPYpqelgpnypkimVLLRFLVYYLIPLLIIGVFYVLMARHLIRSTRNIGSGQNQA 211
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
26-222 1.13e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 43.36  E-value: 1.13e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLqdSNMLCRI--- 102
Cdd:cd14993   2 VLIVLYVVVFLLALVGN-SLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVF--GEVLCKAvpy 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 103 --QVSITVTVWTVIAM-MNLCIAGVHLLTFARIhyeqlFGLTPTKLCILS-WIISWLLSLPSL------TNGHVAIYGPA 172
Cdd:cd14993  79 lqGVSVSASVLTLVAIsIDRYLAICYPLKARRV-----STKRRARIIIVAiWVIAIIIMLPLLvvyeleEIISSEPGTIT 153
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 25143453 173 VRTCVFSHSDSGLKFLTYTMIFGV--FIPALFSSIAYFRILQTLFHSPIVFQ 222
Cdd:cd14993 154 IYICTEDWPSPELRKAYNVALFVVlyVLPLLIISVAYSLIGRRLWRRKPPGD 205
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
26-214 7.34e-04

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 40.65  E-value: 7.34e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDsnMLCRIQvS 105
Cdd:cd14969   2 VLAVYLSLIGVLGVVLN-GLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGD--PGCVIY-G 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 106 ITVTVWTVIAMMNL-------CIAGVHLLTFARIHYEQLFgltptKLCILSWIISWLLSLPSLTNGHVAIYGPAVRTC-- 176
Cdd:cd14969  78 FAVTFLGLVSISTLaalaferYLVIVRPLKAFRLSKRRAL-----ILIAFIWLYGLFWALPPLFGWSSYVPEGGGTSCsv 152
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 25143453 177 -VFSHSDSGLKFLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:cd14969 153 dWYSKDPNSLSYIVSLFVFCFFLPLAIIIFCYYKIYRTL 191
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
26-254 2.16e-03

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 39.19  E-value: 2.16e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNfISSRFIGHLCFTNL-IALLVLVPVIIHNVFTGVNLLQDsnmLCRIQV 104
Cdd:cd15330   2 ITSLFLGTLILCAIFGNACVVAAIALERSLQN-VANYLIGSLAVTDLmVSVLVLPMAALYQVLNKWTLGQV---TCDLFI 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 105 SITVTVWTViAMMNLCIAGVHLLTFARIHYEQLFGLTPTKLCIL---SWIISWLLSLPSLTNGHVAIYGPAVRTCVFShS 181
Cdd:cd15330  78 ALDVLCCTS-SILHLCAIALDRYWAITDPIDYVNKRTPRRAAVLislTWLIGFSISIPPMLGWRTPEDRSDPDACTIS-K 155
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 25143453 182 DSGlkFLTYTMIFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGLYKSRFLVYFfllgplyaLPFYILTALDP 254
Cdd:cd15330 156 DPG--YTIYSTFGAFYIPLILMLVLYGRIFKAAARERKTVKTLGIIMGTFILCW--------LPFFIVALVLP 218
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
26-218 2.38e-03

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 38.99  E-value: 2.38e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLVP------VIIHNVFtgvnllqdSNML 99
Cdd:cd14971   2 IVPLFFALIFLLGLVGN-SLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPftatiyPLPGWVF--------GDFM 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 100 CR-----IQVSITVTVWTVIAM-MNLCIAGVHLLTFARIHYEQLFGLtpTKLCIlsWIISWLLSLPSLTNGHVAIYGPAV 173
Cdd:cd14971  73 CKfvhyfQQVSMHASIFTLVAMsLDRFLAVVYPLRSLHIRTPRNALA--ASGCI--WVVSLAVAAPVLALHRLRNYTPGN 148
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 25143453 174 RT-CVFSHSDSGLK--FLTYTMIFGVFIPALFSSIAYFRILQTLFHSP 218
Cdd:cd14971 149 RTvCSEAWPSRAHRraFALCTFLFGYLLPLLLICVCYAAMLRHLWRVA 196
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
30-286 2.55e-03

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 38.90  E-value: 2.55e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  30 IFTIICIIGVIGNAsLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLvPVIIHNVFTGVNLLQdSNMLCR-----IQV 104
Cdd:cd14985   6 LYIAIFLVGLLGNL-FVVWVFLFPRGPKRVADIFIANLAAADLVFVLTL-PLWATYTANQYDWPF-GAFLCKvssyvISV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 105 SITVTVWTVIAM-MNLCIAGVHLLTFARIHYEQLFGLTptklCILSWIISWLLSLPSLTNGHV-AIYGPAVRTCVFSHSD 182
Cdd:cd14985  83 NMFASIFLLTCMsVDRYLAIVHPVASRRLRRRRQARVT----CALIWVVACLLSLPTFLLRSLqAIENLNKTACIMLYPH 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 183 SGLKFLTYTM--IFGVFIPALFSSIAYFRILQTLFHSPIVFQSLGLYKSRFLVYFFLLGPLYA---LPFYILTALDPSDP 257
Cdd:cd14985 159 EAWHFGLSLElnILGFVLPLLIILTCYFHIARSLRKRYERTGKNGRKRRKSLKIIFALVVAFLvcwLPFHFFKFLDFLAQ 238
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 25143453 258 VRMSQDTLWTIG-------CTMFAFVPCIIAPLLYG 286
Cdd:cd14985 239 LGAIRPCFWELFldlglpiATCLAFTNSCLNPFIYV 274
7tmA_ACKR4_CCR11 cd15176
atypical chemokine receptor 4, member of the class A family of seven-transmembrane G ...
27-218 2.74e-03

atypical chemokine receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; ACKR4 was first reported to bind several CC chemokines including CCL19, CCL21, and CCL25 and was originally designated CCR11. AKCR4 is unable to couple to G-protein and, instead, it preferentially mediates beta-arrestin dependent processes, such as receptor internalization, after ligand binding. Thus, ACKR4 may act as a scavenger receptor to suppress the effects of proinflammatory chemokines. Unlike the classical chemokine receptors that contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 320304 [Multi-domain]  Cd Length: 276  Bit Score: 38.96  E-value: 2.74e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  27 LALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLvPVIIHNvftGVNLLQDSNMLCRIQVSI 106
Cdd:cd15176   3 LPVFYTIALVVGLAGN-SLVVAIYAYYKKLKTKTDVYILNLAVADLLLLFTL-PFWAAD---AVNGWVLGTAMCKITSAL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 107 TVTVWTVIAMMNLCIAGVHLLTFARIHYEQLFGLTPTKLCILSWIISWLLSLPSLTNGHVAIYGPAVRT-CVFSHSDSGL 185
Cdd:cd15176  78 YTMNFSCGMQFLACISVDRYVAITKATSRQFTGKHCWIVCLCVWLLAILLSIPDLVFSTVRENSDRYRClPVFPPSLVTS 157
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 25143453 186 KFLTYTMI---FGVFIPALFSSIAYFRILQTLFHSP 218
Cdd:cd15176 158 AKATIQILevlLGFVLPFLVMVFCYSRVARALSRTP 193
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
33-214 2.91e-03

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 38.90  E-value: 2.91e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  33 IICIIGVIGNASLLVYIFAKKLYQNFISSrFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDsnMLCRIQVSITV---- 108
Cdd:cd14986   9 VLFVFTLVGNGLVILVLRRKRKKRSRVNI-FILNLAIADLVVAFFTVLTQIIWEATGEWVAGD--VLCRIVKYLQVvglf 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 109 --TVWTVIAMMNLCIAGVHLLTFARIHyeqlfgLTPTKLCILSWIISWLLSLPSLTNGHVAIYGPAVRTCVFS-HSDSGL 185
Cdd:cd14986  86 asTYILVSMSLDRYQAIVKPMSSLKPR------KRARLMIVVAWVLSFLFSIPQLVIFVERELGDGVHQCWSSfYTPWQR 159
                       170       180       190
                ....*....|....*....|....*....|
gi 25143453 186 K-FLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:cd14986 160 KvYITWLATYVFVIPLIILSYCYGRILRTI 189
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
27-218 3.33e-03

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 38.73  E-value: 3.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  27 LALIFTIICIIGVIGNA-SLLVYIFAKKLYQnfISSRFIGHLCFTNLIALLVL----VPVIIHNVF-----TGVNLLQDS 96
Cdd:cd14984   3 LPVLYSLVFLLGLVGNSlVLLVLLYYRKLRS--MTDVYLLNLALADLLFVLTLpfwaVYAADGWVFgsflcKLVSALYTI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  97 NMLCRIQVSITVTVWTVIAMmnlcIAGVHLLTFARIHYEQLFgltptklCILSWIISWLLSLPSLTNGHVAIYGpAVRTC 176
Cdd:cd14984  81 NFYSGILFLACISIDRYLAI----VHAVSALRARTLLHGKLT-------CLGVWALALLLSLPEFIFSQVSEEN-GSSIC 148
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 25143453 177 VFSHSDSGLK-----FLTYTMIFGVFIPALFSSIAYFRILQTLFHSP 218
Cdd:cd14984 149 SYDYPEDTATtwktlLRLLQNILGFLLPLLVMLFCYSRIIRTLLRAR 195
7tmA_ET-AR cd15975
endothelin A (or endothelin-1) receptor, member of the class A family of seven-transmembrane G ...
26-213 6.42e-03

endothelin A (or endothelin-1) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain.


Pssm-ID: 320641 [Multi-domain]  Cd Length: 300  Bit Score: 37.92  E-value: 6.42e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLYQNFISSrFIGHLCFTNLIALLVLVPVIIHNVFTGVNLLQDSN---MLCRI 102
Cdd:cd15975   2 INTVLSCIIFIVGMVGNATLLRIIYQNKCMRNGPNA-LIASLALGDLIYIVIDIPINVYKLLAQKWPFDDSSfgvFLCKL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 103 -----QVSITVTVwtviamMNLCIAGVH----LLTFARIHYEQLFGLTPTKLcILSWIISWLLSLPSLTNGHVAIY---G 170
Cdd:cd15975  81 vpflqKASVGITV------LNLCALSVDryraVASWSRVQGIGIPLITAIEI-FSIWVLSFILAIPEAIGFVMVPFeynG 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 25143453 171 PAVRTCVFSHSDSGLKFLTYTM---IFGVFIPALFSSIAYFRILQT 213
Cdd:cd15975 154 EQYRTCMLNATTKFMNFYVDAKdwwLFGFYFCVPLACTAIFYTLMT 199
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
26-214 7.34e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 37.66  E-value: 7.34e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNaSLLVYIFAKKLYQNFISSRFIGHLCFTNLIALLVLvPVIIHNVFtgVNLLQDSNMLCRIQVS 105
Cdd:cd14970   2 VIPAVYSVVCVVGLTGN-SLVIYVILRYSKMKTVTNIYILNLAVADELFLLGL-PFLATSYL--LGYWPFGEVMCKIVLS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 106 IT-----VTVWTVIAM-MNLCIAGVHLLTfaRIHYEQLFGLTPTKLCIlsWIISWLLSLPSLTNGHVAIYGPAVRTCVFS 179
Cdd:cd14970  78 VDaynmfTSIFCLTVMsVDRYLAVVHPVK--SLRFRTPRKAKLVSLCV--WALSLVLGLPVIIFARTLQEEGGTISCNLQ 153
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 25143453 180 HSD----SGLKFLTYTMIFGVFIPALFSSIAYFRILQTL 214
Cdd:cd14970 154 WPDppdyWGRVFTIYTFVLGFAVPLLVITVCYSLIIRRL 192
7tmA_MCHR1 cd15338
melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane ...
26-255 9.00e-03

melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320460 [Multi-domain]  Cd Length: 282  Bit Score: 37.10  E-value: 9.00e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453  26 ILALIFTIICIIGVIGNASLLVYIFAKKLY--QNFISSRFIGHLCFTNLIALLVLvPVIIHNVFtGVNLLQDSNMLCRIQ 103
Cdd:cd15338   2 IMPSVFGVICFLGIIGNSIVIYTIVKKSKFrcQQTVPDIFIFNLSIVDLLFLLGM-PFLIHQLL-GNGVWHFGETMCTLI 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 104 VS------ITVTVWTVIAMMNLCIAGVHLLTFARIHyeqlfglTPtKLCILSWIISWLLSLPSLT-----NGHVAIYGPA 172
Cdd:cd15338  80 TAldtnsqITSTYILTVMTLDRYLATVHPIRSTKIR-------TP-RVAVAVICLVWILSLLSITpvwmyAGLMPLPDGS 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25143453 173 VRTCV-FSHSDSGLKFLT-YTMIFGVFIPALFSSIAYFRILQTLFHS--PIVFQSLGLYKSRF--------LVYFFLLGP 240
Cdd:cd15338 152 VGCALlLPNPETDTYWFTlYQFFLAFALPLVVICVVYFKILQNMASTvaPLPQRSLRVRTKKVtrmavaicLAFFICWAP 231
                       250
                ....*....|....*
gi 25143453 241 LYALPFYILTALDPS 255
Cdd:cd15338 232 FYILQLAHLSIDRPS 246
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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