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Conserved domains on  [gi|71982608|ref|NP_491002|]
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Amino Acid Transporter [Caenorhabditis elegans]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 6-462 3.26e-92

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 290.88  E-value: 3.26e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608     6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSI 85
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    86 AFAFMWVSVLMTYPATIAICAETFGQYLIEGLkqyyeIDDALVPT-CQKLFAYSLLFLVTWMNFFELsKFAARFQILATI 164
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPV-----FPDCEVPEwAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   165 AKLFSCMLIIGTGFYfYFVKG---WHGYlENPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLT 241
Cdd:TIGR00911 197 CKLLALLLIIITGWV-QLGKGgveSLNP-KNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIII 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   242 GISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLP 321
Cdd:TIGR00911 275 SMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLP 354

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   322 ACFSCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRHNHIPVHPdAVRVPLFCIYLF 401
Cdd:TIGR00911 355 SLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVFF 433

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 71982608   402 LAITVALVIIPIFYEFQSTALAIAICLFGFVLYYVFIHKAIFPRWLVALNKKVTLWCCILF 462
Cdd:TIGR00911 434 LLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 6-462 3.26e-92

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 290.88  E-value: 3.26e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608     6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSI 85
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    86 AFAFMWVSVLMTYPATIAICAETFGQYLIEGLkqyyeIDDALVPT-CQKLFAYSLLFLVTWMNFFELsKFAARFQILATI 164
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPV-----FPDCEVPEwAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   165 AKLFSCMLIIGTGFYfYFVKG---WHGYlENPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLT 241
Cdd:TIGR00911 197 CKLLALLLIIITGWV-QLGKGgveSLNP-KNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIII 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   242 GISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLP 321
Cdd:TIGR00911 275 SMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLP 354

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   322 ACFSCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRHNHIPVHPdAVRVPLFCIYLF 401
Cdd:TIGR00911 355 SLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVFF 433

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 71982608   402 LAITVALVIIPIFYEFQSTALAIAICLFGFVLYYVFIHKAIFPRWLVALNKKVTLWCCILF 462
Cdd:TIGR00911 434 LLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
6-440 2.63e-53

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 186.64  E-value: 2.63e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDsiGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYV--KWY 83
Cdd:COG0531  12 KLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG--PAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRAlgPLL 89

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  84 SIAFAFMWVSVLMTYPATIAIcaeTFGQYLIeglkqyyeiddALVPTC-QKLFAYSLLFLVTWMNFFELsKFAARFQILA 162
Cdd:COG0531  90 GFLAGWALLLSYVLAVAAVAV---AFGGYLS-----------SLFPAGgSVLIALVLILLLTLLNLRGV-KESAKVNNIL 154

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 163 TIAKLFSCMLIIGTGFYFYFVKGWHgylenPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTG 242
Cdd:COG0531 155 TVLKLLVLLLFIVVGLFAFDPANFT-----PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 243 ISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGD-FANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLP 321
Cdd:COG0531 230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 322 ACFSCVNTETESPRVAVLAQSVLA--LVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRHNHiPVHPDAVRVPLFCIY 399
Cdd:COG0531 310 KVFAKVHPRFGTPVNAILLTGVIAllLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRR-PDLPRPFRVPLPLIP 388

                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 71982608 400 LFLAITVALVIIPIFYEfqSTALAIAICLFGFVLYYVFIHK 440
Cdd:COG0531 389 ILGILLCLFLLYLLGPG--ALLIGLVLLAIGLLLYLLYRRR 427
frlA PRK11357
amino acid permease;
6-435 2.32e-33

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 131.90  E-value: 2.32e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSI 85
Cdd:PRK11357   9 KLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   86 AFAFMWVSVLMTYPATIAICAETFGQYLieglkQYYEIDDALVptcQKLFAYSLLFLVTWMNFFELSKfAARFQILATIA 165
Cdd:PRK11357  89 AFLSGWASFWANDAPSLSIMALAIVSNL-----GFLTPIDPLL---GKFIAAGLIIAFMLLHLRSVEG-GAAFQTLITIA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  166 KLFSCMLIIGTGfyFYFVKGwhGYLENPMQGSKYGTGN---LILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTG 242
Cdd:PRK11357 160 KIIPFTIVIGLG--IFWFKA--ENFAAPTTTAIGATGSfmaLLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGS 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  243 ISVVTAIYVAINVAYFVVLDVETVKQSDA-VAAIFSR-ETLGDFAN-VVPFLIGILLIGSLNSNLFSGSRYMYAAARQGH 319
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETpISDALTWiPALGSTAGiFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  320 LPACFSCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRhNHIPVHPdAVRVPLFCIY 399
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCR-KRDDYKP-LWRTPAFGLM 393

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 71982608  400 LFLAITVALVIIP---IFYEFQSTALAIAICLFGFVLYY 435
Cdd:PRK11357 394 TTLAIASSLILVAstfVWAPIPGLICAVIVIATGLPAYA 432
AA_permease_2 pfam13520
Amino acid permease;
8-432 6.68e-24

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 104.31  E-value: 6.68e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608     8 GFLGATSYVIGNIIGSGIFITPasilrNVDSIGLSLLIWVLCAVIA--ILGAICYIELGTSIREAGCDFAY---ICYVKW 82
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGWIAAIIfsLAVGLVYAELSSALPRSGGIYVYlenAFGKFV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    83 YSIAFAFMWVSVLMTYPATIAICAETFGqylieglkqyYEIDDALVPT--CQKLFAYSLLFLVTWMNFFeLSKFAARFQI 160
Cdd:pfam13520  77 AFLAGWSNWFAYVLGLASSASVAASYLL----------SALGPDLVPTtwLTYGIAIAILIIFAIINIR-GVRESAKIQN 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   161 LATIAKLFSCMLIIGTGFYFYFVKGWHGYLENPMQGSKYGTGNLIL-GFYGGLWAFSGWDVLNYSTGEikHPKRNVPFAL 239
Cdd:pfam13520 146 ILGILKLLLPLILIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFaGFLGVLWSFTGFESAANVSEE--VKKRNVPKAI 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   240 LTGISVVTAIYVAINVAYFVVLDVETVKQSD---AVAAIFSRETLGD-FANVVPFLIGILLIGSLNSNLFSGSRYMYAAA 315
Cdd:pfam13520 224 FIGVIIVGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALA 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   316 RQGHLPAC--FSCVNtETESPRVAVLAQSVLALVISYI-----GDLDTLITYVMFGFWAQRIFSLVALLIIR--HNHIPV 386
Cdd:pfam13520 304 RDGVLPFSrfFAKVN-KFGSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRkkRPDLGR 382

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 71982608   387 HPDAVRVPLFCIyLFLAITVALVIIPIFYEFQSTALAIAICLFGFV 432
Cdd:pfam13520 383 IPGRWPVAIFGI-LFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 6-462 3.26e-92

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 290.88  E-value: 3.26e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608     6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSI 85
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    86 AFAFMWVSVLMTYPATIAICAETFGQYLIEGLkqyyeIDDALVPT-CQKLFAYSLLFLVTWMNFFELsKFAARFQILATI 164
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPV-----FPDCEVPEwAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTA 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   165 AKLFSCMLIIGTGFYfYFVKG---WHGYlENPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLT 241
Cdd:TIGR00911 197 CKLLALLLIIITGWV-QLGKGgveSLNP-KNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIII 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   242 GISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLP 321
Cdd:TIGR00911 275 SMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLP 354

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   322 ACFSCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRHNHIPVHPdAVRVPLFCIYLF 401
Cdd:TIGR00911 355 SLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVFF 433

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 71982608   402 LAITVALVIIPIFYEFQSTALAIAICLFGFVLYYVFIHKAIFPRWLVALNKKVTLWCCILF 462
Cdd:TIGR00911 434 LLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
6-440 2.63e-53

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 186.64  E-value: 2.63e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDsiGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYV--KWY 83
Cdd:COG0531  12 KLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG--PAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRAlgPLL 89

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  84 SIAFAFMWVSVLMTYPATIAIcaeTFGQYLIeglkqyyeiddALVPTC-QKLFAYSLLFLVTWMNFFELsKFAARFQILA 162
Cdd:COG0531  90 GFLAGWALLLSYVLAVAAVAV---AFGGYLS-----------SLFPAGgSVLIALVLILLLTLLNLRGV-KESAKVNNIL 154

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 163 TIAKLFSCMLIIGTGFYFYFVKGWHgylenPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTG 242
Cdd:COG0531 155 TVLKLLVLLLFIVVGLFAFDPANFT-----PFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 243 ISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGD-FANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLP 321
Cdd:COG0531 230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608 322 ACFSCVNTETESPRVAVLAQSVLA--LVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRHNHiPVHPDAVRVPLFCIY 399
Cdd:COG0531 310 KVFAKVHPRFGTPVNAILLTGVIAllLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRR-PDLPRPFRVPLPLIP 388

                       410       420       430       440
                ....*....|....*....|....*....|....*....|.
gi 71982608 400 LFLAITVALVIIPIFYEfqSTALAIAICLFGFVLYYVFIHK 440
Cdd:COG0531 389 ILGILLCLFLLYLLGPG--ALLIGLVLLAIGLLLYLLYRRR 427
frlA PRK11357
amino acid permease;
6-435 2.32e-33

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 131.90  E-value: 2.32e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSI 85
Cdd:PRK11357   9 KLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   86 AFAFMWVSVLMTYPATIAICAETFGQYLieglkQYYEIDDALVptcQKLFAYSLLFLVTWMNFFELSKfAARFQILATIA 165
Cdd:PRK11357  89 AFLSGWASFWANDAPSLSIMALAIVSNL-----GFLTPIDPLL---GKFIAAGLIIAFMLLHLRSVEG-GAAFQTLITIA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  166 KLFSCMLIIGTGfyFYFVKGwhGYLENPMQGSKYGTGN---LILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTG 242
Cdd:PRK11357 160 KIIPFTIVIGLG--IFWFKA--ENFAAPTTTAIGATGSfmaLLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGS 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  243 ISVVTAIYVAINVAYFVVLDVETVKQSDA-VAAIFSR-ETLGDFAN-VVPFLIGILLIGSLNSNLFSGSRYMYAAARQGH 319
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETpISDALTWiPALGSTAGiFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  320 LPACFSCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIFSLVALLIIRhNHIPVHPdAVRVPLFCIY 399
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCR-KRDDYKP-LWRTPAFGLM 393

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 71982608  400 LFLAITVALVIIP---IFYEFQSTALAIAICLFGFVLYY 435
Cdd:PRK11357 394 TTLAIASSLILVAstfVWAPIPGLICAVIVIATGLPAYA 432
AA_permease_2 pfam13520
Amino acid permease;
8-432 6.68e-24

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 104.31  E-value: 6.68e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608     8 GFLGATSYVIGNIIGSGIFITPasilrNVDSIGLSLLIWVLCAVIA--ILGAICYIELGTSIREAGCDFAY---ICYVKW 82
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGWIAAIIfsLAVGLVYAELSSALPRSGGIYVYlenAFGKFV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    83 YSIAFAFMWVSVLMTYPATIAICAETFGqylieglkqyYEIDDALVPT--CQKLFAYSLLFLVTWMNFFeLSKFAARFQI 160
Cdd:pfam13520  77 AFLAGWSNWFAYVLGLASSASVAASYLL----------SALGPDLVPTtwLTYGIAIAILIIFAIINIR-GVRESAKIQN 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   161 LATIAKLFSCMLIIGTGFYFYFVKGWHGYLENPMQGSKYGTGNLIL-GFYGGLWAFSGWDVLNYSTGEikHPKRNVPFAL 239
Cdd:pfam13520 146 ILGILKLLLPLILIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFaGFLGVLWSFTGFESAANVSEE--VKKRNVPKAI 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   240 LTGISVVTAIYVAINVAYFVVLDVETVKQSD---AVAAIFSRETLGD-FANVVPFLIGILLIGSLNSNLFSGSRYMYAAA 315
Cdd:pfam13520 224 FIGVIIVGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALA 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   316 RQGHLPAC--FSCVNtETESPRVAVLAQSVLALVISYI-----GDLDTLITYVMFGFWAQRIFSLVALLIIR--HNHIPV 386
Cdd:pfam13520 304 RDGVLPFSrfFAKVN-KFGSPIRAIILTAILSLILLLLfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRkkRPDLGR 382

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 71982608   387 HPDAVRVPLFCIyLFLAITVALVIIPIFYEFQSTALAIAICLFGFV 432
Cdd:pfam13520 383 IPGRWPVAIFGI-LFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 17-381 1.62e-22

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 101.04  E-value: 1.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    17 IGNIIGSGIFITPASILRNvDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYIcYVKWYSI-AFAFMWvSVL 95
Cdd:TIGR00906  40 IGSTIGAGIYVLTGEVARN-DSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYS-YVTVGELwAFITGW-NLI 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    96 MTYPATIAICAETFGQYLIEGL--------KQYYEIDDALVPTCQKLFAYSLLFLVTWMNFFElSKFAARFQILATIAKL 167
Cdd:TIGR00906 117 LEYVIGTAAVARSWSAYFDELLnkqigqfrRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSFG-VKESAWVNKIFTAINI 195

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   168 FSCMLIIGTGFYFYFVKGWHGYLENPMQG-SKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTGISVV 246
Cdd:TIGR00906 196 LVLLFVIIAGFTKADVANWSITEEKGAGGfMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVC 275

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   247 TAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLPACFSC 326
Cdd:TIGR00906 276 FVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQ 355

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 71982608   327 VNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGfwAQRIFSLVA--LLIIRH 381
Cdd:TIGR00906 356 INSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIG--TLLAYSLVAacVLILRY 410
PRK10644 PRK10644
arginine/agmatine antiporter;
1-411 1.04e-15

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 79.45  E-value: 1.04e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    1 MDESHKMGFLGATSYVIGNIIGSGIFITPASIlrnVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYIcyV 80
Cdd:PRK10644   4 DADAHKVGLIPVTLMVAGNIMGSGVFLLPANL---ASTGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYA--R 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   81 KWYSIAFAFM-----WVSVLMTYPAtIAICAETFGQYLIEGLKqyyeidDALVPTCQKLFaysLLFLVTWMNFFElSKFA 155
Cdd:PRK10644  79 RCFGPFLGYQtnvlyWLACWIGNIA-MVVIGVGYLSYFFPILK------DPLVLTITCVV---VLWIFVLLNIVG-PKMI 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  156 ARFQILATIAKLFSCMLIIGTGFYFY----FVKGWhgyleNPMQGSKYGTGNLILGFygGLWAFSGWDVLNYSTGEIKHP 231
Cdd:PRK10644 148 TRVQAVATVLALIPIVGIAVFGWFWFrgetYMAAW-----NVSGLGTFGAIQSTLNV--TLWSFIGVESASVAAGVVKNP 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  232 KRNVPFALLTGISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFA-NVVPFLIGILLIGSLNSNLFSGSRY 310
Cdd:PRK10644 221 KRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAgAIVSFCAAAGCLGSLGGWTLLAGQT 300

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  311 MYAAARQGHLPACFSCVNTEtESPRVAVLAQSVLALV----------------ISYIGDLDTLITYvmfgfwaqrIFSLV 374
Cdd:PRK10644 301 AKAAADDGLFPPIFARVNKA-GTPVAGLLIVGVLMTIfqlssispnaskefglVSSVSVIFTLVPY---------LYTCA 370

                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 71982608  375 ALLIIRHNHIPVHpdavrVPLFCIYLFLAITVALVII 411
Cdd:PRK10644 371 ALLLLGHGHFGKA-----RPAYLAVTLIAFVYCIWAV 402
AA_permease pfam00324
Amino acid permease;
17-363 4.07e-10

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 61.95  E-value: 4.07e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    17 IGNIIGSGIFITPASILRNVdSIGLSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYIcyVKWYSIAFAFM-----W 91
Cdd:pfam00324   7 LGGVIGTGLFVGSGSVLGQA-GPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYA--SRFLGPSLGFAtgwnyW 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    92 VSVLMTYPATIaICAETFGQYLIeglkqyyeiddaLVPTCQKLFAYSLLF--LVTWMNFFELsKFAARFQILATIAKLFS 169
Cdd:pfam00324  84 LSWITVLALEL-TAASILIQFWE------------LVPDIPYLWVWGAVFlvLLTIINLVGV-KWYGEAEFWFALIKIIA 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   170 ------CMLIIGTGFYFYFVKGWHGYLENPMQG--SKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLT 241
Cdd:pfam00324 150 iigfiiVGIILLSGGNPNDGAIFRYLGDNGGKNnfPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQ 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   242 GISVVTAIYVAINVAYFVVLDV-------ETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAA 314
Cdd:pfam00324 230 VIWRITIFYILSLLAIGLLVPWndpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSL 309

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 71982608   315 ARQGHLPACFSCVNTETEsPRVAVLAQSVLALVISYIGDLDTLITYVMF 363
Cdd:pfam00324 310 ARDGLAPKFLKKVDKRGV-PLRAILVSMVISLLALLLASLNPAIVFNFL 357
cadB PRK10435
cadaverine/lysine antiporter;
1-324 1.54e-09

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 60.15  E-value: 1.54e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    1 MDESHKMGFLGATSYVIGNIIGSGIFITPASiLRNVDSIglSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYV 80
Cdd:PRK10435   1 MSSAKKIGLFACTGVVAGNMMGSGIALLPAN-LASIGSI--AIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   81 kwySIAFAFMwVSVLMtYPAT------IAICAETFgqyliegLKQYYEIDDALVPTCQKLFAYSLLFlvTWMNFFELSkF 154
Cdd:PRK10435  78 ---SPAFGFQ-TGVLY-YHANwignlaIGITAVSY-------LSTFFPVLNDPIPAGIACIAIVWVF--TFVNMLGGT-W 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  155 AARfqiLATIAKLFSCMLIIGTGfyfyfVKGWHG-----YLENPMQGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIK 229
Cdd:PRK10435 143 VSR---LTTIGLVLVLIPVVGTA-----IVGWHWfdaatYAANWNTSDTTDGHAIIKSILLCLWAFVGVESAAVSTGMVK 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  230 HPKRNVPFALLTGISVVTAIYVAINVAYFVVLDVETVKQSDAVAAIFSRETLGDFAN-VVPFLIGILLIGSLNSNLFSGS 308
Cdd:PRK10435 215 NPKRTVPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAApLVSAFTAFACLTSLGSWMMLVG 294

                        330
                 ....*....|....*.
gi 71982608  309 RYMYAAARQGHLPACF 324
Cdd:PRK10435 295 QAGVRAANDGNFPKVY 310
potE PRK10655
putrescine transporter; Provisional
 1-346 3.69e-09

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 58.89  E-value: 3.69e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    1 MDESHKMGFLGATSYVIGNIIGSGIFITPASiLRNVDSIglSLLIWVLCAVIAILGAICYIELGTSIREAGCDFAYICYV 80
Cdd:PRK10655   2 SAKSNKMGVVQLTILTAVNMMGSGIIMLPTK-LAQVGTI--SILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   81 kwYSIAFAFM-----WVSVLMTYPAtIAICAETFGQYLieglkqyYEIDDALVPTCqkLFAYSLLFLVTWMNFFElSKFA 155
Cdd:PRK10655  79 --FGKSGNFManytyGVSLLIANVA-IAISAVGYGTEL-------FGATLSPVQIC--LATIGVLWLCTVANFGG-ARIT 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  156 AR---FQILATIAKLFSCMLIigtGFYFY----FVKGWhgyleNPMQgskygtgnliLGFYGG--------LWAFSGWDV 220
Cdd:PRK10655 146 GQissVTVWGVIIPVVGLSII---GWFWFspslYVAAW-----NPHH----------LPFFSAvgssiamtLWAFLGLES 207

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  221 LNYSTGEIKHPKRNVPFALLTGISVVTAIY-VAINVAYFVVLDVETVKQSDAVAAIFSR---ETLGdfaNVVPFLIGILL 296
Cdd:PRK10655 208 ACANSDAVENPERNVPIAVLGGTLGAAVIYiVSTNVIAGIVPNMELANSTAPFGLAFAQmfnPTVG---KIVMALMVMSC 284

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 71982608  297 IGSLNSNLFSGSRYMYAAARQGHLPACFSCVnTETESPRVAVL----AQSVLAL 346
Cdd:PRK10655 285 CGSLLGWQFTIAQVFKSSADEGYFPKIFSRV-TKVDAPVQGMLiivvIQSLLSL 337
PRK11021 PRK11021
putative transporter; Provisional
 213-377 3.28e-08

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 55.69  E-value: 3.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  213 WAFSGWDVLNYSTGEIKHPKRNVPFALLTGISVVTAIYVAINVAYFVVlDVETVKQSDAVA--AIFSReTLGDFANVVPF 290
Cdd:PRK11021 188 WCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHF-PAYGDKQAAAASlpGIFVQ-LFGGYALWVIC 265

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  291 LIGIL-LIGSLNSNLFSGSRYMYAAARQGHLPACFSCVNTETESPR--VAVLAQSVLALVISYIG--DLDTLITyvmfgf 365
Cdd:PRK11021 266 VIGYLaCFASVNIYTQSFARLVWSQAREGRPPSYLARLSARGVPVNalNAVLGCCAVSILLIYALglNLEALIA------ 339

                        170
                 ....*....|..
gi 71982608  366 WAQRIFSLVALL 377
Cdd:PRK11021 340 YANGIFVLIYLL 351
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 17-351 3.23e-07

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 52.67  E-value: 3.23e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    17 IGNIIGSGIFITPASILRNVDSIGLsLLIWVLCAVIAILGAICYIELGTSIREAGCDFAyiCYVKWY---SIAFAFMWVS 93
Cdd:TIGR00913  14 LGGTIGTGLLVGSGTALATGGPAGL-LIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFA--TYASRFvdpAFGFAVGWNY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608    94 VLM---TYPATIAICAETFgqylieglkQYYeiDDALVPTcqklfAYSLLFLV--TWMNFFELSKFA------ARFQILA 162
Cdd:TIGR00913  91 WLQwliVLPLELVTASMTI---------QYW--TDKVNPA-----VWIAIFYVfiVIINLFGVKGYGeaefwfSSIKILA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   163 TIAKLFSCMLII----GTGFYFYFvKGWHgyleNPMQGSKYGTGNLILGFYGGL----WAFSGWDVLNYSTGEIKHPKRN 234
Cdd:TIGR00913 155 IIGFIILSIILNcgggPNHGYIGF-RYWH----DPGAFAGGTIGGRFKGVCSVFvtaaFSFGGTELVALTAGEAANPRKS 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   235 VP------FALLTGISVVTAIYVAINVAY-----FVVLDVETVKQSDAVAAI--FSRETLGDFANVVpflIGILLIGSLN 301
Cdd:TIGR00913 230 IPraakrtFWRILVFYILTLFLIGFLVPYndprlLSSSSSSDSAASPFVIAIqnHGIKVLPHIFNAV---ILISVLSAAN 306

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 71982608   302 SNLFSGSRYMYAAARQGHLPACFSCVNTETEsPRVAVLAQSVLALvISYI 351
Cdd:TIGR00913 307 SSLYASSRTLYALAHQGLAPKIFAYVDRRGV-PYVAVIVSSLFGL-LAFL 354
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 205-352 1.35e-05

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 47.82  E-value: 1.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608   205 ILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALL--TGISVVTAIYVAInVAYFVVLDVETVKQSDA---VAAIFSrE 279
Cdd:TIGR00907 220 LLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIgaVAIGIVTGFCFNI-VLFFSMGDIDSLISSTTgqpIAQIFY-N 297

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 71982608   280 TLGDFANVVPFLIGILLI--GSLNSNLFSGSRYMYAAARQGHLPAC--FSCVNTETESPRVAVLAQSVLALVISYIG 352
Cdd:TIGR00907 298 ALGNKAGAIFLLCLILVTsfFCAITCMTANSRMIYAFSRDGGLPFSplWSRVNPRTQVPLNAVWLSAVWIILIGLLG 374
PRK11387 PRK11387
S-methylmethionine permease;
213-418 7.64e-05

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 45.23  E-value: 7.64e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  213 WAFSGWDVLNYSTGEIKHPKRNVPFALLTGISVVTAIYVA--INVAYFVVLDVETVKQSDAVAAiFSRETLGDFANVVPF 290
Cdd:PRK11387 217 FAFSGTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGtvLVLAALIPMQQAGVEKSPFVLV-FEKVGIPYAADIFNF 295

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71982608  291 LIGILLIGSLNSNLFSGSRYMYAAARQGHLPACFScvntetespRVAVLAQSVLALVISYIGDLDTLITYVmfgfwaqri 370
Cdd:PRK11387 296 VILTAILSAANSGLYASGRMLWSLSNEGTLPACFA---------RLTKRGIPLTALSVSMLGGLLALFSSV--------- 357

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 71982608  371 fslvalliirhnhipVHPDAVRVPLFCIYLFLAITVALVIIPIFYEFQ 418
Cdd:PRK11387 358 ---------------VAPDTVFVALSAISGFAVVAVWLSICASHFMFR 390
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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