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Conserved domains on  [gi|17506909|ref|NP_491592|]
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Dauer Up-Regulated [Caenorhabditis elegans]

Protein Classification

DUF236 domain-containing protein( domain architecture ID 10503545)

DUF236 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 138-169 2.03e-11

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


:

Pssm-ID: 460789  Cd Length: 31  Bit Score: 57.09  E-value: 2.03e-11
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909   138 PKAPdGKPGMAGTHDPNYQTLAGLNDNVFDKK 169
Cdd:pfam03057   1 PKAP-AKGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 97-128 1.53e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


:

Pssm-ID: 460789  Cd Length: 31  Bit Score: 52.08  E-value: 1.53e-09
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909    97 PKPPKNRAaIADTHDPNYQTLAGLNDNVFEQK 128
Cdd:pfam03057   1 PKAPAKGG-MAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 184-209 2.16e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


:

Pssm-ID: 460789  Cd Length: 31  Bit Score: 51.70  E-value: 2.16e-09
                          10        20
                  ....*....|....*....|....*.
gi 17506909   184 KPGMAATHDPNYQTLAGLNNNVFDQK 209
Cdd:pfam03057   6 KGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 233-257 1.41e-08

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


:

Pssm-ID: 460789  Cd Length: 31  Bit Score: 49.39  E-value: 1.41e-08
                          10        20
                  ....*....|....*....|....*
gi 17506909   233 GAKAATHDPNYQTLAGLNQDVFGAD 257
Cdd:pfam03057   7 GGMAGTHDPNYQTLAGLNNDIFGKK 31
 
Name Accession Description Interval E-value
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 138-169 2.03e-11

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 57.09  E-value: 2.03e-11
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909   138 PKAPdGKPGMAGTHDPNYQTLAGLNDNVFDKK 169
Cdd:pfam03057   1 PKAP-AKGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 97-128 1.53e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 52.08  E-value: 1.53e-09
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909    97 PKPPKNRAaIADTHDPNYQTLAGLNDNVFEQK 128
Cdd:pfam03057   1 PKAPAKGG-MAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 184-209 2.16e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 51.70  E-value: 2.16e-09
                          10        20
                  ....*....|....*....|....*.
gi 17506909   184 KPGMAATHDPNYQTLAGLNNNVFDQK 209
Cdd:pfam03057   6 KGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 233-257 1.41e-08

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 49.39  E-value: 1.41e-08
                          10        20
                  ....*....|....*....|....*
gi 17506909   233 GAKAATHDPNYQTLAGLNQDVFGAD 257
Cdd:pfam03057   7 GGMAGTHDPNYQTLAGLNNDIFGKK 31
 
Name Accession Description Interval E-value
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 138-169 2.03e-11

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 57.09  E-value: 2.03e-11
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909   138 PKAPdGKPGMAGTHDPNYQTLAGLNDNVFDKK 169
Cdd:pfam03057   1 PKAP-AKGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 97-128 1.53e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 52.08  E-value: 1.53e-09
                          10        20        30
                  ....*....|....*....|....*....|..
gi 17506909    97 PKPPKNRAaIADTHDPNYQTLAGLNDNVFEQK 128
Cdd:pfam03057   1 PKAPAKGG-MAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 184-209 2.16e-09

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 51.70  E-value: 2.16e-09
                          10        20
                  ....*....|....*....|....*.
gi 17506909   184 KPGMAATHDPNYQTLAGLNNNVFDQK 209
Cdd:pfam03057   6 KGGMAGTHDPNYQTLAGLNNDIFGKK 31
DUF236 pfam03057
DUF236 repeat; This family represents a short repeat region found a number of C. elegans ...
 233-257 1.41e-08

DUF236 repeat; This family represents a short repeat region found a number of C. elegans proteins of unknown function.


Pssm-ID: 460789  Cd Length: 31  Bit Score: 49.39  E-value: 1.41e-08
                          10        20
                  ....*....|....*....|....*
gi 17506909   233 GAKAATHDPNYQTLAGLNQDVFGAD 257
Cdd:pfam03057   7 GGMAGTHDPNYQTLAGLNNDIFGKK 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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