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Conserved domains on  [gi|193203062|ref|NP_493075|]
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SPK domain-containing protein [Caenorhabditis elegans]

Protein Classification

SPK domain-containing protein( domain architecture ID 10651859)

SPK domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
16-126 1.09e-39

domain in SET and PHD domain containing proteins and protein kinases;


:

Pssm-ID: 214732  Cd Length: 114  Bit Score: 135.00  E-value: 1.09e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203062    16 DSELLSFLIHETKDATEPIMAK-SVFIKCKKLET-IEKTWQCYLSRFTRKLAPLMEDFNTHSVDSRARTMFALAGRVEPS 93
Cdd:smart00583   2 LTRFMDFLVEKTKDAIEPLVVPlKVFEEFSKLEGnSLLSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVEDD 81
                           90       100       110
                   ....*....|....*....|....*....|...
gi 193203062    94 FFELLQIHANVQLDEMSRICKYKSKKGNLQFEG 126
Cdd:smart00583  82 FLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
 
Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
16-126 1.09e-39

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 135.00  E-value: 1.09e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203062    16 DSELLSFLIHETKDATEPIMAK-SVFIKCKKLET-IEKTWQCYLSRFTRKLAPLMEDFNTHSVDSRARTMFALAGRVEPS 93
Cdd:smart00583   2 LTRFMDFLVEKTKDAIEPLVVPlKVFEEFSKLEGnSLLSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVEDD 81
                           90       100       110
                   ....*....|....*....|....*....|...
gi 193203062    94 FFELLQIHANVQLDEMSRICKYKSKKGNLQFEG 126
Cdd:smart00583  82 FLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
19-122 3.27e-26

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 99.52  E-value: 3.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203062   19 LLSFLIHETKDATEPIMAKSVFIKCKKLETIEKTWQCYLSRFTRKLAPlMEDFNTHSVDSRARTMFALAGRVEPSFFELL 98
Cdd:pfam04435   1 LLKFLAEKTKNATEPLSLTQLCREFKEKTGSKLSVSTLRKRFRRILAK-IHKLEEYDLETKVRMLFALSAPVDEDFLKEL 79
                          90       100
                  ....*....|....*....|....
gi 193203062   99 QIHANVQLDEMSRICKYKSKKGNL 122
Cdd:pfam04435  80 RKDATVELDEKNRIIKYKSNDGSL 103
 
Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
16-126 1.09e-39

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 135.00  E-value: 1.09e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203062    16 DSELLSFLIHETKDATEPIMAK-SVFIKCKKLET-IEKTWQCYLSRFTRKLAPLMEDFNTHSVDSRARTMFALAGRVEPS 93
Cdd:smart00583   2 LTRFMDFLVEKTKDAIEPLVVPlKVFEEFSKLEGnSLLSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVEDD 81
                           90       100       110
                   ....*....|....*....|....*....|...
gi 193203062    94 FFELLQIHANVQLDEMSRICKYKSKKGNLQFEG 126
Cdd:smart00583  82 FLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
19-122 3.27e-26

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 99.52  E-value: 3.27e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 193203062   19 LLSFLIHETKDATEPIMAKSVFIKCKKLETIEKTWQCYLSRFTRKLAPlMEDFNTHSVDSRARTMFALAGRVEPSFFELL 98
Cdd:pfam04435   1 LLKFLAEKTKNATEPLSLTQLCREFKEKTGSKLSVSTLRKRFRRILAK-IHKLEEYDLETKVRMLFALSAPVDEDFLKEL 79
                          90       100
                  ....*....|....*....|....
gi 193203062   99 QIHANVQLDEMSRICKYKSKKGNL 122
Cdd:pfam04435  80 RKDATVELDEKNRIIKYKSNDGSL 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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