F-box domain-containing protein [Caenorhabditis elegans]
Protein Classification
F-box protein( domain architecture ID 10459153)
F-box protein is the substrate-recognition component of a SCF(Skp1-cullin-F-box) E3 ubiquitin ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| FBA_2 | pfam07735 | F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that ... |
228-273 | 1.68e-11 | ||
F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that they are effectors linked with ubiquitination. : Pssm-ID: 429626 Cd Length: 67 Bit Score: 59.12 E-value: 1.68e-11
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| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
8-50 | 5.29e-04 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. : Pssm-ID: 425796 Cd Length: 43 Bit Score: 37.13 E-value: 5.29e-04
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| Name | Accession | Description | Interval | E-value | ||
| FBA_2 | pfam07735 | F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that ... |
228-273 | 1.68e-11 | ||
F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that they are effectors linked with ubiquitination. Pssm-ID: 429626 Cd Length: 67 Bit Score: 59.12 E-value: 1.68e-11
|
||||||
| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
8-50 | 5.29e-04 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 37.13 E-value: 5.29e-04
|
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| Name | Accession | Description | Interval | E-value | ||
| FBA_2 | pfam07735 | F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that ... |
228-273 | 1.68e-11 | ||
F-box associated; Most of these proteins contain pfam00646 at the N terminus, suggesting that they are effectors linked with ubiquitination. Pssm-ID: 429626 Cd Length: 67 Bit Score: 59.12 E-value: 1.68e-11
|
||||||
| F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
8-50 | 5.29e-04 | ||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 37.13 E-value: 5.29e-04
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| Blast search parameters | ||||
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