F-box domain-containing protein [Caenorhabditis elegans]
F-box protein( domain architecture ID 17778750)
F-box protein is the substrate-recognition component of a SCF(Skp1-cullin-F-box) E3 ubiquitin ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins; similar to Caenorhabditis elegans F-box domain-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | |||
FTH | pfam01827 | FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is ... |
128-272 | 1.24e-49 | |||
FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is found in many proteins from C. elegans. The domain is found associated with the F-box pfam00646. This domain is named FTH after FOG-2 homology domain. : Pssm-ID: 396410 Cd Length: 141 Bit Score: 161.20 E-value: 1.24e-49
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F-box_CeFBXA-like | cd22150 | F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and ... |
4-49 | 5.97e-10 | |||
F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins; The family includes a group of uncharacterized Caenorhabditis elegans F-box domain-containing proteins. They may be components of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. : Pssm-ID: 438921 Cd Length: 46 Bit Score: 53.64 E-value: 5.97e-10
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Name | Accession | Description | Interval | E-value | |||
FTH | pfam01827 | FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is ... |
128-272 | 1.24e-49 | |||
FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is found in many proteins from C. elegans. The domain is found associated with the F-box pfam00646. This domain is named FTH after FOG-2 homology domain. Pssm-ID: 396410 Cd Length: 141 Bit Score: 161.20 E-value: 1.24e-49
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F-box_CeFBXA-like | cd22150 | F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and ... |
4-49 | 5.97e-10 | |||
F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins; The family includes a group of uncharacterized Caenorhabditis elegans F-box domain-containing proteins. They may be components of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 438921 Cd Length: 46 Bit Score: 53.64 E-value: 5.97e-10
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FBOX | smart00256 | A Receptor for Ubiquitination Targets; |
7-46 | 2.02e-08 | |||
A Receptor for Ubiquitination Targets; Pssm-ID: 197608 Cd Length: 41 Bit Score: 49.36 E-value: 2.02e-08
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F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
4-46 | 4.25e-06 | |||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 42.91 E-value: 4.25e-06
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Name | Accession | Description | Interval | E-value | |||
FTH | pfam01827 | FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is ... |
128-272 | 1.24e-49 | |||
FTH domain; This presumed domain is likely to be a protein-protein interaction module. It is found in many proteins from C. elegans. The domain is found associated with the F-box pfam00646. This domain is named FTH after FOG-2 homology domain. Pssm-ID: 396410 Cd Length: 141 Bit Score: 161.20 E-value: 1.24e-49
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F-box_CeFBXA-like | cd22150 | F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and ... |
4-49 | 5.97e-10 | |||
F-box domain found in Caenorhabditis elegans F-box domain-containing proteins (CeFBXA) and similar proteins; The family includes a group of uncharacterized Caenorhabditis elegans F-box domain-containing proteins. They may be components of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 438921 Cd Length: 46 Bit Score: 53.64 E-value: 5.97e-10
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FBOX | smart00256 | A Receptor for Ubiquitination Targets; |
7-46 | 2.02e-08 | |||
A Receptor for Ubiquitination Targets; Pssm-ID: 197608 Cd Length: 41 Bit Score: 49.36 E-value: 2.02e-08
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F-box | pfam00646 | F-box domain; This domain is approximately 50 amino acids long, and is usually found in the ... |
4-46 | 4.25e-06 | |||
F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-terminal half of a variety of proteins. Two motifs that are commonly found associated with the F-box domain are the leucine rich repeats (LRRs; pfam00560 and pfam07723) and the WD repeat (pfam00400). The F-box domain has a role in mediating protein-protein interactions in a variety of contexts, such as polyubiquitination, transcription elongation, centromere binding and translational repression. Pssm-ID: 425796 Cd Length: 43 Bit Score: 42.91 E-value: 4.25e-06
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Blast search parameters | ||||
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