NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|17554452|ref|NP_498171|]
View 

Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

Protein Classification

chitin binding peritrophin-A domain-containing protein; glycoside hydrolase family 18 protein( domain architecture ID 10482967)

chitin binding peritrophin-A domain-containing protein similar to Blomia tropicalis major allergen Blo t 12 and Caenorhabditis elegans chondroitin proteoglycan 1| glycoside hydrolase family 18 protein similar to chitinase, which catalyzes the random endo-hydrolysis of the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ChtBD2 smart00494
Chitin-binding domain type 2;
240-283 1.06e-07

Chitin-binding domain type 2;


:

Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 48.21  E-value: 1.06e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 17554452    240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDY 283
Cdd:smart00494   5 GRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDW 48
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 310-361 2.10e-07

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


:

Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 47.41  E-value: 2.10e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 17554452   310 CTNMDNGLYAL--DCTpRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Cdd:pfam01607   1 CAGKEDGYYADpgDCS-KYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 185-229 2.11e-06

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


:

Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 44.71  E-value: 2.11e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 17554452   185 ISKSECSNvFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Cdd:pfam01607  10 ADPGDCSK-YYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
ChtBD2 smart00494
Chitin-binding domain type 2;
117-165 8.02e-06

Chitin-binding domain type 2;


:

Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 42.82  E-value: 8.02e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 17554452    117 NVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWK 165
Cdd:smart00494   1 NECPGRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 25-74 1.06e-05

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


:

Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 42.40  E-value: 1.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 17554452    25 CTNVGDGMYPL-GACePRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNV 74
Cdd:pfam01607   1 CAGKEDGYYADpGDC-SKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNV 50
 
Name Accession Description Interval E-value
ChtBD2 smart00494
Chitin-binding domain type 2;
240-283 1.06e-07

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 48.21  E-value: 1.06e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 17554452    240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDY 283
Cdd:smart00494   5 GRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDW 48
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 310-361 2.10e-07

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 47.41  E-value: 2.10e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 17554452   310 CTNMDNGLYAL--DCTpRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Cdd:pfam01607   1 CAGKEDGYYADpgDCS-KYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 240-290 3.14e-07

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 47.02  E-value: 3.14e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 17554452   240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Cdd:pfam01607   3 GKEDGYYADPGDCSKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 185-229 2.11e-06

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 44.71  E-value: 2.11e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 17554452   185 ISKSECSNvFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Cdd:pfam01607  10 ADPGDCSK-YYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
ChtBD2 smart00494
Chitin-binding domain type 2;
309-355 5.15e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 43.20  E-value: 5.15e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 17554452    309 PCTNMDNGLYAL--DCTpRVLSCQNGRENIFECPPSLVFNENSLICDYP 355
Cdd:smart00494   2 ECPGRGDGLYPHptDCS-KYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
ChtBD2 smart00494
Chitin-binding domain type 2;
181-223 6.52e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 43.20  E-value: 6.52e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 17554452    181 SDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWP 223
Cdd:smart00494   7 GDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
ChtBD2 smart00494
Chitin-binding domain type 2;
117-165 8.02e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 42.82  E-value: 8.02e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 17554452    117 NVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWK 165
Cdd:smart00494   1 NECPGRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 25-74 1.06e-05

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 42.40  E-value: 1.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 17554452    25 CTNVGDGMYPL-GACePRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNV 74
Cdd:pfam01607   1 CAGKEDGYYADpGDC-SKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNV 50
ChtBD2 smart00494
Chitin-binding domain type 2;
24-71 4.94e-05

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 40.50  E-value: 4.94e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 17554452     24 DCTNVGDGMYPLGACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDWR 71
Cdd:smart00494   2 ECPGRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 119-171 6.06e-05

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 40.47  E-value: 6.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 17554452   119 CESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Cdd:pfam01607   1 CAGKEDGYYADPGDCSKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
 
Name Accession Description Interval E-value
ChtBD2 smart00494
Chitin-binding domain type 2;
240-283 1.06e-07

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 48.21  E-value: 1.06e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 17554452    240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDY 283
Cdd:smart00494   5 GRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDW 48
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 310-361 2.10e-07

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 47.41  E-value: 2.10e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 17554452   310 CTNMDNGLYAL--DCTpRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
Cdd:pfam01607   1 CAGKEDGYYADpgDCS-KYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 240-290 3.14e-07

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 47.02  E-value: 3.14e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 17554452   240 GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Cdd:pfam01607   3 GKEDGYYADPGDCSKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 185-229 2.11e-06

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 44.71  E-value: 2.11e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 17554452   185 ISKSECSNvFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Cdd:pfam01607  10 ADPGDCSK-YYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
ChtBD2 smart00494
Chitin-binding domain type 2;
309-355 5.15e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 43.20  E-value: 5.15e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 17554452    309 PCTNMDNGLYAL--DCTpRVLSCQNGRENIFECPPSLVFNENSLICDYP 355
Cdd:smart00494   2 ECPGRGDGLYPHptDCS-KYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
ChtBD2 smart00494
Chitin-binding domain type 2;
181-223 6.52e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 43.20  E-value: 6.52e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 17554452    181 SDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWP 223
Cdd:smart00494   7 GDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
ChtBD2 smart00494
Chitin-binding domain type 2;
117-165 8.02e-06

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 42.82  E-value: 8.02e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 17554452    117 NVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWK 165
Cdd:smart00494   1 NECPGRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 25-74 1.06e-05

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 42.40  E-value: 1.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 17554452    25 CTNVGDGMYPL-GACePRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNV 74
Cdd:pfam01607   1 CAGKEDGYYADpGDC-SKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNV 50
ChtBD2 smart00494
Chitin-binding domain type 2;
24-71 4.94e-05

Chitin-binding domain type 2;


Pssm-ID: 214696 [Multi-domain]  Cd Length: 49  Bit Score: 40.50  E-value: 4.94e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 17554452     24 DCTNVGDGMYPLGACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDWR 71
Cdd:smart00494   2 ECPGRGDGLYPHPTDCSKYYQCSNGRPIVGSCPAGLVFNPATQTCDWP 49
CBM_14 pfam01607
Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is ...
 119-171 6.06e-05

Chitin binding Peritrophin-A domain; This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains.


Pssm-ID: 426342 [Multi-domain]  Cd Length: 53  Bit Score: 40.47  E-value: 6.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 17554452   119 CESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Cdd:pfam01607   1 CAGKEDGYYADPGDCSKYYVCSNGEAVEFTCPNGLVFDPTLGICDYPDNVVDC 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH