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Conserved domains on  [gi|71984252|ref|NP_498194|]
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Nematode Specific Peptide family, group B [Caenorhabditis elegans]

Protein Classification

DUF1459 domain-containing protein( domain architecture ID 10538148)

DUF1459 domain-containing protein similar to Caenorhabditis elegans Nematode Specific Peptide family, group B

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1459 pfam07312
Protein of unknown function (DUF1459); This family consists of several hypothetical ...
 1-81 3.62e-27

Protein of unknown function (DUF1459); This family consists of several hypothetical Caenorhabditis elegans proteins of around 85 residues in length. The function of this family is unknown.


:

Pssm-ID: 462143  Cd Length: 81  Bit Score: 94.24  E-value: 3.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984252    1 MFAKCFVAVLLCAMIVG-SHQQYVVPSYSAAYVPSAYAYPSVYSPYVAAAAYPSVWAWGSNKNKDDaAPRAFARPSALLN 79
Cdd:pfam07312  1 MFQKCLIVLALCSLFIGsSSQQVVVPAYSAAYYPSAYAYPSVYSPYLTAAAYPSVWAWGSNKNKQS-APSAFAPTQKLTN 79


                 ..
gi 71984252   80 NQ 81
Cdd:pfam07312 80 NQ 81
 
Name Accession Description Interval E-value
DUF1459 pfam07312
Protein of unknown function (DUF1459); This family consists of several hypothetical ...
 1-81 3.62e-27

Protein of unknown function (DUF1459); This family consists of several hypothetical Caenorhabditis elegans proteins of around 85 residues in length. The function of this family is unknown.


Pssm-ID: 462143  Cd Length: 81  Bit Score: 94.24  E-value: 3.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984252    1 MFAKCFVAVLLCAMIVG-SHQQYVVPSYSAAYVPSAYAYPSVYSPYVAAAAYPSVWAWGSNKNKDDaAPRAFARPSALLN 79
Cdd:pfam07312  1 MFQKCLIVLALCSLFIGsSSQQVVVPAYSAAYYPSAYAYPSVYSPYLTAAAYPSVWAWGSNKNKQS-APSAFAPTQKLTN 79


                 ..
gi 71984252   80 NQ 81
Cdd:pfam07312 80 NQ 81
 
Name Accession Description Interval E-value
DUF1459 pfam07312
Protein of unknown function (DUF1459); This family consists of several hypothetical ...
 1-81 3.62e-27

Protein of unknown function (DUF1459); This family consists of several hypothetical Caenorhabditis elegans proteins of around 85 residues in length. The function of this family is unknown.


Pssm-ID: 462143  Cd Length: 81  Bit Score: 94.24  E-value: 3.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984252    1 MFAKCFVAVLLCAMIVG-SHQQYVVPSYSAAYVPSAYAYPSVYSPYVAAAAYPSVWAWGSNKNKDDaAPRAFARPSALLN 79
Cdd:pfam07312  1 MFQKCLIVLALCSLFIGsSSQQVVVPAYSAAYYPSAYAYPSVYSPYLTAAAYPSVWAWGSNKNKQS-APSAFAPTQKLTN 79


                 ..
gi 71984252   80 NQ 81
Cdd:pfam07312 80 NQ 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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