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Conserved domains on  [gi|17555842|ref|NP_499515|]
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DUF3105 domain-containing protein [Caenorhabditis elegans]

Protein Classification

DUF3105 domain-containing protein( domain architecture ID 10568244)

DUF3105 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3105 pfam11303
Protein of unknown function (DUF3105); Some members in this family of proteins are annotated ...
 84-209 9.08e-55

Protein of unknown function (DUF3105); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


:

Pssm-ID: 463256  Cd Length: 130  Bit Score: 171.67  E-value: 9.08e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17555842    84 HRCMDETIDYEDRIPIRGDHRPNWARFGEYLY---VPVQRWLHNLEHGSIVLLYHPCVDLDELNKLRQLVTSCIYRHVIT 160
Cdd:pfam11303   1 HVCMGESVAYPQTPPVGGPHRPVWANCGGYVYdkpVPNERAVHSLEHGAVWITYDPCLPPDQVEKLKALVKGCPYRVLLS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 17555842   161 PYIKLTAerPLALVGWGSRLEMNSVDEKKVVEFMKKY--GNRAPEE-ITRDG 209
Cdd:pfam11303  81 PYPGLDS--PIALTAWGRQLKLDSADDERVKQFIRKYaqGPQGPEPgAACSG 130
 
Name Accession Description Interval E-value
DUF3105 pfam11303
Protein of unknown function (DUF3105); Some members in this family of proteins are annotated ...
 84-209 9.08e-55

Protein of unknown function (DUF3105); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 463256  Cd Length: 130  Bit Score: 171.67  E-value: 9.08e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17555842    84 HRCMDETIDYEDRIPIRGDHRPNWARFGEYLY---VPVQRWLHNLEHGSIVLLYHPCVDLDELNKLRQLVTSCIYRHVIT 160
Cdd:pfam11303   1 HVCMGESVAYPQTPPVGGPHRPVWANCGGYVYdkpVPNERAVHSLEHGAVWITYDPCLPPDQVEKLKALVKGCPYRVLLS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 17555842   161 PYIKLTAerPLALVGWGSRLEMNSVDEKKVVEFMKKY--GNRAPEE-ITRDG 209
Cdd:pfam11303  81 PYPGLDS--PIALTAWGRQLKLDSADDERVKQFIRKYaqGPQGPEPgAACSG 130
 
Name Accession Description Interval E-value
DUF3105 pfam11303
Protein of unknown function (DUF3105); Some members in this family of proteins are annotated ...
 84-209 9.08e-55

Protein of unknown function (DUF3105); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 463256  Cd Length: 130  Bit Score: 171.67  E-value: 9.08e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17555842    84 HRCMDETIDYEDRIPIRGDHRPNWARFGEYLY---VPVQRWLHNLEHGSIVLLYHPCVDLDELNKLRQLVTSCIYRHVIT 160
Cdd:pfam11303   1 HVCMGESVAYPQTPPVGGPHRPVWANCGGYVYdkpVPNERAVHSLEHGAVWITYDPCLPPDQVEKLKALVKGCPYRVLLS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 17555842   161 PYIKLTAerPLALVGWGSRLEMNSVDEKKVVEFMKKY--GNRAPEE-ITRDG 209
Cdd:pfam11303  81 PYPGLDS--PIALTAWGRQLKLDSADDERVKQFIRKYaqGPQGPEPgAACSG 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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