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Conserved domains on  [gi|17555852|ref|NP_499520|]
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Protein SUP-1 [Caenorhabditis elegans]

Protein Classification

DUF2650 domain-containing protein( domain architecture ID 10566810)

DUF2650 domain-containing protein similar to Caenorhabditis elegans protein SUP-1, which may be involved in trafficking or stabilization of the vesicular acetylcholine transporter unc-17

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 49-83 4.17e-13

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


:

Pssm-ID: 463190  Cd Length: 35  Bit Score: 58.07  E-value: 4.17e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 17555852    49 CGTSSIFHYWKCCGELNKECCFNLQTWVWVTLALF 83
Cdd:pfam10853   1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 49-83 4.17e-13

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


Pssm-ID: 463190  Cd Length: 35  Bit Score: 58.07  E-value: 4.17e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 17555852    49 CGTSSIFHYWKCCGELNKECCFNLQTWVWVTLALF 83
Cdd:pfam10853   1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Name Accession Description Interval E-value
DUF2650 pfam10853
Protein of unknown function (DUF2650); This family of proteins with unknown function appear to ...
 49-83 4.17e-13

Protein of unknown function (DUF2650); This family of proteins with unknown function appear to be restricted to Caenorhabditis elegans.


Pssm-ID: 463190  Cd Length: 35  Bit Score: 58.07  E-value: 4.17e-13
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 17555852    49 CGTSSIFHYWKCCGELNKECCFNLQTWVWVTLALF 83
Cdd:pfam10853   1 CPEESIFHYYKCCGDLNKECCFHLQTWVIVLLAVL 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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