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Conserved domains on  [gi|17543860|ref|NP_502573|]
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NADPH:adrenodoxin oxidoreductase, mitochondrial [Caenorhabditis elegans]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
23-451 3.65e-116

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 349.38  E-value: 3.65e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKPRLAIVGSGPAGMFACNGLL-RKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKnrERLKLFCNVN 101
Cdd:PLN02852  24 SEPLHVCVVGSGPAGFYTADKLLkAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATD--DRVSFFGNVT 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  102 IGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGVPNAS--TPDL-TTSNVVIVGNGNVALDC 178
Cdd:PLN02852 102 LGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVhlPPDLkSSDTAVVLGQGNVALDC 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  179 ARVLSTASSGLLRiSDIPGDRLNVLEGANVKDIKILGRRGPEHVSFTIKELREQFKIKDWdsKLEISEIDAKNLTESLPK 258
Cdd:PLN02852 182 ARILLRPTDELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNV--RVRIKEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  259 LE--RKKKRLTEVLVKNI-----GIANGLRQCHFIFHRIPEKIIA--DSNGKVQEIIVKNNE--------------TGQE 315
Cdd:PLN02852 259 LKasRPKRRVYELLSKAAaagkcAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERTVlegaagsgkqvavgTGEF 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  316 ETYPCGLLIYSIGYQTLVLDGVPQNDKKMIDMKDHCRVnMVAACSSQV----YATGWCAHGPHGIIVDTQQQSIFVADQI 391
Cdd:PLN02852 339 EDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRV-LSSASGADTepglYVVGWLKRGPTGIIGTNLTCAEETVASI 417
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17543860  392 AADFAQFKDST--------SNGVEELLEDRKVPFISWDEWKQIDRQEQDTGKLSGKIREKFTTFEKFL 451
Cdd:PLN02852 418 AEDLEQGRLRGvasppkpgRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEML 485
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
23-451 3.65e-116

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 349.38  E-value: 3.65e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKPRLAIVGSGPAGMFACNGLL-RKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKnrERLKLFCNVN 101
Cdd:PLN02852  24 SEPLHVCVVGSGPAGFYTADKLLkAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATD--DRVSFFGNVT 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  102 IGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGVPNAS--TPDL-TTSNVVIVGNGNVALDC 178
Cdd:PLN02852 102 LGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVhlPPDLkSSDTAVVLGQGNVALDC 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  179 ARVLSTASSGLLRiSDIPGDRLNVLEGANVKDIKILGRRGPEHVSFTIKELREQFKIKDWdsKLEISEIDAKNLTESLPK 258
Cdd:PLN02852 182 ARILLRPTDELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNV--RVRIKEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  259 LE--RKKKRLTEVLVKNI-----GIANGLRQCHFIFHRIPEKIIA--DSNGKVQEIIVKNNE--------------TGQE 315
Cdd:PLN02852 259 LKasRPKRRVYELLSKAAaagkcAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERTVlegaagsgkqvavgTGEF 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  316 ETYPCGLLIYSIGYQTLVLDGVPQNDKKMIDMKDHCRVnMVAACSSQV----YATGWCAHGPHGIIVDTQQQSIFVADQI 391
Cdd:PLN02852 339 EDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRV-LSSASGADTepglYVVGWLKRGPTGIIGTNLTCAEETVASI 417
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17543860  392 AADFAQFKDST--------SNGVEELLEDRKVPFISWDEWKQIDRQEQDTGKLSGKIREKFTTFEKFL 451
Cdd:PLN02852 418 AEDLEQGRLRGvasppkpgRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEML 485
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
23-377 2.00e-52

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 182.26  E-value: 2.00e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  23 SGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVINTFDAMFEKnrERLKLFCNVNI 102
Cdd:COG0493 120 TGK-KVAVVGSGPAGL-AAAYQLARAGHEVTVFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEA--LGVEFRTNVEV 194
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 103 GRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGVPNASTPDLTTSNVVIVGNGNVALDCARvl 182
Cdd:COG0493 195 GKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGEAPDTILAVGKRVVVIGGGNTAMDCAR-- 272
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 183 sTAssglLRisdipgdrlnvlEGAnvKDIKILGRRGPEHVSFTIKELREqfkikdwdskleiseidaknlteslpklerk 262
Cdd:COG0493 273 -TA----LR------------LGA--ESVTIVYRRTREEMPASKEEVEE------------------------------- 302
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 263 kkrltevlvkniGIANGlrqCHFIFHRIPEKIIADSNGKVQEIIVKNNE---------------TGQEETYPCGLLIYSI 327
Cdd:COG0493 303 ------------ALEEG---VEFLFLVAPVEIIGDENGRVTGLECVRMElgepdesgrrrpvpiEGSEFTLPADLVILAI 367
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 17543860 328 GYQ---TLVLD--GVPQNDKKMID-MKDHCRVNMvaacsSQVYATGWCAHGPHGII 377
Cdd:COG0493 368 GQTpdpSGLEEelGLELDKRGTIVvDEETYQTSL-----PGVFAGGDAVRGPSLVV 418
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
26-372 1.70e-07

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 52.71  E-value: 1.70e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860    26 PRLAIVGSGPAGMFACNGLlRKSNFSVDVFE-NSPVP-FGLVRYGVAPDHQEVKNVINTFDAMFEKNRERLKLFCN---- 99
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTL-AQLGGKVTLIEdEGTCPyGGCVLSKALLGAAEAPEIASLWADLYKRKEEVVKKLNNgiev 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   100 ------VNIGRD---ITFDELTRG------YDAVLLAYGSyKTRTLDIPGsDASNVISGSEFVGWYNGVPNASTPdlttS 164
Cdd:pfam07992  80 llgtevVSIDPGakkVVLEELVDGdgetitYDRLVIATGA-RPRLPPIPG-VELNVGFLVRTLDSAEALRLKLLP----K 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   165 NVVIVGNGNVALDCARVLSTAssgllrisdipgdrlnvleGANVkdikilgrrgpehvsfTIKELReqfkikDWDSKLEI 244
Cdd:pfam07992 154 RVVVVGGGYIGVELAAALAKL-------------------GKEV----------------TLIEAL------DRLLRAFD 192
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   245 SEIDAknlteslpklerkkkRLTEVLVKNiGIanglrqcHFIFHRIPEKIIADSNGKVQeiivknnETGQEETYPCGLLI 324
Cdd:pfam07992 193 EEISA---------------ALEKALEKN-GV-------EVRLGTSVKEIIGDGDGVEV-------ILKDGTEIDADLVV 242
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 17543860   325 YSIGY----QTLVLDGVPQNDKKMIDMKDHCRVNMvaacsSQVYATGWCAHG 372
Cdd:pfam07992 243 VAIGRrpntELLEAAGLELDERGGIVVDEYLRTSV-----PGIYAAGDCRVG 289
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
23-451 3.65e-116

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 349.38  E-value: 3.65e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKPRLAIVGSGPAGMFACNGLL-RKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKnrERLKLFCNVN 101
Cdd:PLN02852  24 SEPLHVCVVGSGPAGFYTADKLLkAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATD--DRVSFFGNVT 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  102 IGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGVPNAS--TPDL-TTSNVVIVGNGNVALDC 178
Cdd:PLN02852 102 LGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVhlPPDLkSSDTAVVLGQGNVALDC 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  179 ARVLSTASSGLLRiSDIPGDRLNVLEGANVKDIKILGRRGPEHVSFTIKELREQFKIKDWdsKLEISEIDAKNLTESLPK 258
Cdd:PLN02852 182 ARILLRPTDELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNV--RVRIKEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  259 LE--RKKKRLTEVLVKNI-----GIANGLRQCHFIFHRIPEKIIA--DSNGKVQEIIVKNNE--------------TGQE 315
Cdd:PLN02852 259 LKasRPKRRVYELLSKAAaagkcAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERTVlegaagsgkqvavgTGEF 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  316 ETYPCGLLIYSIGYQTLVLDGVPQNDKKMIDMKDHCRVnMVAACSSQV----YATGWCAHGPHGIIVDTQQQSIFVADQI 391
Cdd:PLN02852 339 EDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRV-LSSASGADTepglYVVGWLKRGPTGIIGTNLTCAEETVASI 417
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17543860  392 AADFAQFKDST--------SNGVEELLEDRKVPFISWDEWKQIDRQEQDTGKLSGKIREKFTTFEKFL 451
Cdd:PLN02852 418 AEDLEQGRLRGvasppkpgRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEML 485
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
23-377 2.00e-52

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 182.26  E-value: 2.00e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  23 SGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVINTFDAMFEKnrERLKLFCNVNI 102
Cdd:COG0493 120 TGK-KVAVVGSGPAGL-AAAYQLARAGHEVTVFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEA--LGVEFRTNVEV 194
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 103 GRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGVPNASTPDLTTSNVVIVGNGNVALDCARvl 182
Cdd:COG0493 195 GKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGEAPDTILAVGKRVVVIGGGNTAMDCAR-- 272
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 183 sTAssglLRisdipgdrlnvlEGAnvKDIKILGRRGPEHVSFTIKELREqfkikdwdskleiseidaknlteslpklerk 262
Cdd:COG0493 273 -TA----LR------------LGA--ESVTIVYRRTREEMPASKEEVEE------------------------------- 302
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 263 kkrltevlvkniGIANGlrqCHFIFHRIPEKIIADSNGKVQEIIVKNNE---------------TGQEETYPCGLLIYSI 327
Cdd:COG0493 303 ------------ALEEG---VEFLFLVAPVEIIGDENGRVTGLECVRMElgepdesgrrrpvpiEGSEFTLPADLVILAI 367
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 17543860 328 GYQ---TLVLD--GVPQNDKKMID-MKDHCRVNMvaacsSQVYATGWCAHGPHGII 377
Cdd:COG0493 368 GQTpdpSGLEEelGLELDKRGTIVvDEETYQTSL-----PGVFAGGDAVRGPSLVV 418
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
27-455 3.10e-49

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 175.46  E-value: 3.10e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   27 RLAIVGSGPAGMFACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKnrERLKLFCNVNIGRDI 106
Cdd:PTZ00188  41 KVGIIGAGPSALYCCKHLLKHERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLS--PNYRFFGNVHVGVDL 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  107 TFDELTRGYDAVLLAYGSYKTrTLDIPGSDASNVISGSE--------------FVGWYNGVPN-----------ASTPDL 161
Cdd:PTZ00188 119 KMEELRNHYNCVIFCCGASEV-SIPIGQQDEDKAVSGGEtnprkqngifhardLIYFYNNMYNdvrckavdnylNSFENF 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  162 TTSnvVIVGNGNVALDCARVLSTASSGLLRiSDIPGDRLNVLEGANVKDIKILGRRGPEHVSFTIKELREQFKIKD---- 237
Cdd:PTZ00188 198 TTS--IIIGNGNVSLDIARILIKSPDDLSK-TDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRELISLENtkvi 274
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  238 -----WDSKLEISEIDAK-NLTESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRIPEKI--IADSNGKVQEIIVKN 309
Cdd:PTZ00188 275 lskknYDLCCHLKSDEENtNMKKRQHEIFQKMVKNYEEVEKNKEFYKTYKIIEFIFYFEIRQIrpIDGAMKNVELELNKN 354
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  310 -----NETGQEETYPCGLLIYSIGYQTlvlDGVPQN--DKKMIDMKDHCRVNMVAacssqVYATGWCAHGPHG----IIV 378
Cdd:PTZ00188 355 vpmsfSSFKENKVLVTPLVIFATGFKK---SNFAENlyNQSVQMFKEDIGQHKFA-----IFKAGWFDKGPKGniasQIL 426
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17543860  379 DTQQQSIFVADqiaadFAQFKDST-SNGVEELLEDRKVPFISWDEWKQIDRQEQDTGKLSGKIREKFTTFEKFLTKLK 455
Cdd:PTZ00188 427 NSKNSTHLVLN-----FLQKVDIFfDNDISSLLKEKQIPYVSFDDWTYLHQLEKQMGAQQNKIAQKFSQTGEVLRILK 499
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
23-228 1.35e-34

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 134.15  E-value: 1.35e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVIntfdamfEKNRERL-----KLF 97
Cdd:PRK11749 139 TGK-KVAVIGAGPAGL-TAAHRLARKGYDVTIFEARDKAGGLLRYGI-PEFRLPKDIV-------DREVERLlklgvEIR 208
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   98 CNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVgwynGVPNASTPDLTTS---NVVIVGNGNV 174
Cdd:PRK11749 209 TNTEVGRDITLDELRAGYDAVFIGTGAGLPRFLGIPGENLGGVYSAVDFL----TRVNQAVADYDLPvgkRVVVIGGGNT 284
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 17543860  175 ALDCARvlsTAssgllrisdipgdrlnVLEGAnvKDIKILGRRGPEHVSFTIKE 228
Cdd:PRK11749 285 AMDAAR---TA----------------KRLGA--ESVTIVYRRGREEMPASEEE 317
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
23-378 4.11e-28

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 116.90  E-value: 4.11e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDH--------QEVKNVINTfdamfeknreRL 94
Cdd:PRK12771 136 TGK-RVAVIGGGPAGL-SAAYHLRRMGHAVTIFEAGPKLGGMMRYGI-PAYrlprevldAEIQRILDL----------GV 202
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   95 KLFCNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGvpnaSTPDLTTSNVVIVGNGNV 174
Cdd:PRK12771 203 EVRLGVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGE----GEPPFLGKRVVVIGGGNT 278
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  175 ALDCARvlsTASsgllrisdipgdRLnvleGAnvKDIKILGRRGPEHVS---FTIKE-LREQFKIKdwdskleiseidak 250
Cdd:PRK12771 279 AMDAAR---TAR------------RL----GA--EEVTIVYRRTREDMPahdEEIEEaLREGVEIN-------------- 323
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  251 nlTESLPKlerkkkrltEVLVKNIGIAnGLRQCHfifhriPEKIIADSNGKVQEIivknneTGQEETYPCGLLIYSIGyQ 330
Cdd:PRK12771 324 --WLRTPV---------EIEGDENGAT-GLRVIT------VEKMELDEDGRPSPV------TGEEETLEADLVVLAIG-Q 378
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 17543860  331 TLVL------DGVPQNDKKMIDMKDHcrvnMVAACSSqVYATGWCAHGPHGIIV 378
Cdd:PRK12771 379 DIDSaglesvPGVEVGRGVVQVDPNF----MMTGRPG-VFAGGDMVPGPRTVTT 427
gltD PRK12810
glutamate synthase subunit beta; Reviewed
20-180 8.61e-28

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 115.26  E-value: 8.61e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   20 RKLSGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVIntfdamfeknRERLKLF-- 97
Cdd:PRK12810 139 VKRTGK-KVAVVGSGPAGL-AAADQLARAGHKVTVFERADRIGGLLRYGI-PDFKLEKEVI----------DRRIELMea 205
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   98 ------CNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYN----GVPNASTPDLTTSNVV 167
Cdd:PRK12810 206 egiefrTNVEVGKDITAEELLAEYDAVFLGTGAYKPRDLGIPGRDLDGVHFAMDFLIQNTrrvlGDETEPFISAKGKHVV 285
                        170
                 ....*....|...
gi 17543860  168 IVGNGNVALDCAR 180
Cdd:PRK12810 286 VIGGGDTGMDCVG 298
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
23-231 5.41e-25

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 108.28  E-value: 5.41e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKpRLAIVGSGPAGMFACNGLLRKSNfSVDVFENSPVPFGLVRYGVaPDHQEVKNVINTFDAMFEKNRERLKlfCNVNI 102
Cdd:PRK12814 192 SGK-KVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGI-PRFRLPESVIDADIAPLRAMGAEFR--FNTVF 266
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  103 GRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNgVPNASTPDlttSNVVIVGNGNVALDCARvl 182
Cdd:PRK12814 267 GRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFLRNVA-LGTALHPG---KKVVVIGGGNTAIDAAR-- 340
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 17543860  183 sTAssglLRIsdipgdrlnvleGAnvKDIKILGRRGPEHVSFTIKELRE 231
Cdd:PRK12814 341 -TA----LRL------------GA--ESVTILYRRTREEMPANRAEIEE 370
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
25-207 3.83e-22

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 99.33  E-value: 3.83e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   25 KPRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEvKNVINTFDAMFEKNRERLKLfcNVNIGR 104
Cdd:PRK12809 310 SEKVAVIGAGPAGL-GCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLD-KTVLSQRREIFTAMGIDFHL--NCEIGR 385
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  105 DITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYN----GVPNASTPDLTT---SNVVIVGNGNVALD 177
Cdd:PRK12809 386 DITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTrqlmGLPESEEYPLTDvegKRVVVLGGGDTTMD 465
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 17543860  178 CARV---LSTASSGLLRISD---IPGDRLNVL----EGAN 207
Cdd:PRK12809 466 CLRTsirLNAASVTCAYRRDevsMPGSRKEVVnareEGVE 505
PRK13984 PRK13984
putative oxidoreductase; Provisional
27-222 3.23e-21

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 96.37  E-value: 3.23e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   27 RLAIVGSGPAGMFACNgLLRKSNFSVDVFENSPVPFGLVRYGVA----PDHQEVKNvINTFDAMfeknreRLKLFCNVNI 102
Cdd:PRK13984 285 KVAIVGSGPAGLSAAY-FLATMGYEVTVYESLSKPGGVMRYGIPsyrlPDEALDKD-IAFIEAL------GVKIHLNTRV 356
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  103 GRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISG----SEFVGWYNGvpNASTPDLTTSNVVIvGNGNVALDC 178
Cdd:PRK13984 357 GKDIPLEELREKHDAVFLSTGFTLGRSTRIPGTDHPDVIQAlpllREIRDYLRG--EGPKPKIPRSLVVI-GGGNVAMDI 433
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 17543860  179 ARVLS------------TASSGLLRISDIPGDRLNVLEGANvKDIKILGRRGPEHV 222
Cdd:PRK13984 434 ARSMArlqkmeygevnvKVTSLERTFEEMPADMEEIEEGLE-EGVVIYPGWGPMEV 488
PRK12831 PRK12831
putative oxidoreductase; Provisional
14-180 1.41e-20

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 93.93  E-value: 1.41e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   14 NLNLKSRKLSGKPRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVA----PDHQEVKNVINtfdamfek 89
Cdd:PRK12831 129 GIDLSETEEKKGKKVAVIGSGPAGL-TCAGDLAKMGYDVTIFEALHEPGGVLVYGIPefrlPKETVVKKEIE-------- 199
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   90 NRERL--KLFCNVNIGRDITFDEL--TRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYN----GVPNASTPDL 161
Cdd:PRK12831 200 NIKKLgvKIETNVVVGKTVTIDELleEEGFDAVFIGSGAGLPKFMGIPGENLNGVFSANEFLTRVNlmkaYKPEYDTPIK 279
                        170
                 ....*....|....*....
gi 17543860  162 TTSNVVIVGNGNVALDCAR 180
Cdd:PRK12831 280 VGKKVAVVGGGNVAMDAAR 298
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
23-179 2.14e-20

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 91.97  E-value: 2.14e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   23 SGKpRLAIVGSGPAGMFACnGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDAMFEKN---RERLKLFCN 99
Cdd:PRK12770  17 TGK-KVAIIGAGPAGLAAA-GYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEAGvvfHTRTKVCCG 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  100 VN---------IGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGW-----YNGVPNASTPDLTTSN 165
Cdd:PRK12770  95 EPlheeegdefVERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLFRiraakLGYLPWEKVPPVEGKK 174
                        170
                 ....*....|....
gi 17543860  166 VVIVGNGNVALDCA 179
Cdd:PRK12770 175 VVVVGAGLTAVDAA 188
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
14-180 3.39e-18

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 87.49  E-value: 3.39e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   14 NLNLKSRKLSGKPRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVIntfDAMFEkNRER 93
Cdd:PRK12778 420 NISVPEVAEKNGKKVAVIGSGPAGL-SFAGDLAKRGYDVTVFEALHEIGGVLKYGI-PEFRLPKKIV---DVEIE-NLKK 493
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   94 L--KLFCNVNIGRDITFDEL-TRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGV----PNASTPDLTTSNV 166
Cdd:PRK12778 494 LgvKFETDVIVGKTITIEELeEEGFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYLTRVNLMdaasPDSDTPIKFGKKV 573
                        170
                 ....*....|....
gi 17543860  167 VIVGNGNVALDCAR 180
Cdd:PRK12778 574 AVVGGGNTAMDSAR 587
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
27-181 4.10e-18

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 87.30  E-value: 4.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860    27 RLAIVGSGPAGMFACNGLLRkSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVIntfDAMFEKNRER-LKLFCNVNIGRD 105
Cdd:PRK12775  432 KVAICGSGPAGLAAAADLVK-YGVDVTVYEALHVVGGVLQYGI-PSFRLPRDII---DREVQRLVDIgVKIETNKVIGKT 506
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   106 ITFDELT--RGYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYN-----GVPNASTPDLTTSNVVIVGNGNVALDC 178
Cdd:PRK12775  507 FTVPQLMndKGFDAVFLGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNlmggdKFPFLDTPISLGKSVVVIGAGNTAMDC 586

                  ...
gi 17543860   179 ARV 181
Cdd:PRK12775  587 LRV 589
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
21-180 2.72e-16

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 81.33  E-value: 2.72e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   21 KLSGKpRLAIVGSGPAGMfACNGLLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVINTFDAMFEKNRERLKLFCNV 100
Cdd:PRK12769 324 TKSDK-RVAIIGAGPAGL-ACADVLARNGVAVTVYDRHPEIGGLLTFGI-PAFKLDKSLLARRREIFSAMGIEFELNCEV 400
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  101 niGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNV-------ISGSEFVGWYNGVPNASTPDLTTSNVVIVGNGN 173
Cdd:PRK12769 401 --GKDISLESLLEDYDAVFVGVGTYRSMKAGLPNEDAPGVydalpflIANTKQVMGLEELPEEPFINTAGLNVVVLGGGD 478

                 ....*..
gi 17543860  174 VALDCAR 180
Cdd:PRK12769 479 TAMDCVR 485
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
25-180 3.58e-12

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 68.71  E-value: 3.58e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   25 KPRLAIVGSGPAGMFacNG-LLRKSNFSVDVFENSPVPFGLVRYGVaPDHQEVKNVIntfDAMFEKNRERLKLFC-NVNI 102
Cdd:PRK12779 306 KPPIAVVGSGPSGLI--NAyLLAVEGFPVTVFEAFHDLGGVLRYGI-PEFRLPNQLI---DDVVEKIKLLGGRFVkNFVV 379
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  103 GRDITFDELTR-GYDAVLLAYGSYKTRTLDIPGSDASNVISGSEFVGWYNGV----PNAST--PDLTTSNVVIVGNGNVA 175
Cdd:PRK12779 380 GKTATLEDLKAaGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFLTRVNLMrgldDDYETplPEVKGKEVFVIGGGNTA 459

                 ....*
gi 17543860  176 LDCAR 180
Cdd:PRK12779 460 MDAAR 464
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
26-372 1.70e-07

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 52.71  E-value: 1.70e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860    26 PRLAIVGSGPAGMFACNGLlRKSNFSVDVFE-NSPVP-FGLVRYGVAPDHQEVKNVINTFDAMFEKNRERLKLFCN---- 99
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTL-AQLGGKVTLIEdEGTCPyGGCVLSKALLGAAEAPEIASLWADLYKRKEEVVKKLNNgiev 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   100 ------VNIGRD---ITFDELTRG------YDAVLLAYGSyKTRTLDIPGsDASNVISGSEFVGWYNGVPNASTPdlttS 164
Cdd:pfam07992  80 llgtevVSIDPGakkVVLEELVDGdgetitYDRLVIATGA-RPRLPPIPG-VELNVGFLVRTLDSAEALRLKLLP----K 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   165 NVVIVGNGNVALDCARVLSTAssgllrisdipgdrlnvleGANVkdikilgrrgpehvsfTIKELReqfkikDWDSKLEI 244
Cdd:pfam07992 154 RVVVVGGGYIGVELAAALAKL-------------------GKEV----------------TLIEAL------DRLLRAFD 192
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860   245 SEIDAknlteslpklerkkkRLTEVLVKNiGIanglrqcHFIFHRIPEKIIADSNGKVQeiivknnETGQEETYPCGLLI 324
Cdd:pfam07992 193 EEISA---------------ALEKALEKN-GV-------EVRLGTSVKEIIGDGDGVEV-------ILKDGTEIDADLVV 242
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 17543860   325 YSIGY----QTLVLDGVPQNDKKMIDMKDHCRVNMvaacsSQVYATGWCAHG 372
Cdd:pfam07992 243 VAIGRrpntELLEAAGLELDERGGIVVDEYLRTSV-----PGIYAAGDCRVG 289
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
28-330 4.46e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 48.19  E-value: 4.46e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  28 LAIVGSGPAGMFAcnGL-LRKSNFSVDVFE---------------NSP-VPFGL-------------VRYGVAPDHQEVK 77
Cdd:COG0492   3 VVIIGAGPAGLTA--AIyAARAGLKTLVIEggepggqlattkeieNYPgFPEGIsgpelaerlreqaERFGAEILLEEVT 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860  78 NVintfdaMFEKNRERLKLfcnvNIGRDITFDeltrgydAVLLAYGSYKtRTLDIPGSDasnvisgsEFVGwyNGVPNAS 157
Cdd:COG0492  81 SV------DKDDGPFRVTT----DDGTEYEAK-------AVIIATGAGP-RKLGLPGEE--------EFEG--RGVSYCA 132
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 158 TPDL---TTSNVVIVGNGNVALDCARVLSTASsgllrisdipgdrlnvleganvKDIKILGRRgpehvsftiKELREqfk 234
Cdd:COG0492 133 TCDGfffRGKDVVVVGGGDSALEEALYLTKFA----------------------SKVTLIHRR---------DELRA--- 178
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17543860 235 ikdwdskleiSEIDAKNLtESLPKLErkkkrltevlvknigianglrqchFIFHRIPEKIIADsnGKVQEIIVKNNETGQ 314
Cdd:COG0492 179 ----------SKILVERL-RANPKIE------------------------VLWNTEVTEIEGD--GRVEGVTLKNVKTGE 221
                       330
                ....*....|....*.
gi 17543860 315 EETYPCGLLIYSIGYQ 330
Cdd:COG0492 222 EKELEVDGVFVAIGLK 237
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
30-73 1.94e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 42.13  E-value: 1.94e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 17543860    30 IVGSGPAGM-FACngLLRKSNFSVDVFENSPVPFGLVRYGVAPDH 73
Cdd:pfam13450   1 IVGAGLAGLvAAA--LLAKRGFRVLVLEKRDRLGGNAYSYRVPGY 43
PRK07236 PRK07236
hypothetical protein; Provisional
20-61 1.71e-03

hypothetical protein; Provisional


Pssm-ID: 235980 [Multi-domain]  Cd Length: 386  Bit Score: 40.68  E-value: 1.71e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 17543860   20 RKLSGKPRLAIVGSGPAGMFACNgLLRKSNFSVDVFENSPVP 61
Cdd:PRK07236   1 MTHMSGPRAVVIGGSLGGLFAAL-LLRRAGWDVDVFERSPTE 41
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
6-56 6.03e-03

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 38.94  E-value: 6.03e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 17543860   6 LLRRIACSNLNLKSrklsGKPRLAIVGSGPAGMFACNGLLRkSNFSVDVFE 56
Cdd:COG2509  15 ALKAAIAKKLGIPS----LKYDVVIVGAGPAGLFAALELAE-AGLKPLVLE 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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