|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
36-240 |
1.48e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 36 QMRKdhANELKKKSDEAYNNDMEELKKT--------RSAFDQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEASH 107
Cdd:PTZ00121 1624 ELKK--AEEEKKKVEQLKKKEAEEKKKAeelkkaeeENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA 1701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 108 GMAMKMMVREHAEKMK--------ELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSM---KIALV 176
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKaeelkkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIrkeKEAVI 1781
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17542586 177 EEEKQKIMKERSDELEKYTREMNEMAKNHQEERKKHNAIIGQKKmEMIGSKRDQLKIESEKILE 240
Cdd:PTZ00121 1782 EEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSK-EMEDSAIKEVADSKNMQLE 1844
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
51-250 |
1.38e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.28 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 51 EAYNNDMEELKKTRSAFDQEIAKRHAAADmQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKmKELRSEGR 130
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLE-EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL-TLLNEEAA 820
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 131 EAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSM------------KIALVEEEKQKI---MKERSDELEKYT 195
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIeeleelieelesELEALLNERASLeeaLALLRSELEELS 900
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 17542586 196 REMNEMAKNHQEERKKHNAIigQKKMEMIGSKRDQLKIESEKILESMRNDINLLL 250
Cdd:TIGR02168 901 EELRELESKRSELRRELEEL--REKLAQLELRLEGLEVRIDNLQERLSEEYSLTL 953
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
36-240 |
4.77e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.34 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 36 QMRKDHANELKKKsdeaynNDMEELKKTRsafdQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEA----SHGMAM 111
Cdd:pfam17380 303 QEKEEKAREVERR------RKLEEAEKAR----QAEMDRQAAIYAEQERMAMERERELERIRQEERKRELerirQEEIAM 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 112 KMmvrehaEKMKELRSEGREAQERAER-----EHRMKMSEAEEEHRKEKEIAQEKMDAAKREG----SMKIALVEEEKQK 182
Cdd:pfam17380 373 EI------SRMRELERLQMERQQKNERvrqelEAARKVKILEEERQRKIQQQKVEMEQIRAEQeearQREVRRLEEERAR 446
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 183 IMkERSDELEKYTREMNEMAKNHQEERKKhnaiigqKKMEMIGSKRDQLKIESE--KILE 240
Cdd:pfam17380 447 EM-ERVRLEEQERQQQVERLRQQEEERKR-------KKLELEKEKRDRKRAEEQrrKILE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
51-256 |
6.78e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 38.76 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 51 EAYNNDMEELKKTRSAFDQEIAKRHAAADmQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKMKELRSEGR 130
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELE-ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 131 EAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYTREMNEMAKNHQEERK 210
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 17542586 211 KHNAIigQKKMEMIGSKRDQLKIESEKILESMRNDINLLLAVEIKQ 256
Cdd:COG1196 401 QLEEL--EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
36-240 |
1.48e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 36 QMRKdhANELKKKSDEAYNNDMEELKKT--------RSAFDQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEASH 107
Cdd:PTZ00121 1624 ELKK--AEEEKKKVEQLKKKEAEEKKKAeelkkaeeENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEA 1701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 108 GMAMKMMVREHAEKMK--------ELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSM---KIALV 176
Cdd:PTZ00121 1702 KKAEELKKKEAEEKKKaeelkkaeEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIrkeKEAVI 1781
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 17542586 177 EEEKQKIMKERSDELEKYTREMNEMAKNHQEERKKHNAIIGQKKmEMIGSKRDQLKIESEKILE 240
Cdd:PTZ00121 1782 EEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSK-EMEDSAIKEVADSKNMQLE 1844
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
44-256 |
2.37e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 44 ELKKKSDEAYNNDM---EELKKTRSAFDQEIAKRHAA-ADMQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHA 119
Cdd:PTZ00121 1567 EEAKKAEEDKNMALrkaEEAKKAEEARIEEVMKLYEEeKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK 1646
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 120 EKMKELRSEGREAQERAEREHRMKMSEA--------EEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDEL 191
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEEDKkkaeeakkAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 17542586 192 EKYTReMNEMAKNHQEERKKHNAIigqKKMEMIGSKRDQLKIESEKILESMRNDINLLLAVEIKQ 256
Cdd:PTZ00121 1727 ENKIK-AEEAKKEAEEDKKKAEEA---KKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE 1787
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
39-237 |
3.47e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 39 KDHANELKKKSDEAYNNDmEELKKTRSAFDQEIAKRHAAADMQMSELvKSNNTELKTLQDQFNRDEASHGMAMKMMVREH 118
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAE-EAKKKAEEAKKADEAKKKAEEAKKADEA-KKKAEEAKKKADEAKKAAEAKKKADEAKKAEE 1520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 119 AEKMKELR--SEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVE--EEKQKIMKERSDELEKY 194
Cdd:PTZ00121 1521 AKKADEAKkaEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRkaEEAKKAEEARIEEVMKL 1600
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 17542586 195 TREMNEM----AKNHQEERKKHNAIigqKKMEMIGSKRDQLKIESEK 237
Cdd:PTZ00121 1601 YEEEKKMkaeeAKKAEEAKIKAEEL---KKAEEEKKKVEQLKKKEAE 1644
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
42-238 |
4.57e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 4.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 42 ANELKKKSDEAYNNDMEELKKTRSAFDQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMvrEHAEK 121
Cdd:PTZ00121 1232 AEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKA--DEAKK 1309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 122 MKELRSEGREAQERAErEHRMKMSEAE---EEHRKEKEIAQEKMDAAKRE--GSMKIALVEEEKQKIMKERSDELEKYTR 196
Cdd:PTZ00121 1310 KAEEAKKADEAKKKAE-EAKKKADAAKkkaEEAKKAAEAAKAEAEAAADEaeAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 17542586 197 EM---NEMAKNHQEERKKHNAIigqKKMEMIGSKRDQLKIESEKI 238
Cdd:PTZ00121 1389 EKkkaDEAKKKAEEDKKKADEL---KKAAAAKKKADEAKKKAEEK 1430
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
51-250 |
1.38e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.28 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 51 EAYNNDMEELKKTRSAFDQEIAKRHAAADmQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKmKELRSEGR 130
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLE-EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL-TLLNEEAA 820
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 131 EAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSM------------KIALVEEEKQKI---MKERSDELEKYT 195
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIeeleelieelesELEALLNERASLeeaLALLRSELEELS 900
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 17542586 196 REMNEMAKNHQEERKKHNAIigQKKMEMIGSKRDQLKIESEKILESMRNDINLLL 250
Cdd:TIGR02168 901 EELRELESKRSELRRELEEL--REKLAQLELRLEGLEVRIDNLQERLSEEYSLTL 953
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
7-276 |
2.52e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 7 AEGAKMASGAAKETSSNLFGIWDTWNSNPQMRKDHANELKKKSDEAYNNDMEELKKTRSAFDQEIAKRHAAADMQMSELV 86
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 87 KSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKMKELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAK 166
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK 1483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 167 REGSMKiALVEEEKQKI--------MKERSDELEKYTREMN-EMAKNHQEERKKHNAIIGQ--------KKMEMIGSKRD 229
Cdd:PTZ00121 1484 KADEAK-KKAEEAKKKAdeakkaaeAKKKADEAKKAEEAKKaDEAKKAEEAKKADEAKKAEekkkadelKKAEELKKAEE 1562
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 17542586 230 QLKIESEKILESMRNdINLLLAVEIKQNGSHLVEKLIDLFESVKTVK 276
Cdd:PTZ00121 1563 KKKAEEAKKAEEDKN-MALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
39-237 |
5.05e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 39 KDHANELKKKSDEAynNDMEELKKTRsafdQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEASH--GMAMKMMVR 116
Cdd:PTZ00121 1301 KKKADEAKKKAEEA--KKADEAKKKA----EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEekAEAAEKKKE 1374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 117 EHAEKMKELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYT- 195
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAe 1454
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 17542586 196 --REMNEMAKNHQEERKKHNAiigqKKMEMIGSKRDQLKIESEK 237
Cdd:PTZ00121 1455 eaKKAEEAKKKAEEAKKADEA----KKKAEEAKKADEAKKKAEE 1494
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
42-237 |
4.56e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 42 ANELKKKSDEAYNND----MEELKKTRSAFDQEIAKRhaAADMQMSELVKSNNtELKTLQDQFNRDEASHGMAMKMMVRE 117
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEeakkADEAKKAEEAKKADEAKK--AEEKKKADELKKAE-ELKKAEEKKKAEEAKKAEEDKNMALR 1581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 118 HAEKMK--------------ELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKI 183
Cdd:PTZ00121 1582 KAEEAKkaeearieevmklyEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 17542586 184 MKERSDELEKYTREMNEMAKNHQEERKKHNAIIGQKKMEMIGSKRDQLKIESEK 237
Cdd:PTZ00121 1662 KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEK 1715
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
36-240 |
4.77e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.34 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 36 QMRKDHANELKKKsdeaynNDMEELKKTRsafdQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEA----SHGMAM 111
Cdd:pfam17380 303 QEKEEKAREVERR------RKLEEAEKAR----QAEMDRQAAIYAEQERMAMERERELERIRQEERKRELerirQEEIAM 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 112 KMmvrehaEKMKELRSEGREAQERAER-----EHRMKMSEAEEEHRKEKEIAQEKMDAAKREG----SMKIALVEEEKQK 182
Cdd:pfam17380 373 EI------SRMRELERLQMERQQKNERvrqelEAARKVKILEEERQRKIQQQKVEMEQIRAEQeearQREVRRLEEERAR 446
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 183 IMkERSDELEKYTREMNEMAKNHQEERKKhnaiigqKKMEMIGSKRDQLKIESE--KILE 240
Cdd:pfam17380 447 EM-ERVRLEEQERQQQVERLRQQEEERKR-------KKLELEKEKRDRKRAEEQrrKILE 498
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
51-256 |
6.78e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 38.76 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 51 EAYNNDMEELKKTRSAFDQEIAKRHAAADmQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKMKELRSEGR 130
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELE-ELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 131 EAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYTREMNEMAKNHQEERK 210
Cdd:COG1196 321 LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAA 400
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 17542586 211 KHNAIigQKKMEMIGSKRDQLKIESEKILESMRNDINLLLAVEIKQ 256
Cdd:COG1196 401 QLEEL--EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
128-248 |
7.78e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 38.65 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 128 EGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYTREMNEMAKNHQE 207
Cdd:PRK00409 523 ASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQAIKEAKKEADEIIKELRQLQKGGYA 602
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 17542586 208 ERKKHNAIIGQKKMEmigskrDQLKIESEKILESMRNDINL 248
Cdd:PRK00409 603 SVKAHELIEARKRLN------KANEKKEKKKKKQKEKQEEL 637
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
44-221 |
9.44e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 38.18 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 44 ELKKKSDEAYNNDMEELKKTRSAFDQEIAKRHAAADMQMSELVKSNNTELKTLQDQFNRDEASHGMAMKMMVREHAEKmK 123
Cdd:pfam17380 409 EERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDR-K 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 124 ELRSEGREAQERAEREHRMKMSEaEEEHRK--EKEIaQEKMDAAKREGSMKIALVEEEKQKIMKERsdelekytREMNEM 201
Cdd:pfam17380 488 RAEEQRRKILEKELEERKQAMIE-EERKRKllEKEM-EERQKAIYEEERRREAEEERRKQQEMEER--------RRIQEQ 557
|
170 180
....*....|....*....|
gi 17542586 202 AKNHQEERKKHNAIIGQKKM 221
Cdd:pfam17380 558 MRKATEERSRLEAMEREREM 577
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
117-237 |
9.49e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 38.40 E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17542586 117 EHAEKMKELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEKMDAAKREGSMKIALVEEEKQKIMKERSDELEKYTR 196
Cdd:COG5185 253 DKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAAEAEQELEESKR 332
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 17542586 197 EMNEMAKNHQEERKKHNAIIgQKKMEMIGSKRDQLKIESEK 237
Cdd:COG5185 333 ETETGIQNLTAEIEQGQESL-TENLEAIKEEIENIVGEVEL 372
|
|
|