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Conserved domains on  [gi|71982506|ref|NP_504888|]
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DUF1248 domain-containing protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Acetyltransf_18 super family cl40257
Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that ...
 170-242 2.40e-07

Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that is related to pfam06852.


The actual alignment was detected with superfamily member pfam18014:

Pssm-ID: 436212  Cd Length: 123  Bit Score: 48.82  E-value: 2.40e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 71982506   170 AYDRTICIRDRKKIMTAWFNLSDTfTRVVLDDTGKIVGYGTIRIVSQNkLSSAPFYADCLEAAVVLLADLLNN 242
Cdd:pfam18014   3 ELDREAFGADRSAFLKRRLKQADQ-VAVVRNEDGEIRGYGLARRCPAG-LKIGPLVANNEEIALALIRALAAN 73
 
Name Accession Description Interval E-value
Acetyltransf_18 pfam18014
Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that ...
 170-242 2.40e-07

Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that is related to pfam06852.


Pssm-ID: 436212  Cd Length: 123  Bit Score: 48.82  E-value: 2.40e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 71982506   170 AYDRTICIRDRKKIMTAWFNLSDTfTRVVLDDTGKIVGYGTIRIVSQNkLSSAPFYADCLEAAVVLLADLLNN 242
Cdd:pfam18014   3 ELDREAFGADRSAFLKRRLKQADQ-VAVVRNEDGEIRGYGLARRCPAG-LKIGPLVANNEEIALALIRALAAN 73
 
Name Accession Description Interval E-value
Acetyltransf_18 pfam18014
Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that ...
 170-242 2.40e-07

Acetyltransferase (GNAT) domain; This entry represents a likely acetyltransferase enzyme that is related to pfam06852.


Pssm-ID: 436212  Cd Length: 123  Bit Score: 48.82  E-value: 2.40e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 71982506   170 AYDRTICIRDRKKIMTAWFNLSDTfTRVVLDDTGKIVGYGTIRIVSQNkLSSAPFYADCLEAAVVLLADLLNN 242
Cdd:pfam18014   3 ELDREAFGADRSAFLKRRLKQADQ-VAVVRNEDGEIRGYGLARRCPAG-LKIGPLVANNEEIALALIRALAAN 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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