NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|25150339|ref|NP_505645|]
View 

CX domain-containing protein [Caenorhabditis elegans]

Protein Classification

CX domain-containing protein( domain architecture ID 10484168)

CX domain-containing protein similar to Caenorhabditis elegans protein C07A9.12

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
CX pfam01705
CX module; This domain has no known function. It is found in several C. elegans proteins. The ...
 124-187 4.87e-24

CX module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 6 conserved cysteines that probably form three disulphide bridges.


:

Pssm-ID: 396323  Cd Length: 59  Bit Score: 91.17  E-value: 4.87e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 25150339   124 YYWDSRYAQEKisptEFPVMCEYQIGEDDGQLQNVTFANGSHARSLFFGCPgSMLDCCGMYCCH 187
Cdd:pfam01705   1 YYWDGHYVPTP----ERPNVCEYPISEDDWELGNVTFPNGTRPKSIFFGCH-SSEECCGLECCS 59
 
Name Accession Description Interval E-value
CX pfam01705
CX module; This domain has no known function. It is found in several C. elegans proteins. The ...
 124-187 4.87e-24

CX module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 6 conserved cysteines that probably form three disulphide bridges.


Pssm-ID: 396323  Cd Length: 59  Bit Score: 91.17  E-value: 4.87e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 25150339   124 YYWDSRYAQEKisptEFPVMCEYQIGEDDGQLQNVTFANGSHARSLFFGCPgSMLDCCGMYCCH 187
Cdd:pfam01705   1 YYWDGHYVPTP----ERPNVCEYPISEDDWELGNVTFPNGTRPKSIFFGCH-SSEECCGLECCS 59
 
Name Accession Description Interval E-value
CX pfam01705
CX module; This domain has no known function. It is found in several C. elegans proteins. The ...
 124-187 4.87e-24

CX module; This domain has no known function. It is found in several C. elegans proteins. The domain contains 6 conserved cysteines that probably form three disulphide bridges.


Pssm-ID: 396323  Cd Length: 59  Bit Score: 91.17  E-value: 4.87e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 25150339   124 YYWDSRYAQEKisptEFPVMCEYQIGEDDGQLQNVTFANGSHARSLFFGCPgSMLDCCGMYCCH 187
Cdd:pfam01705   1 YYWDGHYVPTP----ERPNVCEYPISEDDWELGNVTFPNGTRPKSIFFGCH-SSEECCGLECCS 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH