Histone H1.X [Caenorhabditis elegans]
histone H1/H5 family protein( domain architecture ID 10455480)
histone H1/H5 family protein similar to a linker histone (H1 or H5), which is a chromatin-associated protein that binds to the exterior of nucleosomes and dramatically stabilizes the highly condensed states of chromatin fibers
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Linker_histone | pfam00538 | linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin ... |
37-108 | 1.48e-24 | ||
linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. : Pssm-ID: 459846 [Multi-domain] Cd Length: 71 Bit Score: 92.20 E-value: 1.48e-24
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Name | Accession | Description | Interval | E-value | ||
Linker_histone | pfam00538 | linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin ... |
37-108 | 1.48e-24 | ||
linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. Pssm-ID: 459846 [Multi-domain] Cd Length: 71 Bit Score: 92.20 E-value: 1.48e-24
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H15 | cd00073 | linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, ... |
34-112 | 4.88e-19 | ||
linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated proteins that bind to the exterior of nucleosomes and dramatically stabilize the highly condensed states of chromatin fibers; stabilization of higher order folding occurs through electrostatic neutralization of the linker DNA segments, through a highly positively charged carboxy- terminal domain known as the AKP helix (Ala, Lys, Pro); thought to be involved in specific protein-protein and protein-DNA interactions and play a role in suppressing core histone tail domain acetylation in the chromatin fiber Pssm-ID: 238028 [Multi-domain] Cd Length: 88 Bit Score: 78.43 E-value: 4.88e-19
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H15 | smart00526 | Domain in histone families 1 and 5; |
34-101 | 3.73e-18 | ||
Domain in histone families 1 and 5; Pssm-ID: 197772 [Multi-domain] Cd Length: 66 Bit Score: 75.69 E-value: 3.73e-18
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Name | Accession | Description | Interval | E-value | ||
Linker_histone | pfam00538 | linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin ... |
37-108 | 1.48e-24 | ||
linker histone H1 and H5 family; Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. Pssm-ID: 459846 [Multi-domain] Cd Length: 71 Bit Score: 92.20 E-value: 1.48e-24
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H15 | cd00073 | linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, ... |
34-112 | 4.88e-19 | ||
linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated proteins that bind to the exterior of nucleosomes and dramatically stabilize the highly condensed states of chromatin fibers; stabilization of higher order folding occurs through electrostatic neutralization of the linker DNA segments, through a highly positively charged carboxy- terminal domain known as the AKP helix (Ala, Lys, Pro); thought to be involved in specific protein-protein and protein-DNA interactions and play a role in suppressing core histone tail domain acetylation in the chromatin fiber Pssm-ID: 238028 [Multi-domain] Cd Length: 88 Bit Score: 78.43 E-value: 4.88e-19
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H15 | smart00526 | Domain in histone families 1 and 5; |
34-101 | 3.73e-18 | ||
Domain in histone families 1 and 5; Pssm-ID: 197772 [Multi-domain] Cd Length: 66 Bit Score: 75.69 E-value: 3.73e-18
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Blast search parameters | ||||
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