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Conserved domains on  [gi|17551522|ref|NP_509701|]
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Nose resistant-to-fluoxetine protein N-terminal domain-containing protein [Caenorhabditis elegans]

Protein Classification

NRF and OafA domain-containing protein( domain architecture ID 10653765)

NRF and OafA domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NRF smart00703
N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to ...
76-183 2.65e-31

N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to nordihydroguaiaretic acid-4); Also present in several other worm and fly proteins.


:

Pssm-ID: 214781  Cd Length: 110  Bit Score: 117.83  E-value: 2.65e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522     76 NLYAIQELDSFGKLPvPGMLEVATLYDGSYQECKRVSGV----KYNTNYCYLMLKPGKNASCSASGSSSaysMLPMRLAV 151
Cdd:smart00703   1 NLWALKQLDAWGKFP-SGLLEGNNLWLGSYEECLRISGPgtstKYQGKYCYLPLVPGKNLNCSIKSLTS---VLVLRTGV 76
                           90       100       110
                   ....*....|....*....|....*....|....
gi 17551522    152 CLPDSCNQHEIIDIFNQLSPY--PFTACHAYCSE 183
Cdd:smart00703  77 CLPSSCSAADLKTLLNQLSKDlnPFTVCEAFCSV 110
OafA COG1835
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains ...
253-656 6.27e-25

Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 441440  Cd Length: 309  Bit Score: 105.88  E-value: 6.27e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 253 QKPGFIKSLDCIRLFSMCWVVTGHSFIYlvlsdtfmpvidFPKHFWNHLLLNAFVSVDTFFVLSGLVLTYMFFKTTPKKK 332
Cdd:COG1835   3 SSRRRLPSLDGLRGLAALLVVLYHAFLL------------FPPGPLGGLLSGGFLGVDVFFVLSGFLITRSLLRRLERGG 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 333 MivnpvTWIMFYVHRYLRLTPPIMLFIGFftvyapyiqgpfsasqmnqlvmeadeckttwwqnllyindfassnsmgcYG 412
Cdd:COG1835  71 F-----SLRRFYLRRFLRIYPAYLVVLLL-------------------------------------------------TG 96
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 413 PTWYLAVDTQLYLVAPIVLIGLYFSFAVGTGLIVAGCVGSIITTYILFsvynlpadmFGNGSGTNFFTiayekpwvrcPP 492
Cdd:COG1835  97 HLWSLSVELQFYLLFPLLLLLLRRLRRRLLALLALLALASLLLLALLL---------TGDPSAAYFLT----------LT 157
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 493 YLVGMLTGYLLAVYGNRKIRLNWVLSLAGwiIAVVIAGFCLFATYDYDKGSHWSVFTrgtfynfhrlgwGMFICWVVAan 572
Cdd:COG1835 158 RLWEFLLGALLALLYRRLRRLRRLLALAG--LALLLAALLLLDGAPFPGFGLLPLLA------------ALLVLAAAA-- 221
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 573 hmgWGGPIDKFMSHPIWQPFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYT--SIPATFLSYIFaffwsclFE 650
Cdd:COG1835 222 ---GSGLLSRLLSSRPLVFLGDISYSLYLWHWPVLVLLLALLGRLLGPAPLLLLLLALalSLALAALSYRL-------VE 291

                ....*.
gi 17551522 651 IPTLKL 656
Cdd:COG1835 292 RPARRL 297
 
Name Accession Description Interval E-value
NRF smart00703
N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to ...
76-183 2.65e-31

N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to nordihydroguaiaretic acid-4); Also present in several other worm and fly proteins.


Pssm-ID: 214781  Cd Length: 110  Bit Score: 117.83  E-value: 2.65e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522     76 NLYAIQELDSFGKLPvPGMLEVATLYDGSYQECKRVSGV----KYNTNYCYLMLKPGKNASCSASGSSSaysMLPMRLAV 151
Cdd:smart00703   1 NLWALKQLDAWGKFP-SGLLEGNNLWLGSYEECLRISGPgtstKYQGKYCYLPLVPGKNLNCSIKSLTS---VLVLRTGV 76
                           90       100       110
                   ....*....|....*....|....*....|....
gi 17551522    152 CLPDSCNQHEIIDIFNQLSPY--PFTACHAYCSE 183
Cdd:smart00703  77 CLPSSCSAADLKTLLNQLSKDlnPFTVCEAFCSV 110
OafA COG1835
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains ...
253-656 6.27e-25

Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441440  Cd Length: 309  Bit Score: 105.88  E-value: 6.27e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 253 QKPGFIKSLDCIRLFSMCWVVTGHSFIYlvlsdtfmpvidFPKHFWNHLLLNAFVSVDTFFVLSGLVLTYMFFKTTPKKK 332
Cdd:COG1835   3 SSRRRLPSLDGLRGLAALLVVLYHAFLL------------FPPGPLGGLLSGGFLGVDVFFVLSGFLITRSLLRRLERGG 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 333 MivnpvTWIMFYVHRYLRLTPPIMLFIGFftvyapyiqgpfsasqmnqlvmeadeckttwwqnllyindfassnsmgcYG 412
Cdd:COG1835  71 F-----SLRRFYLRRFLRIYPAYLVVLLL-------------------------------------------------TG 96
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 413 PTWYLAVDTQLYLVAPIVLIGLYFSFAVGTGLIVAGCVGSIITTYILFsvynlpadmFGNGSGTNFFTiayekpwvrcPP 492
Cdd:COG1835  97 HLWSLSVELQFYLLFPLLLLLLRRLRRRLLALLALLALASLLLLALLL---------TGDPSAAYFLT----------LT 157
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 493 YLVGMLTGYLLAVYGNRKIRLNWVLSLAGwiIAVVIAGFCLFATYDYDKGSHWSVFTrgtfynfhrlgwGMFICWVVAan 572
Cdd:COG1835 158 RLWEFLLGALLALLYRRLRRLRRLLALAG--LALLLAALLLLDGAPFPGFGLLPLLA------------ALLVLAAAA-- 221
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 573 hmgWGGPIDKFMSHPIWQPFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYT--SIPATFLSYIFaffwsclFE 650
Cdd:COG1835 222 ---GSGLLSRLLSSRPLVFLGDISYSLYLWHWPVLVLLLALLGRLLGPAPLLLLLLALalSLALAALSYRL-------VE 291

                ....*.
gi 17551522 651 IPTLKL 656
Cdd:COG1835 292 RPARRL 297
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
258-642 1.05e-15

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 78.75  E-value: 1.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   258 IKSLDCIRLFSMCWVVTGHSFIYLVlsdtFMPVIDFPKHFWNHLLLNAFVSVDTFFVLSGLVLTYMFFKTTPkkkmivnp 337
Cdd:pfam01757   1 IAYLDLLRGIAILLVVIGHVLLAFG----YGGFGLPLELALLFLVFLGRFGVPLFFFISGYLLAALRRRRRS-------- 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   338 vtWIMFYVHRYLRLTPPIMLFIGFFTVYapyiqgpfsasqmnQLVMEADECKTTWWQNLLYINDFASSNsmGCYGPTWYL 417
Cdd:pfam01757  69 --LFKFIKKRLLRLLIPYLLWSLLYALL--------------LLLVAGLSVGGALLLLLLLNNGPLFFL--GVNGHLWFL 130
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   418 AVDTQLYLVAPIvligLYFSFAVGTGLIVAGCVGSIITTYILFSVYNLpadmfgngsGTNFFTIAYEKPWVRCPPYLVGM 497
Cdd:pfam01757 131 SALFVFYLLLPL----LLRLLRKLKKSLLLLLLLLLLLLFLLYILILL---------VGVPFTVLVLFIFLYLPFFLLGA 197
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   498 LTGYLLaVYGNRKIRLNWVLSLAGWIIAVVIAGFCLFATYDYDKGSHWSVFTRGTFYnfhrlgWGMFICWVVAANHMGWG 577
Cdd:pfam01757 198 LLARYR-KRIRSKRLKLLIIILLALALLALILLLLFLFGLDPLALEFYGYPSLLLLL------LGILLLLLLALLLANLR 270
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 17551522   578 GpidkfmSHPIWQPFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYTSIPATFLSYIFA 642
Cdd:pfam01757 271 S------LRRLLSYLGKYSFGIYLIHPPILLLLGKLLGLLGLPLLPILLFLLLLVLTLLVSVLLA 329
NRF pfam20146
Nose resistant-to-fluoxetine protein, N-terminal domain;
38-166 5.43e-11

Nose resistant-to-fluoxetine protein, N-terminal domain;


Pssm-ID: 466307  Cd Length: 118  Bit Score: 60.22  E-value: 5.43e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522    38 CLNDTQTWIKSLELFagvseaclkkqtcslkelkilkaNLYAIQELDSFGKLPvPGMLEVATLYDGSYQECKRV-----S 112
Cdd:pfam20146   1 CRNDLELYLEGLRNG-----------------------ELWALKMLDASGKIP-SGLLSGNLYWLGSYDECLNInaptlS 56
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 17551522   113 GVKYNTNYCYLMLKPGKNASCSASGSSSAYS--------MLPMRLAVCLPDSCNQHEIIDIF 166
Cdd:pfam20146  57 GSSFRGQYCTAEFPPLPPPYLLLNSSELSLLisdalfllSLTLRLGLCLPSSCSAEDVENLL 118
 
Name Accession Description Interval E-value
NRF smart00703
N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to ...
76-183 2.65e-31

N-terminal domain in C. elegans NRF-6 (Nose Resistant to Fluoxetine-4) and NDG-4 (resistant to nordihydroguaiaretic acid-4); Also present in several other worm and fly proteins.


Pssm-ID: 214781  Cd Length: 110  Bit Score: 117.83  E-value: 2.65e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522     76 NLYAIQELDSFGKLPvPGMLEVATLYDGSYQECKRVSGV----KYNTNYCYLMLKPGKNASCSASGSSSaysMLPMRLAV 151
Cdd:smart00703   1 NLWALKQLDAWGKFP-SGLLEGNNLWLGSYEECLRISGPgtstKYQGKYCYLPLVPGKNLNCSIKSLTS---VLVLRTGV 76
                           90       100       110
                   ....*....|....*....|....*....|....
gi 17551522    152 CLPDSCNQHEIIDIFNQLSPY--PFTACHAYCSE 183
Cdd:smart00703  77 CLPSSCSAADLKTLLNQLSKDlnPFTVCEAFCSV 110
OafA COG1835
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains ...
253-656 6.27e-25

Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441440  Cd Length: 309  Bit Score: 105.88  E-value: 6.27e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 253 QKPGFIKSLDCIRLFSMCWVVTGHSFIYlvlsdtfmpvidFPKHFWNHLLLNAFVSVDTFFVLSGLVLTYMFFKTTPKKK 332
Cdd:COG1835   3 SSRRRLPSLDGLRGLAALLVVLYHAFLL------------FPPGPLGGLLSGGFLGVDVFFVLSGFLITRSLLRRLERGG 70
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 333 MivnpvTWIMFYVHRYLRLTPPIMLFIGFftvyapyiqgpfsasqmnqlvmeadeckttwwqnllyindfassnsmgcYG 412
Cdd:COG1835  71 F-----SLRRFYLRRFLRIYPAYLVVLLL-------------------------------------------------TG 96
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 413 PTWYLAVDTQLYLVAPIVLIGLYFSFAVGTGLIVAGCVGSIITTYILFsvynlpadmFGNGSGTNFFTiayekpwvrcPP 492
Cdd:COG1835  97 HLWSLSVELQFYLLFPLLLLLLRRLRRRLLALLALLALASLLLLALLL---------TGDPSAAYFLT----------LT 157
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 493 YLVGMLTGYLLAVYGNRKIRLNWVLSLAGwiIAVVIAGFCLFATYDYDKGSHWSVFTrgtfynfhrlgwGMFICWVVAan 572
Cdd:COG1835 158 RLWEFLLGALLALLYRRLRRLRRLLALAG--LALLLAALLLLDGAPFPGFGLLPLLA------------ALLVLAAAA-- 221
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 573 hmgWGGPIDKFMSHPIWQPFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYT--SIPATFLSYIFaffwsclFE 650
Cdd:COG1835 222 ---GSGLLSRLLSSRPLVFLGDISYSLYLWHWPVLVLLLALLGRLLGPAPLLLLLLALalSLALAALSYRL-------VE 291

                ....*.
gi 17551522 651 IPTLKL 656
Cdd:COG1835 292 RPARRL 297
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
258-642 1.05e-15

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 78.75  E-value: 1.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   258 IKSLDCIRLFSMCWVVTGHSFIYLVlsdtFMPVIDFPKHFWNHLLLNAFVSVDTFFVLSGLVLTYMFFKTTPkkkmivnp 337
Cdd:pfam01757   1 IAYLDLLRGIAILLVVIGHVLLAFG----YGGFGLPLELALLFLVFLGRFGVPLFFFISGYLLAALRRRRRS-------- 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   338 vtWIMFYVHRYLRLTPPIMLFIGFFTVYapyiqgpfsasqmnQLVMEADECKTTWWQNLLYINDFASSNsmGCYGPTWYL 417
Cdd:pfam01757  69 --LFKFIKKRLLRLLIPYLLWSLLYALL--------------LLLVAGLSVGGALLLLLLLNNGPLFFL--GVNGHLWFL 130
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   418 AVDTQLYLVAPIvligLYFSFAVGTGLIVAGCVGSIITTYILFSVYNLpadmfgngsGTNFFTIAYEKPWVRCPPYLVGM 497
Cdd:pfam01757 131 SALFVFYLLLPL----LLRLLRKLKKSLLLLLLLLLLLLFLLYILILL---------VGVPFTVLVLFIFLYLPFFLLGA 197
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522   498 LTGYLLaVYGNRKIRLNWVLSLAGWIIAVVIAGFCLFATYDYDKGSHWSVFTRGTFYnfhrlgWGMFICWVVAANHMGWG 577
Cdd:pfam01757 198 LLARYR-KRIRSKRLKLLIIILLALALLALILLLLFLFGLDPLALEFYGYPSLLLLL------LGILLLLLLALLLANLR 270
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 17551522   578 GpidkfmSHPIWQPFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYTSIPATFLSYIFA 642
Cdd:pfam01757 271 S------LRRLLSYLGKYSFGIYLIHPPILLLLGKLLGLLGLPLLPILLFLLLLVLTLLVSVLLA 329
NRF pfam20146
Nose resistant-to-fluoxetine protein, N-terminal domain;
38-166 5.43e-11

Nose resistant-to-fluoxetine protein, N-terminal domain;


Pssm-ID: 466307  Cd Length: 118  Bit Score: 60.22  E-value: 5.43e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522    38 CLNDTQTWIKSLELFagvseaclkkqtcslkelkilkaNLYAIQELDSFGKLPvPGMLEVATLYDGSYQECKRV-----S 112
Cdd:pfam20146   1 CRNDLELYLEGLRNG-----------------------ELWALKMLDASGKIP-SGLLSGNLYWLGSYDECLNInaptlS 56
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 17551522   113 GVKYNTNYCYLMLKPGKNASCSASGSSSAYS--------MLPMRLAVCLPDSCNQHEIIDIF 166
Cdd:pfam20146  57 GSSFRGQYCTAEFPPLPPPYLLLNSSELSLLisdalfllSLTLRLGLCLPSSCSAEDVENLL 118
WecH COG3274
Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];
251-646 1.61e-09

Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442505 [Multi-domain]  Cd Length: 345  Bit Score: 60.00  E-value: 1.61e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 251 KEQKPGFIKSLDCIRLFSMCWVVTGHSFIYLVLSDTFMPVIDFpkhFWNHLLLNAF-VSVDTFFVLSGLVLTYmffkttp 329
Cdd:COG3274   2 PSSKKKRIVYLDLLRVLAIFAVVLIHVTAPFVSSPGLIGSLNW---WVANLLDSLSrFAVPLFFMISGALLLD------- 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 330 kkkmiVNPVTWIMFYVHRYLRLTPPIMLFIGFFTVYAPYIQGPFSASQMNqlvmeadeckttWWQNLLYINDfassnsmg 409
Cdd:COG3274  72 -----RKKEDLKDFYKKRLRRILIPLLFWSLIYLLFFTFLGGFSFNSLSE------------FLKNLLTGGV-------- 126
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 410 cYGPTWYLAVDTQLYLVAPIVLIglyFSFAVGTGLIVAGCVGSIITTYILFSVynlpadmfgngsgTNFFTIAYEKPWVR 489
Cdd:COG3274 127 -SYHLWFLYMIIGLYLFTPLLRK---LVRKASKRELLYFLLLWLILSLLLPYL-------------NTLLGIDLFFTLTL 189
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 490 CPPYLVGMLTGYLLAVYGnrkirlNWVLSLAGWIIAVVIAGFCLFATYDYdKGSHWSVFTRGTFYNFHRLG-----WGMF 564
Cdd:COG3274 190 FLGYLGYFLLGYYLARYK------ARLKKRRLIALLLFLVGLALTFLGTY-LLSLQTGKFNELFYSYLSPNvvlmsVALF 262
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17551522 565 IcwvVAANHMGWGGPIDKFMSHpiwqpFGRLSYCAYIVHWVVLFWFLNVGGHATHYYSALEVFTYTSIpATFLSYIFAFF 644
Cdd:COG3274 263 L---LLKNLSFRSSKLSRLLSR-----LSKYSFGIYLIHPLVLDLLTKLGLNLLNINPLLGIPLVALL-TFVLSLLIVLL 333

                ..
gi 17551522 645 WS 646
Cdd:COG3274 334 LR 335
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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