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Conserved domains on  [gi|18406746|ref|NP_564757|]
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actin-related protein C3 [Arabidopsis thaliana]

Protein Classification

actin-related protein 2/3 complex subunit 3( domain architecture ID 10513356)

actin-related protein 2/3 complex subunit 3 is a component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
P21-Arc pfam04062
ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is ...
 2-170 1.55e-96

ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is involved in actin assembly and function.


:

Pssm-ID: 461152  Cd Length: 174  Bit Score: 276.69  E-value: 1.55e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746     2 VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDIKSPADKLLIYLTFYINVALK 81
Cdd:pfam04062   3 AYHSSFNDDTNVRLVGNMALLPLKTKFRGPAPPLDNEDYDIIDEALDLFRANVFFRNFEIKGPADRVLIYLTLFISECLK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746    82 RLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLPQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWL 161
Cdd:pfam04062  83 KLQKCTSKNEAQKELYTLALDNFAIPGDAGFPLNSLYAKPASRAEADLLRQYLTQLRQELGLRLLERVYDADGKPSKWWL 162


                  ....*....
gi 18406746   162 AFAKRKFMN 170
Cdd:pfam04062 163 CFAKRKFMN 171
 
Name Accession Description Interval E-value
P21-Arc pfam04062
ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is ...
 2-170 1.55e-96

ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is involved in actin assembly and function.


Pssm-ID: 461152  Cd Length: 174  Bit Score: 276.69  E-value: 1.55e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746     2 VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDIKSPADKLLIYLTFYINVALK 81
Cdd:pfam04062   3 AYHSSFNDDTNVRLVGNMALLPLKTKFRGPAPPLDNEDYDIIDEALDLFRANVFFRNFEIKGPADRVLIYLTLFISECLK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746    82 RLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLPQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWL 161
Cdd:pfam04062  83 KLQKCTSKNEAQKELYTLALDNFAIPGDAGFPLNSLYAKPASRAEADLLRQYLTQLRQELGLRLLERVYDADGKPSKWWL 162


                  ....*....
gi 18406746   162 AFAKRKFMN 170
Cdd:pfam04062 163 CFAKRKFMN 171
 
Name Accession Description Interval E-value
P21-Arc pfam04062
ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is ...
 2-170 1.55e-96

ARP2/3 complex ARPC3 (21 kDa) subunit; The seven component ARP2/3 actin-organizing complex is involved in actin assembly and function.


Pssm-ID: 461152  Cd Length: 174  Bit Score: 276.69  E-value: 1.55e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746     2 VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDIKSPADKLLIYLTFYINVALK 81
Cdd:pfam04062   3 AYHSSFNDDTNVRLVGNMALLPLKTKFRGPAPPLDNEDYDIIDEALDLFRANVFFRNFEIKGPADRVLIYLTLFISECLK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18406746    82 RLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLPQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWL 161
Cdd:pfam04062  83 KLQKCTSKNEAQKELYTLALDNFAIPGDAGFPLNSLYAKPASRAEADLLRQYLTQLRQELGLRLLERVYDADGKPSKWWL 162


                  ....*....
gi 18406746   162 AFAKRKFMN 170
Cdd:pfam04062 163 CFAKRKFMN 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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