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Conserved domains on  [gi|18411497|ref|NP_565155|]
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keratinocyte-associated-like protein [Arabidopsis thaliana]

Protein Classification

Keratin_assoc domain-containing protein( domain architecture ID 10561099)

Keratin_assoc domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Keratin_assoc pfam09775
Keratinocyte-associated protein 2; Members of this family comprise various ...
 6-121 7.42e-40

Keratinocyte-associated protein 2; Members of this family comprise various keratinocyte-associated proteins. Their exact function has not, as yet, been determined.


:

Pssm-ID: 401649  Cd Length: 129  Bit Score: 129.35  E-value: 7.42e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411497     6 GTSMLGSLIVFTVILSLQEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFqESSGIKSGWGAVILAEI-----IALI 80
Cdd:pfam09775   4 GTSFLLSSLLSVLLFAGMQMYKSWLASSQLLTILGGFLGSLLFVLLLTAVGNL-ETLLFGKGFQAKLFPEVlfclvIALF 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 18411497    81 AAGTVHRVCITTCFLFSAGLLYEVNKISGYMLS------KTESKSKR 121
Cdd:pfam09775  83 ASGLVHRVCITTCFLFSLVALYYINKISQKVYStsapvvTVPSKKKK 129
 
Name Accession Description Interval E-value
Keratin_assoc pfam09775
Keratinocyte-associated protein 2; Members of this family comprise various ...
 6-121 7.42e-40

Keratinocyte-associated protein 2; Members of this family comprise various keratinocyte-associated proteins. Their exact function has not, as yet, been determined.


Pssm-ID: 401649  Cd Length: 129  Bit Score: 129.35  E-value: 7.42e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411497     6 GTSMLGSLIVFTVILSLQEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFqESSGIKSGWGAVILAEI-----IALI 80
Cdd:pfam09775   4 GTSFLLSSLLSVLLFAGMQMYKSWLASSQLLTILGGFLGSLLFVLLLTAVGNL-ETLLFGKGFQAKLFPEVlfclvIALF 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 18411497    81 AAGTVHRVCITTCFLFSAGLLYEVNKISGYMLS------KTESKSKR 121
Cdd:pfam09775  83 ASGLVHRVCITTCFLFSLVALYYINKISQKVYStsapvvTVPSKKKK 129
 
Name Accession Description Interval E-value
Keratin_assoc pfam09775
Keratinocyte-associated protein 2; Members of this family comprise various ...
 6-121 7.42e-40

Keratinocyte-associated protein 2; Members of this family comprise various keratinocyte-associated proteins. Their exact function has not, as yet, been determined.


Pssm-ID: 401649  Cd Length: 129  Bit Score: 129.35  E-value: 7.42e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411497     6 GTSMLGSLIVFTVILSLQEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFqESSGIKSGWGAVILAEI-----IALI 80
Cdd:pfam09775   4 GTSFLLSSLLSVLLFAGMQMYKSWLASSQLLTILGGFLGSLLFVLLLTAVGNL-ETLLFGKGFQAKLFPEVlfclvIALF 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 18411497    81 AAGTVHRVCITTCFLFSAGLLYEVNKISGYMLS------KTESKSKR 121
Cdd:pfam09775  83 ASGLVHRVCITTCFLFSLVALYYINKISQKVYStsapvvTVPSKKKK 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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