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Conserved domains on  [gi|18400335|ref|NP_565554|]
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SKU5 similar 16 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02835 super family cl31936
oxidoreductase
17-538 0e+00

oxidoreductase


The actual alignment was detected with superfamily member PLN02835:

Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 774.53  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   17 FSSVFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSW 96
Cdd:PLN02835  17 LSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSW 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   97 QDGVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHK 176
Cdd:PLN02835  97 QDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHK 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  177 ELQRRLDSSRALPPPDGLLINGASKGlVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIH 256
Cdd:PLN02835 177 TLQQRLDSGKVLPFPDGVLINGQTQS-TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVH 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  257 VGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARTIRLNLTANAARPN 336
Cdd:PLN02835 256 VGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPN 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  337 PQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKTIMNIPTPGPSILGTSVFDV 416
Cdd:PLN02835 336 PQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQT 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  417 ALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRS 496
Cdd:PLN02835 416 SLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRS 495
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
gi 18400335  497 QIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCGKA--KHP 538
Cdd:PLN02835 496 AIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAigRHP 539
 
Name Accession Description Interval E-value
PLN02835 PLN02835
oxidoreductase
17-538 0e+00

oxidoreductase


Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 774.53  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   17 FSSVFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSW 96
Cdd:PLN02835  17 LSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSW 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   97 QDGVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHK 176
Cdd:PLN02835  97 QDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHK 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  177 ELQRRLDSSRALPPPDGLLINGASKGlVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIH 256
Cdd:PLN02835 177 TLQQRLDSGKVLPFPDGVLINGQTQS-TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVH 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  257 VGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARTIRLNLTANAARPN 336
Cdd:PLN02835 256 VGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPN 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  337 PQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKTIMNIPTPGPSILGTSVFDV 416
Cdd:PLN02835 336 PQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQT 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  417 ALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRS 496
Cdd:PLN02835 416 SLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRS 495
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
gi 18400335  497 QIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCGKA--KHP 538
Cdd:PLN02835 496 AIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAigRHP 539
ascorbase TIGR03388
L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing ...
32-505 1.02e-71

L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.


Pssm-ID: 274555 [Multi-domain]  Cd Length: 541  Bit Score: 238.50  E-value: 1.02e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335    32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKL-DEPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:TIGR03388   4 YKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLhTEGVVIHWHGIRQIGTPWADGTAGvTQCAINP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   110 KSSWTYHFQLkDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYpKPDADFTLLVSDWYKMGHKELQRRLDSS--RA 187
Cdd:TIGR03388  84 GETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKpmRW 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   188 LPPPDGLLING------------ASKGL--------------VFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVE 241
Cdd:TIGR03388 162 IGEPQSLLINGrgqfncslaakfSSTNLpqcnlkgneqcapqILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEAD 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   242 GSHTLQEVYESLDIHVGQSVTVLVTL-KAPVKDYFIVASTRFTKPILTT-TGILSYQGS--KIRPSHPLPIGPTYH-IHW 316
Cdd:TIGR03388 242 GNYVEPFTVKDIDIYSGETYSVLLTTdQDPSRNYWISVGVRGRKPNTPPgLTVLNYYPNspSRLPPTPPPVTPAWDdFDR 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   317 SMKQARTIrlnlTANAARPNPQGSFHygtipinRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFK 396
Cdd:TIGR03388 322 SKAFSLAI----KAAMGSPKPPETSD-------RRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQK 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   397 T----------IMNIPTPGPSILGTSVFDVALHEYVEFVFQN------NEGSIQSWHLDGTSAYVVGYGSGTWNMA-KRR 459
Cdd:TIGR03388 391 PppenyprdydIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNantlngNNSETHPWHLHGHDFWVLGYGEGKFRPGvDEK 470
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*.
gi 18400335   460 GYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLG 505
Cdd:TIGR03388 471 SYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMG 516
CuRO_2_AAO_like_1 cd13872
The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate ...
161-295 7.01e-63

The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate oxidase; The proteins in this subfamily are expressed in plant pollen. They share homology to ascorbate oxidase and other members of the blue copper oxidase family. The expression of the protein is detected during germination and pollen tube growth. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It is a member of the multicopper oxidase (MCO) family that couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259940 [Multi-domain]  Cd Length: 141  Bit Score: 202.25  E-value: 7.01e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 161 ADFTLLVSDWYKMGHKELQRRLDSSRALPPPDGLLING------ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:cd13872   1 DEYTVLIGDWYKTDHKTLRQSLDKGRTLGRPDGILINGkgpygyGANETSFTVEPGKTYRLRISNVGLRTSLNFRIQGHK 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18400335 235 MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSY 295
Cdd:cd13872  81 MLLVETEGSYTAQNTYDSLDVHVGQSYSVLVTADQSPKDYYIVASSRFLSPELTGVAILHY 141
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
162-298 6.18e-47

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 160.56  E-value: 6.18e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   162 DFTLLVSDWYKMGHKELQRRLDSSRALPP-----PDGLLINGASKGL--VFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:pfam00394   2 DYVITLSDWYHKDAKDLEKELLASGKAPTdfppvPDAVLINGKDGASlaTLTVTPGKTYRLRIINVALDDSLNFSIEGHK 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18400335   235 MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPIL-TTTGILSYQGS 298
Cdd:pfam00394  82 MTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQDPGNYWIVASPNIPAFDNgTAAAILRYSGA 146
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
25-334 5.69e-18

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 86.14  E-value: 5.69e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  25 AEDPYLFFTWTVTYGTRSPL-GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIkqrKMSW-QDGVLG 102
Cdd:COG2132   9 ESGGGREYELTAQPATVELLpGKPTTVWGYNGQYPGPTIRVREGDRVRVRVTNRLPEPTTVHWHGL---RVPNaMDGVPG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 103 TncPIQPKSSWTYHFQLKDQIGTYAY----FASTSMHRASGAFGALnvnqrsVIFVP---YPKPDADFTLLVSDWYKMGH 175
Cdd:COG2132  86 D--PIAPGETFTYEFPVPQPAGTYWYhphtHGSTAEQVYRGLAGAL------IVEDPeedLPRYDRDIPLVLQDWRLDDD 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 176 KELQRRLDSSRALPPPDGLLINGASkGLVFTGQHGKIYRFRISNVGISTSINFRIQ-GHMMTLVEVEGsHTLQEVYE--S 252
Cdd:COG2132 158 GQLLYPMDAAMGGRLGDTLLVNGRP-NPTLEVRPGERVRLRLLNASNARIYRLALSdGRPFTVIATDG-GLLPAPVEvdE 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 253 LDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPiLTTTGILSYQGSKIRPSHPLPIGPTYHIHwSMKQARTIRLNLTANA 332
Cdd:COG2132 236 LLLAPGERADVLVDFSADPGEEVTLANPFEGRS-GRALLTLRVTGAAASAPLPANLAPLPDLE-DREAVRTRELVLTGGM 313

                ..
gi 18400335 333 AR 334
Cdd:COG2132 314 AG 315
 
Name Accession Description Interval E-value
PLN02835 PLN02835
oxidoreductase
17-538 0e+00

oxidoreductase


Pssm-ID: 178429 [Multi-domain]  Cd Length: 539  Bit Score: 774.53  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   17 FSSVFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSW 96
Cdd:PLN02835  17 LSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSW 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   97 QDGVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHK 176
Cdd:PLN02835  97 QDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHK 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  177 ELQRRLDSSRALPPPDGLLINGASKGlVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIH 256
Cdd:PLN02835 177 TLQQRLDSGKVLPFPDGVLINGQTQS-TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVH 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  257 VGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARTIRLNLTANAARPN 336
Cdd:PLN02835 256 VGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPN 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  337 PQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKTIMNIPTPGPSILGTSVFDV 416
Cdd:PLN02835 336 PQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQT 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  417 ALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRS 496
Cdd:PLN02835 416 SLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRS 495
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
gi 18400335  497 QIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCGKA--KHP 538
Cdd:PLN02835 496 AIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAigRHP 539
PLN02354 PLN02354
copper ion binding / oxidoreductase
19-536 0e+00

copper ion binding / oxidoreductase


Pssm-ID: 177987 [Multi-domain]  Cd Length: 552  Bit Score: 687.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   19 SVFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQD 98
Cdd:PLN02354  17 VALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQD 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   99 GVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHKEL 178
Cdd:PLN02354  97 GVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTAL 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  179 QRRLDSSRALPPPDGLLINGASKGL------VFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYES 252
Cdd:PLN02354 177 KKFLDSGRTLGRPDGVLINGKSGKGdgkdepLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDS 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  253 LDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIhWSMKQARTIRLNLTANA 332
Cdd:PLN02354 257 LDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPVGWA-WSLNQFRSFRWNLTASA 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  333 ARPNPQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIP-GVFNFKTIMNIPTP--GPSIL 409
Cdd:PLN02354 336 ARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVAdKVFKYDTIKDNPPAkiTKIKI 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  410 GTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNK 489
Cdd:PLN02354 416 QPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNA 495
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*..
gi 18400335  490 GMWNLRSQIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCGKAK 536
Cdd:PLN02354 496 GMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVK 542
PLN02991 PLN02991
oxidoreductase
25-535 0e+00

oxidoreductase


Pssm-ID: 215536 [Multi-domain]  Cd Length: 543  Bit Score: 596.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   25 AEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLGTN 104
Cdd:PLN02991  24 AEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTT 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  105 CPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHKELQRRLDS 184
Cdd:PLN02991 104 CPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDN 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  185 SRALPPPDGLLINGASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVL 264
Cdd:PLN02991 184 GGKLPLPDGILINGRGSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVL 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  265 VTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTyHIHWSMKQARTIRLNLTANAARPNPQGSFHYG 344
Cdd:PLN02991 264 ITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI-QLSWSFDQARAIKTNLTASGPRPNPQGSYHYG 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  345 TIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKTIMNIPTPGPSILGTSVFDVALHEYVEF 424
Cdd:PLN02991 343 KINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEI 422
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  425 VFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYL 504
Cdd:PLN02991 423 VFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYL 502
                        490       500       510
                 ....*....|....*....|....*....|.
gi 18400335  505 GQELYVRVWNNEKSLYTESEPPVNVLFCGKA 535
Cdd:PLN02991 503 GQQFYMRVYTTSTSLRDEYLIPKNALLCGRA 533
PLN02792 PLN02792
oxidoreductase
18-537 0e+00

oxidoreductase


Pssm-ID: 178389 [Multi-domain]  Cd Length: 536  Bit Score: 580.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   18 SSVFVINAEDPYlFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQ 97
Cdd:PLN02792   6 TIISFVKADDTL-FYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQ 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   98 DGVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHKE 177
Cdd:PLN02792  85 DGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTT 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  178 LQRRLDSSRALPP-PDGLLINGASKGLVF--TGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLD 254
Cdd:PLN02792 165 LKKILDGGRKLPLmPDGVMINGQGVSYVYsiTVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLD 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  255 IHVGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARTIRLNLTANAAR 334
Cdd:PLN02792 245 IHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKIIHARQPDPDDLEWSIKQAQSIRTNLTASGPR 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  335 PNPQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKTIMNIPTPGPSI-LGTSV 413
Cdd:PLN02792 325 TNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMrLDTSV 404
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  414 FDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWN 493
Cdd:PLN02792 405 MGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWN 484
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....
gi 18400335  494 LRSQIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCGKAKH 537
Cdd:PLN02792 485 LRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASN 528
PLN02168 PLN02168
copper ion binding / pectinesterase
17-534 0e+00

copper ion binding / pectinesterase


Pssm-ID: 215113 [Multi-domain]  Cd Length: 545  Bit Score: 573.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   17 FSSVFVINA----EDPYLF-----FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWN 87
Cdd:PLN02168   5 FVEVFVLISlvilELSYAFapivsYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWN 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   88 GIKQRKMSWQDGVLGTNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPDADFTLLV 167
Cdd:PLN02168  85 GLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILI 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  168 SDWYKMGHKELQRRLDSSRALPPPDGLLING-ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTL 246
Cdd:PLN02168 165 GDWFYADHTVMRASLDNGHSLPNPDGILFNGrGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQ 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  247 QEVYESLDIHVGQSVTVLVTLKA-PV---KDYFIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIH-WSMKQA 321
Cdd:PLN02168 245 KRVYSSLDIHVGQSYSVLVTAKTdPVgiyRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLAPALHDYfSSVEQA 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  322 RTIRLNLTANAARPNPQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFN-----IPGVFNfk 396
Cdd:PLN02168 325 LSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQlndtiIPGMFP-- 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  397 timNIPTPGPSILGTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYP 476
Cdd:PLN02168 403 ---VYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYP 479
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18400335  477 MSWTSILVSLDNKGMWNLRSQIWSRRYLGQELYVRV----WNNEKSLYTESEPPV--NVLFCGK 534
Cdd:PLN02168 480 YSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVkgegEEDPSTIPVRDENPIpgNVIRCGK 543
PLN00044 PLN00044
multi-copper oxidase-related protein; Provisional
25-533 7.01e-171

multi-copper oxidase-related protein; Provisional


Pssm-ID: 165622 [Multi-domain]  Cd Length: 596  Bit Score: 496.49  E-value: 7.01e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   25 AEDPYLFFTWTVTYGTRSPLG--VPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLG 102
Cdd:PLN00044  23 AGDPYAYYDWEVSYVSAAPLGgvKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  103 TNCPIQPKSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKPD-ADFTLLVSDWYKMGHKELQRR 181
Cdd:PLN00044 103 TNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDgGDITLFIADWYARDHRALRRA 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  182 LDSSRALPPPDGLLING----------ASKGLVF---TGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQE 248
Cdd:PLN00044 183 LDAGDLLGAPDGVLINAfgpyqyndslVPPGITYeriNVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQ 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  249 VYESLDIHVGQSVTVLVTL-KAPVKDYFIVASTRFTKPI----LTTTGILSYQGSKIRPSHPLPIGPT--YHIHWSMKQA 321
Cdd:PLN00044 263 NYTNLDIHVGQSYSFLLTMdQNASTDYYVVASARFVDAAvvdkLTGVAILHYSNSQGPASGPLPDAPDdqYDTAFSINQA 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  322 RTIRLNLTANAARPNPQGSFHYGTIPINRTFVL-ANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFKtIMN 400
Cdd:PLN00044 343 RSIRWNVTASGARPNPQGSFHYGDITVTDVYLLqSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLD-FPN 421
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  401 IPTPGPSILGTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWT 480
Cdd:PLN00044 422 HPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWT 501
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 18400335  481 SILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWNNEKSLYTESEP-PVNVLFCG 533
Cdd:PLN00044 502 AILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPiPDNAIFCG 555
ascorbase TIGR03388
L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing ...
32-505 1.02e-71

L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.


Pssm-ID: 274555 [Multi-domain]  Cd Length: 541  Bit Score: 238.50  E-value: 1.02e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335    32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKL-DEPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:TIGR03388   4 YKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLhTEGVVIHWHGIRQIGTPWADGTAGvTQCAINP 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   110 KSSWTYHFQLkDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYpKPDADFTLLVSDWYKMGHKELQRRLDSS--RA 187
Cdd:TIGR03388  84 GETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKpmRW 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   188 LPPPDGLLING------------ASKGL--------------VFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVE 241
Cdd:TIGR03388 162 IGEPQSLLINGrgqfncslaakfSSTNLpqcnlkgneqcapqILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEAD 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   242 GSHTLQEVYESLDIHVGQSVTVLVTL-KAPVKDYFIVASTRFTKPILTT-TGILSYQGS--KIRPSHPLPIGPTYH-IHW 316
Cdd:TIGR03388 242 GNYVEPFTVKDIDIYSGETYSVLLTTdQDPSRNYWISVGVRGRKPNTPPgLTVLNYYPNspSRLPPTPPPVTPAWDdFDR 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   317 SMKQARTIrlnlTANAARPNPQGSFHygtipinRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFNFK 396
Cdd:TIGR03388 322 SKAFSLAI----KAAMGSPKPPETSD-------RRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQK 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   397 T----------IMNIPTPGPSILGTSVFDVALHEYVEFVFQN------NEGSIQSWHLDGTSAYVVGYGSGTWNMA-KRR 459
Cdd:TIGR03388 391 PppenyprdydIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNantlngNNSETHPWHLHGHDFWVLGYGEGKFRPGvDEK 470
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*.
gi 18400335   460 GYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLG 505
Cdd:TIGR03388 471 SYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMG 516
PLN02191 PLN02191
L-ascorbate oxidase
32-505 1.93e-65

L-ascorbate oxidase


Pssm-ID: 177843 [Multi-domain]  Cd Length: 574  Bit Score: 222.97  E-value: 1.93e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLD-EPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:PLN02191  26 YTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTtEGLVIHWHGIRQKGSPWADGAAGvTQCAINP 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  110 KSSWTYHFQLkDQIGTYAYFASTSMHRASGAFGALNVN-----QRSVIFvpypkpDADFTLLVSDWY--KMGHKELQRRL 182
Cdd:PLN02191 106 GETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDvakgpKERLRY------DGEFNLLLSDWWheSIPSQELGLSS 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  183 DSSRALPPPDGLLING-----ASKGLVFTG----------------------QHGKIYRFRISNVGISTSINFRIQGHMM 235
Cdd:PLN02191 179 KPMRWIGEAQSILINGrgqfnCSLAAQFSNgtelpmctfkegdqcapqtlrvEPNKTYRIRLASTTALASLNLAVQGHKL 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  236 TLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKA-PVKDYFIVASTRFTKP----ILTTTGILSYQGSKIrPSHPLPIGP 310
Cdd:PLN02191 259 VVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQdPSQNYYISVGVRGRKPnttqALTILNYVTAPASKL-PSSPPPVTP 337
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  311 TYHihwSMKQARTIRLNLTANAARPNPQGSFHygtipinRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIP 390
Cdd:PLN02191 338 RWD---DFERSKNFSKKIFSAMGSPSPPKKYR-------KRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLK 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  391 GVFNFKT----------IMNiPTPGP-SILGTSVFDVALHEYVEFVFQNNE------GSIQSWHLDGTSAYVVGYGSGTW 453
Cdd:PLN02191 408 LGFNRKSpprsyrmdydIMN-PPPFPnTTTGNGIYVFPFNVTVDVIIQNANvlkgvvSEIHPWHLHGHDFWVLGYGDGKF 486
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|...
gi 18400335  454 NMA-KRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLG 505
Cdd:PLN02191 487 KPGiDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMG 539
CuRO_2_AAO_like_1 cd13872
The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate ...
161-295 7.01e-63

The second cupredoxin domain of plant pollen multicopper oxidase homologous to ascorbate oxidase; The proteins in this subfamily are expressed in plant pollen. They share homology to ascorbate oxidase and other members of the blue copper oxidase family. The expression of the protein is detected during germination and pollen tube growth. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It is a member of the multicopper oxidase (MCO) family that couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259940 [Multi-domain]  Cd Length: 141  Bit Score: 202.25  E-value: 7.01e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 161 ADFTLLVSDWYKMGHKELQRRLDSSRALPPPDGLLING------ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:cd13872   1 DEYTVLIGDWYKTDHKTLRQSLDKGRTLGRPDGILINGkgpygyGANETSFTVEPGKTYRLRISNVGLRTSLNFRIQGHK 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18400335 235 MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPILTTTGILSY 295
Cdd:cd13872  81 MLLVETEGSYTAQNTYDSLDVHVGQSYSVLVTADQSPKDYYIVASSRFLSPELTGVAILHY 141
CuRO_1_AAO_like_1 cd13846
The first cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of ...
30-147 2.19e-62

The first cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of plant pollen multicopper oxidase homologous to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. This subfamily does not harbor trinuclear copper binding histidines.


Pssm-ID: 259915 [Multi-domain]  Cd Length: 118  Bit Score: 200.33  E-value: 2.19e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  30 LFFTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLGTNCPIQP 109
Cdd:cd13846   1 SFFDWNVSYITASPLGVPQQVIAINGQFPGPTINVTTNDNVVVNVFNSLDEPLLLTWNGIQQRRNSWQDGVLGTNCPIPP 80
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 18400335 110 KSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVN 147
Cdd:cd13846  81 GWNWTYKFQVKDQIGSFFYFPSLHFQRAAGGFGGIRVN 118
PLN02604 PLN02604
oxidoreductase
15-537 7.00e-62

oxidoreductase


Pssm-ID: 215324 [Multi-domain]  Cd Length: 566  Bit Score: 213.18  E-value: 7.00e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   15 YCFSSVFVINAEDPYLFFTWTVTYGTRSPLGVPQQVILINGQFPGPPI---EGVTNNNIVVNVInkLDEPFLITWNGIKQ 91
Cdd:PLN02604  10 LLFSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTIlaqQGDTVIVELKNSL--LTENVAIHWHGIRQ 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   92 RKMSWQDGVLG-TNCPIQPKSSWTYHFQLkDQIGTYAYFASTSMHRASGAFGALNVNQRSVIFVPYPKpDADFTLLVSDW 170
Cdd:PLN02604  88 IGTPWFDGTEGvTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSY-DYDRSIILTDW 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  171 YkmgHKELQRRLDSSRALP-----PPDGLLING---------ASKGL---------------VFTGQHGKIYRFRISNVG 221
Cdd:PLN02604 166 Y---HKSTYEQALGLSSIPfdwvgEPQSLLIQGkgryncslvSSPYLkagvcnatnpecspyVLTVVPGKTYRLRISSLT 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  222 ISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTL-KAPVKDYFI---VASTRFTKPilTTTGILSYQg 297
Cdd:PLN02604 243 ALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKAdQDPSRNYWVttsVVSRNNTTP--PGLAIFNYY- 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  298 skirPSHPL---PIGPTYHIHWSMKQARtirlnLTANAARPNPQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSY 374
Cdd:PLN02604 320 ----PNHPRrspPTVPPSGPLWNDVEPR-----LNQSLAIKARHGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSF 390
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  375 VNPATPLKLADWFNIPGVF---------NFKT--IMNIPTPGPSILGTSVFDVALHEYVEFVFQN------NEGSIQSWH 437
Cdd:PLN02604 391 NLPHTPYLIALKENLTGAFdqtpppegyDFANydIYAKPNNSNATSSDSIYRLQFNSTVDIILQNantmnaNNSETHPWH 470
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  438 LDGTSAYVVGYGSGTWNMAKR-RGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLGQELYVrvwnnE 516
Cdd:PLN02604 471 LHGHDFWVLGYGEGKFNMSSDpKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVF-----E 545
                        570       580
                 ....*....|....*....|.
gi 18400335  517 KSLYTESEPPVNVLFCGKAKH 537
Cdd:PLN02604 546 EGIERVGKLPSSIMGCGESKG 566
CuRO_3_AAO_like_1 cd13894
The third cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of ...
376-497 6.84e-53

The third cupredoxin domain of plant Ascorbate oxidase homologs; This subfamily is composed of plant pollen multicopper oxidase homologous to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. This subfamily does not harbor T1 copper or trinuclear copper binding sites.


Pssm-ID: 259961 [Multi-domain]  Cd Length: 123  Bit Score: 175.70  E-value: 6.84e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 376 NPATPLKLADWFNIPGVFNFKTIMNIPTPGPSILGTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNM 455
Cdd:cd13894   1 NPDTPLKLADYFKIKGVFQLDSIPDPPTRKTPYLGTSVINGTYRGFIEIVFQNNEDTVQSWHLDGYSFFVVGMGFGDWTP 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 18400335 456 AKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQ 497
Cdd:cd13894  81 EKRKSYNLLDAVSRSTTQVYPGSWTAILLELDNVGMWNVRSQ 122
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
32-492 8.14e-49

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 176.85  E-value: 8.14e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335    32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDG-VLGTNCPIQPK 110
Cdd:TIGR03389   6 YTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGpAYITQCPIQPG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   111 SSWTYHFQLKDQIGTYAYFASTSMHRASgAFGALNVNQRSVIFVPYPKPDADFTLLVSDWYKMGHKELQRRLDSSRALPP 190
Cdd:TIGR03389  86 QSYVYNFTITGQRGTLWWHAHISWLRAT-VYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPN 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   191 -PDGLLING---------ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQS 260
Cdd:TIGR03389 165 vSDAYTINGhpgplyncsSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQT 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   261 VTVLVTLKAPVKDYFIVASTRFTKPI----LTTTGILSYQGSKIRPSHPLPIGPTYhihwsmkqartirlNLTANAARPN 336
Cdd:TIGR03389 245 TNVLLTADQSPGRYFMAARPYMDAPGafdnTTTTAILQYKGTSNSAKPILPTLPAY--------------NDTAAATNFS 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   337 PQ----GSFHY-GTIP--INRTFVLANGRAM----------ING-KLRYTVNRVSYVNPATPLKLADWFNIPGV------ 392
Cdd:TIGR03389 311 NKlrslNSAQYpANVPvtIDRRLFFTIGLGLdpcpnntcqgPNGtRFAASMNNISFVMPTTALLQAHYFGISGVfttdfp 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   393 ------FNFkTIMNIPTPGPSILGTSVFDVALHEYVEFVFQNNE---GSIQSWHLDGTSAYVVGYGSGTWNMAKR-RGYN 462
Cdd:TIGR03389 391 anpptkFNY-TGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSilgSENHPIHLHGYNFFVVGTGFGNFDPKKDpAKFN 469
                         490       500       510
                  ....*....|....*....|....*....|
gi 18400335   463 LVDAVSRHTFQVYPMSWTSILVSLDNKGMW 492
Cdd:TIGR03389 470 LVDPPERNTVGVPTGGWAAIRFVADNPGVW 499
Cu-oxidase pfam00394
Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of ...
162-298 6.18e-47

Multicopper oxidase; Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.


Pssm-ID: 395317 [Multi-domain]  Cd Length: 146  Bit Score: 160.56  E-value: 6.18e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   162 DFTLLVSDWYKMGHKELQRRLDSSRALPP-----PDGLLINGASKGL--VFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:pfam00394   2 DYVITLSDWYHKDAKDLEKELLASGKAPTdfppvPDAVLINGKDGASlaTLTVTPGKTYRLRIINVALDDSLNFSIEGHK 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18400335   235 MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPIL-TTTGILSYQGS 298
Cdd:pfam00394  82 MTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQDPGNYWIVASPNIPAFDNgTAAAILRYSGA 146
Cu-oxidase_3 pfam07732
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
35-150 7.58e-39

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462247 [Multi-domain]  Cd Length: 119  Bit Score: 137.76  E-value: 7.58e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335    35 TVTYGTRSPLG-VPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLG-TNCPIQPKSS 112
Cdd:pfam07732   1 TVTYGTVSPLGgTRQAVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTSIHWHGLQQRGTPWMDGVPGvTQCPIPPGQS 80
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 18400335   113 WTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVNQRS 150
Cdd:pfam07732  81 FTYRFQVKQQAGTYWYHSHTSGQQAAGLAGAIIIEDRA 118
Cu-oxidase_2 pfam07731
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
379-518 6.25e-32

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462246 [Multi-domain]  Cd Length: 138  Bit Score: 119.85  E-value: 6.25e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   379 TPLKLADWFNI-PGVFNFKTIMNIPTPGPsiLGTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWNMAK 457
Cdd:pfam07731   2 TPPKLPTLLQItSGNFRRNDWAINGLLFP--PNTNVITLPYGTVVEWVLQNTTTGVHPFHLHGHSFQVLGRGGGPWPEED 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18400335   458 RRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWsrRYLGQELYVRVWNNEKS 518
Cdd:pfam07731  80 PKTYNLVDPVRRDTVQVPPGGWVAIRFRADNPGVWLFHCHIL--WHLDQGMMGQFVVRPGD 138
CuRO_1_Diphenol_Ox cd13857
The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
32-147 1.03e-26

The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259926 [Multi-domain]  Cd Length: 119  Bit Score: 104.65  E-value: 1.03e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLG-TNCPIQPK 110
Cdd:cd13857   3 YNFTISEITGAPDGFVRPMLVINGQFPGPLIEANQGDRIVVHVTNELDEPTSIHWHGLFQNGTNWMDGTAGiTQCPIPPG 82
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 18400335 111 SSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVN 147
Cdd:cd13857  83 GSFTYNFTVDGQYGTYWYHSHYSTQYADGLVGPLIVH 119
CuRO_1_LCC_like cd04206
Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
32-147 3.32e-26

Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 1, 3, and 5 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259869 [Multi-domain]  Cd Length: 120  Bit Score: 103.13  E-value: 3.32e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLD-EPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:cd04206   3 YELTITETTVNPDGVLRQVITVNGQFPGPTIRVKEGDTVEVTVTNNLPnEPTSIHWHGLRQPGTNDGDGVAGlTQCPIPP 82
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 18400335 110 KSSWTYHFQLKDQIGTYAYFASTSMHRASGAFGALNVN 147
Cdd:cd04206  83 GESFTYRFTVDDQAGTFWYHSHVGGQRADGLYGPLIVE 120
CuRO_2_LCC_like cd04205
Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
164-295 1.55e-24

Cupredoxin domain 2 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259868 [Multi-domain]  Cd Length: 152  Bit Score: 99.74  E-value: 1.55e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 164 TLLVSDWYKMGHKELQRRLD--SSRALPPPDGLLINGASKGL-------------VFTGQHGKIYRFRISNVGISTSINF 228
Cdd:cd04205   2 VLLLSDWYHDSAEDVLAGYMpnSFGNEPVPDSLLINGRGRFNcsmavcnsgcplpVITVEPGKTYRLRLINAGSFASFNF 81
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18400335 229 RIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFT----KPILTTTGILSY 295
Cdd:cd04205  82 AIDGHNMTVIEVDGGYVEPLEVDNLDLAPGQRYDVLVKADQPPGNYWIRASADGRtfdeGGNPNGTAILRY 152
CuRO_2_Fet3p_like cd13877
The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
162-295 1.09e-19

The second Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) with the four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the extracellular space and the carboxyl terminus in the cytoplasm. The periplasmic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259945 [Multi-domain]  Cd Length: 148  Bit Score: 85.68  E-value: 1.09e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 162 DFTLLVSDWYKMGHKELQRRLDSSR----ALPPPDGLLINGaSKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTL 237
Cdd:cd13877   2 EVTLTLSDWYHDQSPDLLRDFLSPYnptgAEPIPDSSLFND-TQNATINFEPGKTYLLRIINMGAFASQYFHIEGHDMTI 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18400335 238 VEVEGSHTLQEVYESLDIHVGQSVTVLVTLKA-PVKDYFIVAS----TRFTKP---ILTTTGILSY 295
Cdd:cd13877  81 IEVDGVYVKPYPVDTLYIAVGQRYSVLVKAKNdTDRNYAIINGmdkdMLDTVPddlYLNKTNWLVY 146
CuRO_1_AAO cd13845
The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
32-147 1.44e-19

The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259914 [Multi-domain]  Cd Length: 120  Bit Score: 84.42  E-value: 1.44e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKL-DEPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:cd13845   3 YKWKVEYMFWAPDCVEKLVIGINGQFPGPTIRATAGDTIVVELENKLpTEGVAIHWHGIRQRGTPWADGTASvSQCPINP 82
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 18400335 110 KSSWTYHFqLKDQIGTYAYFASTSMHRASGAFGALNVN 147
Cdd:cd13845  83 GETFTYQF-VVDRPGTYFYHGHYGMQRSAGLYGSLIVD 119
ascorbOXfungal TIGR03390
L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, ...
46-507 2.70e-19

L-ascorbate oxidase, fungal type; This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.


Pssm-ID: 132431 [Multi-domain]  Cd Length: 538  Bit Score: 91.06  E-value: 2.70e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335    46 VPQQVILINGQFPGPPI---EGVTNNNIVVNVINklDEPFLITWNGIKQRKMSWQDGV-LGTNCPIQPKSSWTYHFQLK- 120
Cdd:TIGR03390  25 SSRYSVVVNGTSPGPEIrlqEGQTTWIRVYNDIP--DNNVTMHWHGLTQRTAPFSDGTpLASQWPIPPGHFFDYEIKPEp 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   121 DQIGTYAYFASTSMhRASGAFGALNVnqRSVIFVPYpKPDADFTLLVSDWYKMGHKELQRRLDSSRALPP--PDGLLING 198
Cdd:TIGR03390 103 GDAGSYFYHSHVGF-QAVTAFGPLIV--EDCEPPPY-KYDDERILLVSDFFSATDEEIEQGLLSTPFTWSgeTEAVLLNG 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   199 ASKGLVFTGQH---------------GKIYRFR-ISNVGISTsINFRIQGH-MMTLVEVEGSHTLQEVYESLDIHVGQSV 261
Cdd:TIGR03390 179 KSGNKSFYAQInpsgscmlpvidvepGKTYRLRfIGATALSL-ISLGIEDHeNLTIIEADGSYTKPAKIDHLQLGGGQRY 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   262 TVLVTLKAPV-------KDYFIVASTRFTKPILTTTGILSYQGSK------IRPSHPLPIgPTYHIHWSMKQARTirLNL 328
Cdd:TIGR03390 258 SVLFKAKTEDelcggdkRQYFIQFETRDRPKVYRGYAVLRYRSDKasklpsVPETPPLPL-PNSTYDWLEYELEP--LSE 334
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   329 TANAARPNPQGSFHYGTIPINRTFVLANGRamingkLRYTVNRVSYVN--PATPLkLADwfnipgVFNFKTIMnIPTPGP 406
Cdd:TIGR03390 335 ENNQDFPTLDEVTRRVVIDAHQNVDPLNGR------VAWLQNGLSWTEsvRQTPY-LVD------IYENGLPA-TPNYTA 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335   407 SILG------TSVFDVALHEYVEFVFQNNEGS--------IQSWHLDGTSAYVVGYGSGTW----NMAKRRGYNlvdAVS 468
Cdd:TIGR03390 401 ALANygfdpeTRAFPAKVGEVLEIVWQNTGSYtgpnggvdTHPFHAHGRHFYDIGGGDGEYnataNEAKLENYT---PVL 477
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*....
gi 18400335   469 RHTFQVY----------PMSWTSILVSLDNKGMWNLRSQIWSRRYLGQE 507
Cdd:TIGR03390 478 RDTTMLYryavkvvpgaPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQ 526
CuRO_1_Abr2_like cd13850
The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
32-144 5.46e-19

The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259919 [Multi-domain]  Cd Length: 117  Bit Score: 82.73  E-value: 5.46e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGVLG-TNCPIQPK 110
Cdd:cd13850   1 FTLTVTEGSPDGDGGEREVILINGQFPGPPIILDEGDEVEILVTNNLPVNTTIHFHGILQRGTPWSDGVPGvTQWPIQPG 80
                        90       100       110
                ....*....|....*....|....*....|....
gi 18400335 111 SSWTYHFQLKDQIGTYAYFASTSMHRASGAFGAL 144
Cdd:cd13850  81 GSFTYRWKAEDQYGLYWYHSHYRGYYMDGLYGPI 114
CuRO_1_MaLCC_like cd13854
The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
32-147 8.54e-19

The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259923 [Multi-domain]  Cd Length: 122  Bit Score: 82.29  E-value: 8.54e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKL-DEPFLITWNGIKQRKMSWQDGVLG-TNCPIQP 109
Cdd:cd13854   6 YTLTITNSTLAPDGVEKEVMLINGQYPGPLIEANWGDTIEVTVINKLqDNGTSIHWHGIRQLNTNWQDGVPGvTECPIAP 85
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 18400335 110 KSSWTYHFQLkDQIGTYAYFASTSMHRASGAFGALNVN 147
Cdd:cd13854  86 GDTRTYRFRA-TQYGTSWYHSHYSAQYGDGVVGPIVIH 122
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
25-334 5.69e-18

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 86.14  E-value: 5.69e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  25 AEDPYLFFTWTVTYGTRSPL-GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIkqrKMSW-QDGVLG 102
Cdd:COG2132   9 ESGGGREYELTAQPATVELLpGKPTTVWGYNGQYPGPTIRVREGDRVRVRVTNRLPEPTTVHWHGL---RVPNaMDGVPG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 103 TncPIQPKSSWTYHFQLKDQIGTYAY----FASTSMHRASGAFGALnvnqrsVIFVP---YPKPDADFTLLVSDWYKMGH 175
Cdd:COG2132  86 D--PIAPGETFTYEFPVPQPAGTYWYhphtHGSTAEQVYRGLAGAL------IVEDPeedLPRYDRDIPLVLQDWRLDDD 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 176 KELQRRLDSSRALPPPDGLLINGASkGLVFTGQHGKIYRFRISNVGISTSINFRIQ-GHMMTLVEVEGsHTLQEVYE--S 252
Cdd:COG2132 158 GQLLYPMDAAMGGRLGDTLLVNGRP-NPTLEVRPGERVRLRLLNASNARIYRLALSdGRPFTVIATDG-GLLPAPVEvdE 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 253 LDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPiLTTTGILSYQGSKIRPSHPLPIGPTYHIHwSMKQARTIRLNLTANA 332
Cdd:COG2132 236 LLLAPGERADVLVDFSADPGEEVTLANPFEGRS-GRALLTLRVTGAAASAPLPANLAPLPDLE-DREAVRTRELVLTGGM 313

                ..
gi 18400335 333 AR 334
Cdd:COG2132 314 AG 315
CuRO_3_AAO cd13893
The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
349-509 9.94e-18

The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259960 [Multi-domain]  Cd Length: 155  Bit Score: 80.16  E-value: 9.94e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 349 NRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLAdwfniPGVFNFKtimniptpgpsilGTSVFDValheyvefVFQN 428
Cdd:cd13893   2 TRTLLLLNTQNLINGQLRWAINNVSYVPPPTPYLAA-----LPVYPFK-------------GGDVVDV--------ILQN 55
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 429 ------NEGSIQSWHLDGTSAYVVGYGSGTWNMAKR-RGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSR 501
Cdd:cd13893  56 antntrNASEQHPWHLHGHDFWVLGYGLGGFDPAADpSSLNLVNPPMRNTVTIFPYGWTALRFKADNPGVWAFHCHIEWH 135

                ....*...
gi 18400335 502 RYLGQELY 509
Cdd:cd13893 136 FHMGMGVV 143
CuRO_2_Tv-LCC_like cd13882
The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; ...
165-297 1.13e-16

The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259949 [Multi-domain]  Cd Length: 159  Bit Score: 77.45  E-value: 1.13e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 165 LLVSDWYKMGHKELQRrlDSSRALPPPDGLLINGasKG----------LVFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:cd13882   3 ITLGDWYHTAAPDLLA--TTAGVPPVPDSGTING--KGrfdggptsplAVINVKRGKRYRFRVINISCIPSFTFSIDGHN 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18400335 235 MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPI----LTTTGILSYQG 297
Cdd:cd13882  79 LTVIEADGVETKPLTVDSVQIYAGQRYSVVVEANQPVDNYWIRAPPTGGTPAnnggQLNRAILRYKG 145
CuRO_1_Tv-LCC_like cd13856
The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; ...
32-128 1.40e-16

The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259925 [Multi-domain]  Cd Length: 125  Bit Score: 76.22  E-value: 1.40e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFL-----ITWNGIKQRKMSWQDGVLG-TNC 105
Cdd:cd13856   3 YTLNIVNTRLAPDGFERSAVLANGQFPGPLITANKGDTFRITVVNQLTDPTMrrstsIHWHGIFQHGTNYADGPAFvTQC 82
                        90       100
                ....*....|....*....|...
gi 18400335 106 PIQPKSSWTYHFQLKDQIGTYAY 128
Cdd:cd13856  83 PIAPNHSFTYDFTAGDQAGTFWY 105
CuRO_1_tcLCC2_insect_like cd13858
The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; ...
45-146 1.58e-16

The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) family includes the majority of insect laccases. One member of the family is laccase 2 from Tribolium castaneum. Laccase 2 is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259927 [Multi-domain]  Cd Length: 105  Bit Score: 75.27  E-value: 1.58e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  45 GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLD-EPFLITWNGIKQRKMSWQDGVLG-TNCPIQPKSSWTYHFQlKDQ 122
Cdd:cd13858   2 GVERPVITVNGQLPGPSIEVCEGDTVVVDVKNRLPgESTTIHWHGIHQRGTPYMDGVPMvTQCPILPGQTFRYKFK-ADP 80
                        90       100
                ....*....|....*....|....
gi 18400335 123 IGTYAYFASTSMHRASGAFGALNV 146
Cdd:cd13858  81 AGTHWYHSHSGTQRADGLFGALIV 104
CuRO_2_AAO cd13871
The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
160-295 3.66e-16

The second cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. MCOs couple oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259939 [Multi-domain]  Cd Length: 166  Bit Score: 76.04  E-value: 3.66e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 160 DADFTLLVSDWYkmgHKELQRRLDSSRALP-----PPDGLLING-----------ASKGL---------------VFTGQ 208
Cdd:cd13871   1 DGELNILLSDWW---HKSIYEQETGLSSKPfrwvgEPQSLLIEGrgryncslapaYPSSLpspvcnksnpqcapfILHVS 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 209 HGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGsHTLQEVY-ESLDIHVGQSVTVLVTL-KAPVKDYFIVASTRFTKPI 286
Cdd:cd13871  78 PGKTYRLRIASVTALSSLNFIIEGHNLTVVEADG-NYVQPFEvSNLDIYSGETYSVLVTAdQDPSRNYWVSVNVRGRRPN 156
                       170
                ....*....|
gi 18400335 287 LTT-TGILSY 295
Cdd:cd13871 157 TPPgLAILNY 166
CuRO_1_Fet3p cd13851
The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
32-128 5.18e-15

The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) and a four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the exocellular space and the carboxyl terminus in the cytoplasm. The periplamic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259920 [Multi-domain]  Cd Length: 121  Bit Score: 71.53  E-value: 5.18e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGV-PQQVILINGQFPGPPIEGVTNNNIVVNVINKL-DEPFLITWNGIKQRKMSWQDGVLG-TNCPIQ 108
Cdd:cd13851   3 FDWNITWVTANPDGLfERRVIGINGQWPPPPIEVNKGDTVVIHATNSLgDQPTSLHFHGLFQNGTNYMDGPVGvTQCPIP 82
                        90       100
                ....*....|....*....|
gi 18400335 109 PKSSWTYHFQLKDQIGTYAY 128
Cdd:cd13851  83 PGQSFTYEFTVDTQVGTYWY 102
CuRO_2_LCC_plant cd13875
The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that ...
163-295 7.54e-15

The second cupredoxin domain of the plant laccases; Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259943 [Multi-domain]  Cd Length: 148  Bit Score: 71.86  E-value: 7.54e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 163 FTLLVSDWYKMGHKELQRRLDSSRALPP-PDGLLING---------ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQG 232
Cdd:cd13875   1 VPIILGEWWNRDVNDVEDQALLTGGGPNiSDAYTINGqpgdlyncsSKDTFVLTVEPGKTYLLRIINAALNEELFFKIAN 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 18400335 233 HMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVASTRFTKPIL-----TTTGILSY 295
Cdd:cd13875  81 HTLTVVAVDASYTKPFTTDYILIAPGQTTDVLLTADQPPGRYYMAARPYQSAPPVpfdntTATAILEY 148
CuRO_2_MCO_like_1 cd13886
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
163-295 3.85e-14

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This family of MCOs is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259953 [Multi-domain]  Cd Length: 163  Bit Score: 70.38  E-value: 3.85e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 163 FTLLVSDWYKMGHKELQRRL---DSSRALPPPDGLLING----------------ASKG--LVFTGQHGKIYRFRISNVG 221
Cdd:cd13886   1 VVVMVNDYYHDPSSVLLARYlapGNEGDEPVPDNGLINGigqfdcasatykiyccASNGtyYNFTLEPNKTYRLRLINAG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 222 ISTSINFRIQGHMMTLVEVEGshTLQEVYE--SLDIHVGQSVTVLVTLKAPVKDYFIVAST------RFTKPILTTT--G 291
Cdd:cd13886  81 SFADFTFSVDGHPLTVIEADG--TLVEPVEvhSITISVAQRYSVILTTNQPTGGNFWMRAElntdcfTYDNPNLDPDvrA 158

                ....
gi 18400335 292 ILSY 295
Cdd:cd13886 159 IVSY 162
CuRO_2_tcLCC_insect_like cd13884
The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium ...
162-295 7.43e-13

The second cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) subfamily includes the majority of insect laccases. One member is laccase 2 from Tribolium castaneum, which is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259951 [Multi-domain]  Cd Length: 150  Bit Score: 66.10  E-value: 7.43e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 162 DFTLLVSDWYKMGHKELQRRLDSSRALPPPDGLLINGasKG---------------LVFTGQHGKIYRFRISNVGIST-S 225
Cdd:cd13884   1 EHVILIQDWTHELSSERFVGRGHNGGGQPPDSILING--KGryydpktgntnntplEVFTVEQGKRYRFRLINAGATNcP 78
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18400335 226 INFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFIVAST----RFTKpiLTTTGILSY 295
Cdd:cd13884  79 FRVSIDGHTLTVIASDGNDVEPVEVDSIIIYPGERYDFVLNANQPIGNYWIRARGledcDNRR--LQQLAILRY 150
CuRO_2_MaLCC_like cd13880
The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
164-298 1.03e-12

The second cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259947 [Multi-domain]  Cd Length: 167  Bit Score: 66.12  E-value: 1.03e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 164 TLLVSDWYKMGHKELQRRLDSSRALPPPDGLLING-------ASKGL--VFTGQHGKIYRFRISNVGISTSINFRIQGHM 234
Cdd:cd13880   3 PVLLTDWYHRSAFELFSEELPTGGPPPMDNILINGkgkfpcsTGAGSyfETTFTPGKKYRLRLINTGVDTTFRFSIDGHN 82
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18400335 235 MT-----LVEVEGSHTlqevyESLDIHVGQSVTVLVTLKA-PVKDYFIVA-----STRFTKPILTTTGILSYQGS 298
Cdd:cd13880  83 LTviaadFVPIVPYTT-----DSLNIGIGQRYDVIVEANQdPVGNYWIRAepatgCSGTNNNPDNRTGILRYDGA 152
CuRO_1_LCC_plant cd13849
The first cupredoxin domain of plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
32-141 1.82e-12

The first cupredoxin domain of plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259918 [Multi-domain]  Cd Length: 117  Bit Score: 64.20  E-value: 1.82e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYGTRSPLGVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKMSWQDGV-LGTNCPIQPK 110
Cdd:cd13849   1 YTFVVQEKNVTRLCSTKSILTVNGQFPGPTIRVHEGDTVVVNVTNRSPYNITIHWHGIRQLRSGWADGPaYITQCPIQPG 80
                        90       100       110
                ....*....|....*....|....*....|...
gi 18400335 111 SSWTYHFQLKDQIGTYAYFASTSMHRAS--GAF 141
Cdd:cd13849  81 QSYTYRFTVTGQEGTLWWHAHISWLRATvyGAF 113
CuRO_3_LCC_like cd04207
Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
376-492 4.79e-12

Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 2, 4, and 6 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259870 [Multi-domain]  Cd Length: 132  Bit Score: 63.25  E-value: 4.79e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 376 NPATPLKLADWFNIPGVFNFKtiMNIPTPGPSILGTSVFDVALHEYVEFVFQNNEGS--IQSWHLDGTSAYVVGYGSGTW 453
Cdd:cd04207   1 DRTRRLVLSQTGAPDGTTRWV--INGMPFKEGDANTDIFSVEAGDVVEIVLINAGNHdmQHPFHLHGHSFWVLGSGGGPF 78
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 18400335 454 NmakrRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMW 492
Cdd:cd04207  79 D----APLNLTNPPWRDTVLVPPGGWVVIRFKADNPGVW 113
CuRO_3_LCC_plant cd13897
The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
390-492 5.90e-12

The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259964 [Multi-domain]  Cd Length: 139  Bit Score: 63.43  E-value: 5.90e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 390 PGVFNFKTIMNIPTPGPSILGTSVFDVALHEYVEFVFQN-NEGSIQS--WHLDGTSAYVVGYGSGTWNMAKR-RGYNLVD 465
Cdd:cd13897  10 PPVPFDYTGNAPNENTPTSRGTKVKVLEYGSTVEIVLQGtSLLAAENhpMHLHGFDFYVVGRGFGNFDPSTDpATFNLVD 89
                        90       100
                ....*....|....*....|....*..
gi 18400335 466 AVSRHTFQVYPMSWTSILVSLDNKGMW 492
Cdd:cd13897  90 PPLRNTVGVPRGGWAAIRFVADNPGVW 116
CuRO_2_Abr2_like cd13876
The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
165-296 2.53e-11

The second cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259944 [Multi-domain]  Cd Length: 138  Bit Score: 61.45  E-value: 2.53e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 165 LLVSDWYKMGHKE-LQRRLDSSRALPPPDGLLINGasKG----LVFTGQHGKIYR-FRISNVGISTSINFRIQGHMMTLV 238
Cdd:cd13876   3 IILSDWRHLTSEEyWKIMRASGIEPFCYDSILING--KGrvycLIVIVDPGERWVsLNFINAGGFHTLAFSIDEHPMWVY 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 239 EVEGSHTL-QEVyESLDIHVGQSVTVLVTLKAPVKDYFI-VASTRFTKpILTTTGILSYQ 296
Cdd:cd13876  81 AVDGGYIEpQLV-DAISITNGERYSVLVKLDKPPGDYTIrVASTGAPQ-VISGYAILRYK 138
CuRO_2_Diphenol_Ox cd13883
The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
165-295 7.88e-09

The second cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259950 [Multi-domain]  Cd Length: 164  Bit Score: 55.04  E-value: 7.88e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 165 LLVSDWYKMGHKELQRRLDSSR------ALPPPDGLLING--------ASKG--------LVFTGQHGKIYRFRISNVGI 222
Cdd:cd13883   3 LFISDWYHDQSEVIVAGLLSPQgykgspAAPSPDSALINGigqfncsaADPGtcctqtspPEIQVEAGKRTRFRLINAGS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 223 STSINFRIQGHMMTLVE-----VEGSHTLQEVyeslDIHVGQSVTVLVTLKAP-VKDYFIVASTRFTKPI------LTTT 290
Cdd:cd13883  83 HAMFRFSVDNHTLNVVEaddtpVYGPTVVHRI----PIHNGQRYSVIIDTTSGkAGDSFWLRARMATDCFawdlqqQTGK 158

                ....*
gi 18400335 291 GILSY 295
Cdd:cd13883 159 AILRY 163
CuRO_1_CopA cd13848
The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
45-144 8.48e-09

The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259917 [Multi-domain]  Cd Length: 116  Bit Score: 53.44  E-value: 8.48e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  45 GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGI-KQRKMswqDGVLGTNCP-IQPKSSWTYHFQLKdQ 122
Cdd:cd13848  16 GKEGEAITVNGQVPGPLLRFKEGDDATIRVHNRLDEDTSIHWHGLlLPNDM---DGVPGLSFPgIKPGETFTYRFPVR-Q 91
                        90       100
                ....*....|....*....|..
gi 18400335 123 IGTYAYFASTSMHRASGAFGAL 144
Cdd:cd13848  92 SGTYWYHSHSGLQEQTGLYGPI 113
CuRO_2_AAO_like_2 cd13873
The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant ...
161-295 1.88e-07

The second cupredoxin domain of plant Ascorbate oxidase homologs; This family includes plant laccases similar to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couples oxidation of substrates with reduction of dioxygen to water. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259941 [Multi-domain]  Cd Length: 161  Bit Score: 50.75  E-value: 1.88e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 161 ADFTLLVSDWYKMGHKELQRRLDSS--RALPPPDGLLINGASKGLVFTG----------------QHGKIYRFR-ISNVG 221
Cdd:cd13873   1 EERILLFSDYFPKTDSTIETGLTATpfVWPGEPNALLVNGKSGGTCNKSategcttschppvidvEPGKTYRFRfIGATA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 222 ISTsINFRIQGHM-MTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLK--APVKD-----YFIVASTRFTKPILTTTGIL 293
Cdd:cd13873  81 LSF-VSLGIEGHDnLTIIEADGSYTKPAETDHLQLGSGQRYSFLLKTKslEELAAlnkttFWIQIETRWRPTNDTGYAVL 159

                ..
gi 18400335 294 SY 295
Cdd:cd13873 160 RY 161
CuRO_3_MCO_like_4 cd13910
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
369-492 5.09e-07

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259977 [Multi-domain]  Cd Length: 166  Bit Score: 49.60  E-value: 5.09e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 369 VNRVSY---VNPATPLKLADWFNIPGVFNfktIMNIPTPGPSILGTSVFDVAlhEYVEFVFQNNEGSIQSWHLDGTSAYV 445
Cdd:cd13910  20 FNGTSWrplPGPATLLLALDADNAEEVAA---GNGLSTFDGNQLVITVDDID--KVVDLVINNLDDGDHPFHLHGHKFWV 94
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 18400335 446 VG-----YGSGTWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMW 492
Cdd:cd13910  95 LGsgdgrYGGGGYTAPDGTSLNTTNPLRRDTVSVPGFGWAVLRFVADNPGLW 146
CuRO_1_2dMco_1 cd13860
The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily ...
54-128 3.96e-05

The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily includes bacterial two domain multicopper oxidases (2dMCOs) with similarity to McoN from Nitrosomonas europaea. 2dMCO is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259929 [Multi-domain]  Cd Length: 119  Bit Score: 42.95  E-value: 3.96e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18400335  54 NGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNG-IKQRKMswqDGVLG-TNCPIQPKSSWTYHFQLKdQIGTYAY 128
Cdd:cd13860  26 NGSVPGPTIEVTEGDRVRILVTNELPEPTTVHWHGlPVPNGM---DGVPGiTQPPIQPGETFTYEFTAK-QAGTYMY 98
CuRO_1_CumA_like cd13861
The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
45-146 6.57e-05

The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida, which is involved in the oxidation of Mn(II). However, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCO catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259930 [Multi-domain]  Cd Length: 119  Bit Score: 42.61  E-value: 6.57e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  45 GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQR-KMswqDGVLG-TNCPIQPKSSWTYHFQLKDQ 122
Cdd:cd13861  17 GPTTRTWGYNGQVPGPELRVRQGDTLRVRLTNRLPEPTTIHWHGLRLPnAM---DGVPGlTQPPVPPGESFTYEFTPPDA 93
                        90       100
                ....*....|....*....|....*.
gi 18400335 123 iGTYAY--FASTSMHRASGAFGALNV 146
Cdd:cd13861  94 -GTYWYhpHVGSQEQLDRGLYGPLIV 118
CuRO_D1_2dMcoN_like cd13859
The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
54-128 1.39e-04

The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Its biological function has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259928 [Multi-domain]  Cd Length: 122  Bit Score: 41.69  E-value: 1.39e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18400335  54 NGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRKmSWQ-DGVLG-TNCPIQPKSSWTYHFQlKDQIGTYAY 128
Cdd:cd13859  26 NGQVPGPLIHVKEGDDLVVHVTNNTTLPHTIHWHGVLQMG-SWKmDGVPGvTQPAIEPGESFTYKFK-AERPGTLWY 100
CuRO_1_McoC_like cd13855
The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
32-144 2.99e-04

The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacteria multicopper oxidases (MCOs) represented by McoC from pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic multicopper oxidase, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. They are capable of oxidizing a vast range of substrates, varying from aromatic compunds to inorganic compounds such as metals. Most MCOs have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259924 [Multi-domain]  Cd Length: 121  Bit Score: 40.54  E-value: 2.99e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  32 FTWTVTYG-TRSPL--GVPQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFLITWNGIKQRkmSWQDGvlGTNCPIQ 108
Cdd:cd13855   2 FRATLTAAeVRIRLlpGKPTEFWAYNGSVPGPLIEVFEGDTVEITFRNRLPEPTTVHWHGLPVP--PDQDG--NPHDPVA 77
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 18400335 109 PKSSWTYHFQL-KDQIGTYAYFASTSMHRASGAFGAL 144
Cdd:cd13855  78 PGNDRVYRFTLpQDSAGTYWYHPHPHGHTAEQVYRGL 114
CuRO_2_CopA_like_1 cd13870
The second cupredoxin domain of CopA copper resistance protein like family; The members of ...
193-267 5.09e-04

The second cupredoxin domain of CopA copper resistance protein like family; The members of this family are copper resistance protein (CopA) homologs. CopA is multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. CopA is involved in copper resistance in bacteria. CopA mutant causes a loss of function, including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259938 [Multi-domain]  Cd Length: 117  Bit Score: 40.01  E-value: 5.09e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18400335 193 GLLING--ASKGLVFTGQHGKIYRFRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTL 267
Cdd:cd13870  17 YYLINGrpPEDPAVFTARPGDRLRLRLINAAGDTAFRVALAGHRLTVTHTDGFPVEPVEVDALLIGMGERYDAIVTA 93
CuRO_1_AAO_like_2 cd13847
The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal ...
47-148 1.58e-03

The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal proteins with similarity to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259916 [Multi-domain]  Cd Length: 117  Bit Score: 38.66  E-value: 1.58e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335  47 PQQVILINGQFPGPPIEGVTNNNIVVNVINKLDEPFL-ITWNGIKQRKMSWQDGV-LGTNCPIQPKSSWTYHFQL-KDQI 123
Cdd:cd13847  14 PRPSTLINGSFPGPELRVQEGQHLWVRVYNDLEAGNTtMHFHGLSQYMSPFSDGTpLASQWPIPPGKFFDYEFPLeAGDA 93
                        90       100
                ....*....|....*....|....*
gi 18400335 124 GTYaYFASTSMHRASGAFGALNVNQ 148
Cdd:cd13847  94 GTY-YYHSHVGFQSVTAYGALIVED 117
CuRO_3_Diphenol_Ox cd13904
The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
351-492 1.97e-03

The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259971 [Multi-domain]  Cd Length: 158  Bit Score: 39.20  E-value: 1.97e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 351 TFVLANGRAMIngklRYTVNRVSYVN-PATPLkLADWFNIPGV-FNFKTIMN--IPTPGPSILGTSVFDVAL-HEYvefv 425
Cdd:cd13904  10 TFVDPNGNALG----RFFVNNVTWTNyIYQPL-LHQVASGGGGtLNSSEVASvtFPTDGWYDIVINNLDPAIdHPY---- 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 18400335 426 fqnnegsiqswHLDGTSAYVVGYGSG--TWNMAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMW 492
Cdd:cd13904  81 -----------HLHGVDFHIVARGSGtlTLEQLANVQYNTTNPLRRDTIVIPGGSWAVLRIPADNPGVW 138
CuRO_3_AAO_like_2 cd13895
The third cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal ...
411-492 9.73e-03

The third cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal proteins with similarity to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259962 [Multi-domain]  Cd Length: 188  Bit Score: 37.30  E-value: 9.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400335 411 TSVFDVALHEYVEFVFQNNEGSIQS-----WHLDGTSAYVVGYGSGTW------NMAKRRGYNlvdAVSRHTFQVY---- 475
Cdd:cd13895  65 TNTFPAKLGEVLDIVWQNTASPTGGldahpWHAHGAHYYDLGSGLGTYsatalaNEEKLRGYN---PIRRDTTMLYrygg 141
                        90       100
                ....*....|....*....|....*.
gi 18400335 476 ---------PMSWTSILVSLDNKGMW 492
Cdd:cd13895 142 kgyypppgtGSGWRAWRLRVDDPGVW 167
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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