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Conserved domains on  [gi|18400827|ref|NP_565595|]
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epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein [Arabidopsis thaliana]

Protein Classification

ANTH domain-containing protein( domain architecture ID 10541692)

ANTH (AP180 N-Terminal Homology) domain-containing protein may act as clathrin coat assembly protein; similar to Homo sapiens phosphatidylinositol-binding clathrin assembly protein and clathrin coat assembly protein AP180

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ANTH pfam07651
ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the ...
30-373 1.94e-82

ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.


:

Pssm-ID: 400137  Cd Length: 272  Bit Score: 261.08  E-value: 1.94e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827    30 DLEVAIVKATSHDDDPASEKYIREILNLTSlSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILY 109
Cdd:pfam07651   1 DLEVAVVKATSHDEAPPKEKHVREILVGTS-SSAKLAALFWALSRRLPLTRSWVVAFKALILVHKLLREGHPSVLQELLR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   110 STRRGTRMLNMSDFrdeahSSSWDHSAFVRTYAGYLDQRLElalferksgvsvnsggnssHHSNNddrygrgrddfrspp 189
Cdd:pfam07651  80 ARRRISSLLRISSF-----SLSWDYGAFIRAYAKYLDERLD-------------------FHRKL--------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   190 prsydyengggggsdfRGDNNGYGGVPKRSRSYGDmtemggggggggrdekKVVTPLREMTPERIFGKMGHLQRLLDRFL 269
Cdd:pfam07651 121 ----------------PRDPGTFERVEYGSLVAVG----------------DPNERYLTMSMEDLLDSIPKLQKLLFRLL 168
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   270 SLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGV 349
Cdd:pfam07651 169 KCRPTGNALSNECIIAALILLVKESFGLYRAINEGIINLLEKFFELSKPDADRALGIYKRFVKQFERLKEFYEVCKNLGY 248
                         330       340
                  ....*....|....*....|....
gi 18400827   350 ARSSEYPEVQRITSKLLETLEEFV 373
Cdd:pfam07651 249 FRSLEIPKLPHIPPNLLEALEEYL 272
 
Name Accession Description Interval E-value
ANTH pfam07651
ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the ...
30-373 1.94e-82

ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.


Pssm-ID: 400137  Cd Length: 272  Bit Score: 261.08  E-value: 1.94e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827    30 DLEVAIVKATSHDDDPASEKYIREILNLTSlSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILY 109
Cdd:pfam07651   1 DLEVAVVKATSHDEAPPKEKHVREILVGTS-SSAKLAALFWALSRRLPLTRSWVVAFKALILVHKLLREGHPSVLQELLR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   110 STRRGTRMLNMSDFrdeahSSSWDHSAFVRTYAGYLDQRLElalferksgvsvnsggnssHHSNNddrygrgrddfrspp 189
Cdd:pfam07651  80 ARRRISSLLRISSF-----SLSWDYGAFIRAYAKYLDERLD-------------------FHRKL--------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   190 prsydyengggggsdfRGDNNGYGGVPKRSRSYGDmtemggggggggrdekKVVTPLREMTPERIFGKMGHLQRLLDRFL 269
Cdd:pfam07651 121 ----------------PRDPGTFERVEYGSLVAVG----------------DPNERYLTMSMEDLLDSIPKLQKLLFRLL 168
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   270 SLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGV 349
Cdd:pfam07651 169 KCRPTGNALSNECIIAALILLVKESFGLYRAINEGIINLLEKFFELSKPDADRALGIYKRFVKQFERLKEFYEVCKNLGY 248
                         330       340
                  ....*....|....*....|....
gi 18400827   350 ARSSEYPEVQRITSKLLETLEEFV 373
Cdd:pfam07651 249 FRSLEIPKLPHIPPNLLEALEEYL 272
ANTH_N_AP180_plant cd16987
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of plant Clathrin coat assembly ...
31-152 1.05e-68

ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of plant Clathrin coat assembly protein AP180 and similar proteins; This subfamily is composed of plant clathrin coat assembly protein AP180 and other ANTH domain containing proteins that are yet to be characterized. Arabidopsis thaliana AP180 (At-AP180) is a binding partner of plant alphaC-adaptin; it functions as a clathrin assembly protein that promotes the formation of cages with an almost uniform size distribution. In addition to At-AP180, Arabidopsis thaliana contains many ANTH domain containing proteins labelled as putative clathrin assembly proteins included in this subfamily such as At4g02650, At5g10410, At2g25430, and At1g33340, among others. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains of plant clathrin coat assembly protein AP180 and similar proteins.


Pssm-ID: 340784  Cd Length: 122  Bit Score: 219.42  E-value: 1.05e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827  31 LEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYS 110
Cdd:cd16987   1 LEVAVVKATSHDDAPPDEKYVREILSLGSSSRAYASACVSALSRRLNRTRDWVVALKCLMLLHRLLRDGSPILEQELSLA 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 18400827 111 TRRGTRMLNMSDFRDEAHSSSWDHSAFVRTYAGYLDQRLELA 152
Cdd:cd16987  81 PSGGRNPLNLSDFRDGSSSKSWDFSAFVRAYAAYLDERLIFS 122
ENTH smart00273
Epsin N-terminal homology (ENTH) domain;
29-157 5.87e-41

Epsin N-terminal homology (ENTH) domain;


Pssm-ID: 214594  Cd Length: 127  Bit Score: 145.08  E-value: 5.87e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827     29 PDLEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPifqEEIL 108
Cdd:smart00273   1 SDLEVKVRKATNNDEWGPKGKHLREIIQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSP---RVIL 77
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 18400827    109 YSTRRGTRMLNMSDFRDEaHSSSWDHSAFVRTYAGYLDQRLELALFERK 157
Cdd:smart00273  78 EALRNRNRILNLSDFQDI-DSRGKDQGANIRTYAKYLLERLEDDRRLKE 125
 
Name Accession Description Interval E-value
ANTH pfam07651
ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the ...
30-373 1.94e-82

ANTH domain; AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.


Pssm-ID: 400137  Cd Length: 272  Bit Score: 261.08  E-value: 1.94e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827    30 DLEVAIVKATSHDDDPASEKYIREILNLTSlSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILY 109
Cdd:pfam07651   1 DLEVAVVKATSHDEAPPKEKHVREILVGTS-SSAKLAALFWALSRRLPLTRSWVVAFKALILVHKLLREGHPSVLQELLR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   110 STRRGTRMLNMSDFrdeahSSSWDHSAFVRTYAGYLDQRLElalferksgvsvnsggnssHHSNNddrygrgrddfrspp 189
Cdd:pfam07651  80 ARRRISSLLRISSF-----SLSWDYGAFIRAYAKYLDERLD-------------------FHRKL--------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   190 prsydyengggggsdfRGDNNGYGGVPKRSRSYGDmtemggggggggrdekKVVTPLREMTPERIFGKMGHLQRLLDRFL 269
Cdd:pfam07651 121 ----------------PRDPGTFERVEYGSLVAVG----------------DPNERYLTMSMEDLLDSIPKLQKLLFRLL 168
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827   270 SLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGV 349
Cdd:pfam07651 169 KCRPTGNALSNECIIAALILLVKESFGLYRAINEGIINLLEKFFELSKPDADRALGIYKRFVKQFERLKEFYEVCKNLGY 248
                         330       340
                  ....*....|....*....|....
gi 18400827   350 ARSSEYPEVQRITSKLLETLEEFV 373
Cdd:pfam07651 249 FRSLEIPKLPHIPPNLLEALEEYL 272
ANTH_N_AP180_plant cd16987
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of plant Clathrin coat assembly ...
31-152 1.05e-68

ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of plant Clathrin coat assembly protein AP180 and similar proteins; This subfamily is composed of plant clathrin coat assembly protein AP180 and other ANTH domain containing proteins that are yet to be characterized. Arabidopsis thaliana AP180 (At-AP180) is a binding partner of plant alphaC-adaptin; it functions as a clathrin assembly protein that promotes the formation of cages with an almost uniform size distribution. In addition to At-AP180, Arabidopsis thaliana contains many ANTH domain containing proteins labelled as putative clathrin assembly proteins included in this subfamily such as At4g02650, At5g10410, At2g25430, and At1g33340, among others. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains of plant clathrin coat assembly protein AP180 and similar proteins.


Pssm-ID: 340784  Cd Length: 122  Bit Score: 219.42  E-value: 1.05e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827  31 LEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYS 110
Cdd:cd16987   1 LEVAVVKATSHDDAPPDEKYVREILSLGSSSRAYASACVSALSRRLNRTRDWVVALKCLMLLHRLLRDGSPILEQELSLA 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 18400827 111 TRRGTRMLNMSDFRDEAHSSSWDHSAFVRTYAGYLDQRLELA 152
Cdd:cd16987  81 PSGGRNPLNLSDFRDGSSSKSWDFSAFVRAYAAYLDERLIFS 122
ENTH smart00273
Epsin N-terminal homology (ENTH) domain;
29-157 5.87e-41

Epsin N-terminal homology (ENTH) domain;


Pssm-ID: 214594  Cd Length: 127  Bit Score: 145.08  E-value: 5.87e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827     29 PDLEVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPifqEEIL 108
Cdd:smart00273   1 SDLEVKVRKATNNDEWGPKGKHLREIIQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSP---RVIL 77
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 18400827    109 YSTRRGTRMLNMSDFRDEaHSSSWDHSAFVRTYAGYLDQRLELALFERK 157
Cdd:smart00273  78 EALRNRNRILNLSDFQDI-DSRGKDQGANIRTYAKYLLERLEDDRRLKE 125
ANTH_N cd03564
ANTH (AP180 N-Terminal Homology) domain family, N-terminal region; The ANTH (AP180 N-Terminal ...
31-150 9.85e-41

ANTH (AP180 N-Terminal Homology) domain family, N-terminal region; The ANTH (AP180 N-Terminal Homology) domain family is composed of Adaptor Protein 180 (AP180), Clathrin Assembly Lymphoid Myeloid Leukemia protein (CALM), and similar proteins. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the Trans-Golgi Network, which suggests that the ANTH domain is a universal component of the machinery for clathrin-mediated membrane budding. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains.


Pssm-ID: 340767  Cd Length: 120  Bit Score: 144.34  E-value: 9.85e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827  31 LEVAIVKATSHDDDPASEKYIREILNLTSLSRGY--ILACVTSVSRRLSKtRDWVVALKALMLVHRLLNEGDPIFQEEIL 108
Cdd:cd03564   1 LDVAVVKATNHDEVPPKEKHVRKLLLATSNGGGRadVAYIVHALAKRLHK-KNWIVVLKTLIVIHRLLREGSPSFLEELL 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 18400827 109 ystRRGTRMLNMSDFRDEAHSSSWDHSAFVRTYAGYLDQRLE 150
Cdd:cd03564  80 ---RYSGHIFNLSNFKDDSSPEAWDLSAFIRRYARYLEERLE 118
ANTH_N_YAP180 cd16988
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of yeast clathrin coat assembly ...
32-148 2.12e-10

ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of yeast clathrin coat assembly protein AP180 (YAP180) and similar proteins; This subfamily includes yeast clathrin coat assembly protein AP180 (YAP180) and similar proteins. There are two YAP180 proteins in Saccharomyces cerevisiae, AP180A (yAP180A or YAP1801) and AP180B (yAP180B or YAP1802). They are involved in endocytosis and clathrin cage assembly. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains of plant clathrin coat assembly protein AP180 and similar proteins.


Pssm-ID: 340785  Cd Length: 117  Bit Score: 58.35  E-value: 2.12e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827  32 EVAIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRLSKTrDWVVALKALMLVHRLLNEGDPifQEEILYST 111
Cdd:cd16988   2 EKLVKGATKIKLAPPKAKYLDPILLATYSSDASFGEIVRALSRRLRDN-SWTVVFKSLIVLHLMIREGET--DDVLLYYL 78
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 18400827 112 RRGtRMLNMSDFRDEAHSSSwDHSAFVRTYAGYLDQR 148
Cdd:cd16988  79 SRP-DFLDLRKIRNGSSAGS-GQLQNIQRYAAYLKER 113
ANTH_N_AP180 cd16985
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of adaptor protein 180 (AP180) ...
34-149 4.09e-09

ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of adaptor protein 180 (AP180) subfamily; The Adaptor Protein 180 (AP180) subfamily members are phosphatidylinositol-binding clathrin assembly proteins, including mammalian clathrin coat assembly protein AP180 and Clathrin Assembly Lymphoid Myeloid Leukemia protein (CALM), Drosophila LAP (also called Like-AP180 or AP180), and Caenorhabditis elegans Uncoordinated protein 11 (unc-11, also called AP180-like adaptor protein). They are components of the adaptor complexes which link clathrin to receptors in coated vesicles. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180, also called 91 kDa synaptosomal-associated protein (SNAP91) or phosphoprotein F1-20, is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. CALM, also called phosphatidylinositol binding clathrin assembly protein (PICALM), is ubiquitously expressed. Members of this subfamily contain ANTH domains, which bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. This model describes the N-terminal region of ANTH domains of the Adaptor Protein 180 (AP180) subfamily.


Pssm-ID: 340782  Cd Length: 117  Bit Score: 54.74  E-value: 4.09e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18400827  34 AIVKATSHDDDPASEKYIREILNLTSLSRGYILACVTSVSRRlSKTRDWVVALKALMLVHRLLNEGDPIFqeeILYSTRR 113
Cdd:cd16985   4 AVCKATTHEVMGPKKKHLDYLVQCTNEPNVNIPQLADLLFER-TQNSSWVVVFKALITTHHLMVYGNERF---IQYLASR 79
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 18400827 114 GTRMlNMSDFRDEAHSSSWDHSAFVRTYAGYLDQRL 149
Cdd:cd16985  80 NSLF-NLSNFLDKSGSQGYDMSTFIRRYAKYLNEKA 114
ANTH_N_Sla2p_HIP1_like cd16986
ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of Sla2p/HIP1/HIP1R subfamily; ...
31-101 1.91e-07

ANTH (AP180 N-Terminal Homology) domain, N-terminal region, of Sla2p/HIP1/HIP1R subfamily; Members of the Sla2p/HIP1/HIP1R subfamily share a common domain architecture, containing an N-terminal ANTH, a central clathrin-binding colied-coil, and a C-terminal actin-binding talin-like (also called I/LWEQ) domains. HIP1 was identified in 1997 as an interactor of huntingtin; when mutated, it is involved in the neurodegenerative disorder Huntington's disease. Both HIP1 and HIP1R promote clathrin assembly in vitro. Yeast Sla2p, is a regulator of membrane cytoskeleton assembly. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. The ANTH domain is a unique module whose N-terminal half is structurally similar to the Epsin N-Terminal Homology (ENTH) and Vps27/Hrs/STAM (VHS) domains, containing a superhelix of eight alpha helices. In addition, it contains a coiled-coil C-terminal half with strutural similarity to spectrin repeats. It binds phosphoinositide PtdIns(4,5)P2 at a short conserved motif K[X]9[K/R][H/Y] between helices 1 and 2. While the ANTH domain of Sla2p preferentially binds PtdIns(4,5)P2, which is considered to be an interaction hub in the clathrin interactome, mammalian HIP1 and HIP1R were found to preferentially bind PtdIns(3,4)P2 and PtdIns(3,5)P2, respectively. This model describes the N-terminal region of ANTH domains of the Sla2p/HIP1/HIP1R subfamily.


Pssm-ID: 340783  Cd Length: 117  Bit Score: 50.07  E-value: 1.91e-07
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18400827  31 LEVAIVKATSHDDDPASEKYIREILnLTSLSRGYILACVTSVSRRLSKTrDWVVALKALMLVHRLLNEGDP 101
Cdd:cd16986   1 FEKAVNKATNKTDSPPKPKHVRTII-VKSWTHQKGPQFYEELSKRLLLN-NPVVQFKALVTLHKVLRDGPP 69
ENTH_like_Tepsin cd03572
Epsin N-Terminal Homology (ENTH)-like domain of AP-4 complex accessory subunit Tepsin and ...
37-107 3.05e-03

Epsin N-Terminal Homology (ENTH)-like domain of AP-4 complex accessory subunit Tepsin and similar domains; This family is composed of proteins containing an ENTH-like domain including vertebrate AP-4 complex accessory subunit Tepsin and Arabidopsis thaliana VHS domain-containing protein At3g16270. Tepsin is also called ENTH Domain-containing protein 2 (ENTHD2), Epsin for AP-4, or Tetra-epsin. It associates with the adapter-like complex 4 (AP-4), a heterotetramer composed of two large adaptins (epsilon and beta), a medium adaptin (mu) and a small adaptin (sigma), which forms a non-clathrin coat on vesicles departing the Trans-Golgi Network. The Epsin N-Terminal Homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. ENTH domain is highly similar to the N-terminal region of the AP180 N-Terminal Homology (ANTH_N) domain. ENTH and ANTH_N domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. ENTH domains bind both, inositol phospholipids with preference for PtdIns(4,5)P2, and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. ENTH and ANTH (E/ANTH)-containing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the Trans-Golgi Network, which suggests that E/ANTH domains are universal components of the machinery for clathrin-mediated membrane budding.


Pssm-ID: 340773  Cd Length: 119  Bit Score: 37.92  E-value: 3.05e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18400827  37 KATSHDDDPASeKYI-REILNLTSLSRGYILACVTSVSRRLSKTrDWVVALKALMLVHRLLNEGDPIFQEEI 107
Cdd:cd03572   7 KATSDDDEPTP-GYLlEEIAKLTRSSPGSCQELLDYLLKRLKKS-SPHVKLKALRIIKHLCQKGSPEFRREL 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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