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Conserved domains on  [gi|18407057|ref|NP_566071|]
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Auxin-responsive GH3 family protein [Arabidopsis thaliana]

Protein Classification

GH3 auxin-responsive promoter family protein( domain architecture ID 12043298)

GH3 auxin-responsive promoter family protein such as Arabidopsis thaliana jasmonic acid-amido synthetase JAR1 and indole-3-acetic acid-amido synthetase GH3.10, which catalyze the synthesis of jasmonates-amino acid conjugates and indole-3-acetic acid (IAA)-amino acid conjugates, respectively

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
16-555 0e+00

GH3 auxin-responsive promoter;


:

Pssm-ID: 460885  Cd Length: 531  Bit Score: 684.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    16 EFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATdpEEAFKSMVPLVTDVELEPYIKRMVDGDtSPILTGHPVP 95
Cdd:pfam03321   1 EFEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKS--AEDFKKRVPIVTYEDLEPYIERIANGE-PNILTSDPIT 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    96 AISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNF 175
Cdd:pfam03321  78 WFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPF 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   176 KagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRI- 254
Cdd:pfam03321 155 L-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVIn 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   255 TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSS 333
Cdd:pfam03321 230 TDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAAS 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   334 EGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIG 411
Cdd:pfam03321 308 EGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTYAGLYRYRIGDVVRVTG 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   412 FYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGHYAIFWEISGETNEDVL 490
Cdd:pfam03321 387 FYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGHYVLFWELKDEPDLEVL 464

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18407057   491 QDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSN 555
Cdd:pfam03321 465 EEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNSRE 531
 
Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
16-555 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 684.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    16 EFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATdpEEAFKSMVPLVTDVELEPYIKRMVDGDtSPILTGHPVP 95
Cdd:pfam03321   1 EFEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKS--AEDFKKRVPIVTYEDLEPYIERIANGE-PNILTSDPIT 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    96 AISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNF 175
Cdd:pfam03321  78 WFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPF 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   176 KagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRI- 254
Cdd:pfam03321 155 L-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVIn 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   255 TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSS 333
Cdd:pfam03321 230 TDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAAS 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   334 EGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIG 411
Cdd:pfam03321 308 EGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTYAGLYRYRIGDVVRVTG 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   412 FYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGHYAIFWEISGETNEDVL 490
Cdd:pfam03321 387 FYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGHYVLFWELKDEPDLEVL 464

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18407057   491 QDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSN 555
Cdd:pfam03321 465 EEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNSRE 531
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 9-572 4.49e-160

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 470.57  E-value: 4.49e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    9 DMNRVIDEF-DEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNaTDpEEAFKSMVPLVTDVELEPYIKRMVDGDTSP 87
Cdd:PLN02620  19 EKNKKALQFiEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGR-TD-RETFKKVMPVITYEDIQPDINRIANGDTSP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   88 ILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATT 167
Cdd:PLN02620  97 ILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLT 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  168 NVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKD 247
Cdd:PLN02620 177 SYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRT 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  248 GVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVS 327
Cdd:PLN02620 257 GTIDSQITDPSVREAVMKILKPDPKLADFVEAEC-RKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVC 335

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  328 HDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV--------------SETGEGEEKPVGLTQVKIGEEYEVVIT 393
Cdd:PLN02620 336 TMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVhrnngvtnsislpkSLNEKEQQELVDLVDVKLGQEYELVVT 415

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  394 NYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPG 473
Cdd:PLN02620 416 TYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPG 495

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  474 HYAIFWEI--SGET--NEDVLQDCCNCLDRAFiDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMP 548
Cdd:PLN02620 496 HYVLFWELclNGSTpiPPSVFEDCCLTIEESL-NSVYRQGRVSdKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTP 574

                        570       580
                 ....*....|....*....|....
gi 18407057  549 RCVKpsNAKVLQILCENVVSSYFS 572
Cdd:PLN02620 575 RCVK--FAPIIELLNSRVVSNYFS 596
 
Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
16-555 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 684.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    16 EFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNATdpEEAFKSMVPLVTDVELEPYIKRMVDGDtSPILTGHPVP 95
Cdd:pfam03321   1 EFEKLTKNAAEVQEEVLREILKRNANTEYGKRHGFGEIKS--AEDFKKRVPIVTYEDLEPYIERIANGE-PNILTSDPIT 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    96 AISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNF 175
Cdd:pfam03321  78 WFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGGLPAGPASTSYYKSDPF 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   176 KagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRI- 254
Cdd:pfam03321 155 L-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWEELCEDIRTGTLSNVIn 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   255 TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSS 333
Cdd:pfam03321 230 TDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLRHYFGGLPLVSEGYAAS 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   334 EGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIG 411
Cdd:pfam03321 308 EGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTYAGLYRYRIGDVVRVTG 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   412 FYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGHYAIFWEISGETNEDVL 490
Cdd:pfam03321 387 FYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGHYVLFWELKDEPDLEVL 464

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18407057   491 QDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSN 555
Cdd:pfam03321 465 EEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVNSRE 531
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 9-572 4.49e-160

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 470.57  E-value: 4.49e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057    9 DMNRVIDEF-DEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGNaTDpEEAFKSMVPLVTDVELEPYIKRMVDGDTSP 87
Cdd:PLN02620  19 EKNKKALQFiEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGR-TD-RETFKKVMPVITYEDIQPDINRIANGDTSP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   88 ILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATT 167
Cdd:PLN02620  97 ILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLT 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  168 NVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKD 247
Cdd:PLN02620 177 SYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRT 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  248 GVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVS 327
Cdd:PLN02620 257 GTIDSQITDPSVREAVMKILKPDPKLADFVEAEC-RKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVC 335

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  328 HDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV--------------SETGEGEEKPVGLTQVKIGEEYEVVIT 393
Cdd:PLN02620 336 TMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVhrnngvtnsislpkSLNEKEQQELVDLVDVKLGQEYELVVT 415

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  394 NYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPG 473
Cdd:PLN02620 416 TYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPG 495

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  474 HYAIFWEI--SGET--NEDVLQDCCNCLDRAFiDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMP 548
Cdd:PLN02620 496 HYVLFWELclNGSTpiPPSVFEDCCLTIEESL-NSVYRQGRVSdKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTP 574

                        570       580
                 ....*....|....*....|....
gi 18407057  549 RCVKpsNAKVLQILCENVVSSYFS 572
Cdd:PLN02620 575 RCVK--FAPIIELLNSRVVSNYFS 596
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
 18-575 4.76e-158

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 464.91  E-value: 4.76e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   18 DEMTRNAHQVQKQTLKEILLKNQSAIYLQNCGLNGnATDpEEAFKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPAI 97
Cdd:PLN02249  28 EEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNG-AVD-RKTFKSKVPVVTYEDLKTEIQRISNGDRSPILSSHPITEF 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   98 SLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFKA 177
Cdd:PLN02249 106 LTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTSYYKSDHFRT 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  178 gmKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITVP 257
Cdd:PLN02249 186 --SDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTGTLSSKIFDP 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  258 SVRTAMSKLLT-PNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEGW 336
Cdd:PLN02249 264 AIKNRMSKILNkPDQELAEFLIGVC-SQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMASTIYASSESY 342

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  337 IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEG---EEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIGFY 413
Cdd:PLN02249 343 FGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGaldETSLVELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFH 422

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  414 NNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHYAIFWEISGE------TNE 487
Cdd:PLN02249 423 NSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYWELLGRdqsnalPSD 502

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  488 DVLQDCCNCLDRAfIDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVkpSNAKVLQILCENV 566
Cdd:PLN02249 503 EVMAKCCLEMEES-LNSVYRQSRVSdKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCV--SLTPIMELLDSRV 579


                 ....*....
gi 18407057  567 VSSYFSTAF 575
Cdd:PLN02249 580 VSAHFSPSL 588
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
 17-572 1.78e-145

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 432.83  E-value: 1.78e-145
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   17 FDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCgLNGNATdpEEAFKSMVPLVTDVELEPYIKRMVDGDTSPILTGHPVPA 96
Cdd:PLN02247  17 LEDLTTNACQIQQQVLEEILTQNAGTEYLRSF-LDGESD--KQSFKNKVPVVNYEDIKPCIERIANGESSSIISAQPITE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057   97 ISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVPVGTATTNVYRNPNFK 176
Cdd:PLN02247  94 LLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFR 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  177 AGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEIVTDIKDGVLSNRITV 256
Cdd:PLN02247 174 NRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVSDWITD 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  257 PSVRTAMSKLLT-PNPELAETIRTKCMSLSnWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYAGDLPLVSHDYGSSEG 335
Cdd:PLN02247 254 PSCRNAVSSILSkPNSELADLIESECSGKS-WEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSEC 332

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  336 WIAANVTPRLSPEEATFAVIPNLGYFEFLPVsETGEGEEKP--------------------VGLTQVKIGEEYEVVITNY 395
Cdd:PLN02247 333 YFGINLKPLSDPSDVSYTLLPNMAYFEFLPV-DKNNGEVIHfvqcngtdddddalkedleiVDLVDVKVGHYYELVVTTF 411

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  396 AGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHY 475
Cdd:PLN02247 412 TGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIPGHY 491

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18407057  476 AIFWEISGETNED-------VLQDCCNCLDRAfIDAGYvssRKC----KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQ 544
Cdd:PLN02247 492 VLFWELKTRGSNDppeldpkIMEQCCSTVEES-LDSVY---RRCrkrdKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQ 567

                        570       580
                 ....*....|....*....|....*...
gi 18407057  545 FKMPRCVKPSNAkvLQILCENVVSSYFS 572
Cdd:PLN02247 568 YKTPRCIKSEEA--LKILDSRVIGRFFS 593
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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