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Conserved domains on  [gi|18399805|ref|NP_566440|]
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SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10494974)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H+-ATPases (PM H+-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Auxin_inducible super family cl47743
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 20-115 5.29e-13

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


The actual alignment was detected with superfamily member pfam02519:

Pssm-ID: 460580  Cd Length: 92  Bit Score: 60.35  E-value: 5.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18399805    20 QLGRSYSYTSLRSKSARRDPQDHlqdVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQqryEEDDNEDGSC 99
Cdd:pfam02519   3 QMARKWQKRAALGRKRISSPRTT---SSSDVPEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMS---EEEFGFPSDG 76

                          90
                  ....*....|....*.
gi 18399805   100 IITVKCEVVLFDHLLW 115
Cdd:pfam02519  77 PITLPCDVVVFEYLLS 92
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 20-115 5.29e-13

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 60.35  E-value: 5.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18399805    20 QLGRSYSYTSLRSKSARRDPQDHlqdVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQqryEEDDNEDGSC 99
Cdd:pfam02519   3 QMARKWQKRAALGRKRISSPRTT---SSSDVPEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMS---EEEFGFPSDG 76

                          90
                  ....*....|....*.
gi 18399805   100 IITVKCEVVLFDHLLW 115
Cdd:pfam02519  77 PITLPCDVVVFEYLLS 92
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 20-115 5.29e-13

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 60.35  E-value: 5.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18399805    20 QLGRSYSYTSLRSKSARRDPQDHlqdVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQqryEEDDNEDGSC 99
Cdd:pfam02519   3 QMARKWQKRAALGRKRISSPRTT---SSSDVPEKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMS---EEEFGFPSDG 76

                          90
                  ....*....|....*.
gi 18399805   100 IITVKCEVVLFDHLLW 115
Cdd:pfam02519  77 PITLPCDVVVFEYLLS 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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