NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|18411465|ref|NP_567196|]
View 

SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10494974)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H+-ATPases (PM H+-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 8-89 1.11e-24

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


:

Pssm-ID: 460580  Cd Length: 92  Bit Score: 89.62  E-value: 1.11e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411465     8 MSHWSFHIPRLHHHEHDHEKVPKGCLAVKVGqgEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFR 87
Cdd:pfam02519  11 RAALGRKRISSPRTTSSSDVPEKGHFVVYVG--DERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFE 88


                  ..
gi 18411465    88 YV 89
Cdd:pfam02519  89 YL 90
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 8-89 1.11e-24

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 89.62  E-value: 1.11e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411465     8 MSHWSFHIPRLHHHEHDHEKVPKGCLAVKVGqgEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFR 87
Cdd:pfam02519  11 RAALGRKRISSPRTTSSSDVPEKGHFVVYVG--DERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFE 88


                  ..
gi 18411465    88 YV 89
Cdd:pfam02519  89 YL 90
PLN03219 PLN03219
uncharacterized protein; Provisional
 28-89 1.15e-17

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 72.48  E-value: 1.15e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18411465   28 VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQK-GTITIPCHVEEFRYV 89
Cdd:PLN03219  39 VPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSmGGLTIPCREESFLHL 101
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 8-89 1.11e-24

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 89.62  E-value: 1.11e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411465     8 MSHWSFHIPRLHHHEHDHEKVPKGCLAVKVGqgEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFR 87
Cdd:pfam02519  11 RAALGRKRISSPRTTSSSDVPEKGHFVVYVG--DERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFE 88


                  ..
gi 18411465    88 YV 89
Cdd:pfam02519  89 YL 90
PLN03219 PLN03219
uncharacterized protein; Provisional
 28-89 1.15e-17

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 72.48  E-value: 1.15e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18411465   28 VPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQK-GTITIPCHVEEFRYV 89
Cdd:PLN03219  39 VPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSmGGLTIPCREESFLHL 101
PLN03220 PLN03220
uncharacterized protein; Provisional
 17-86 6.01e-15

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 65.15  E-value: 6.01e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18411465   17 RLHHHEHDHekVPKGCLAVKVGQGEEQE--RFVIPVMYFNHPLFGQLLKEAEEEFGFAQK-GTITIPCHVEEF 86
Cdd:PLN03220  26 RTSSSSSDH--VPKGHVAVYVGEQIEMEkkRFVVPISFLNHPSFKEFLSRAEEEFGFNHPmGGLTIPCREEVF 96
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 28-87 1.53e-12

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 59.01  E-value: 1.53e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18411465   28 VPKGCLAVKVGqgEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFR 87
Cdd:PLN03090  40 VPKGHFPVYVG--ENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVFR 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH