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Conserved domains on  [gi|18414102|ref|NP_567412|]
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receptor like protein 50 [Arabidopsis thaliana]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 1-823 2.40e-71

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 254.39  E-value: 2.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102    1 MITIIWSLCLIFCLSNSilviakdlclpDQRDALLEFKNEFSIPspdsdlmliLQTTAKWRNNTDCCSWGGISCDPKTGV 80
Cdd:PLN00113  12 LIFMLFFLFLNFSMLHA-----------EELELLLSFKSSINDP---------LKYLSNWNSSADVCLWQGITCNNSSRV 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   81 VVeLDLGNSDLNGRLrsNSSLFRLQHLQSLDLSYNDLSCTLPDSSGNFKY-LRVLNLLGCNLFGEIPTSlrSLSYLTDLD 159
Cdd:PLN00113  72 VS-IDLSGKNISGKI--SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLRYLNLSNNNFTGSIPRG--SIPNLETLD 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  160 LSyNDDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFF 239
Cdd:PLN00113 147 LS-NNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  240 GKIPTSLGSLSNLTDLDISKNEFTSEGPdsmSSLNRLTDFQLMLlnlssltnvdLSSNQFKAMLPSNMSSLSKLEAFDIS 319
Cdd:PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIP---SSLGNLKNLQYLF----------LYQNKLSGPIPPSIFSLQKLISLDLS 292

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  320 GNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKIGnISSPSNLQELYIGENNINGPIPRSILKlvglsalslsfwdtggi 399
Cdd:PLN00113 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGK----------------- 354

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  400 vdfsiflqlkslrsldlsginlnissshhlpshmmhlilsscnisqfpkflenQTSLYHLDISANQIEGQVPEWLwrlpt 479
Cdd:PLN00113 355 -----------------------------------------------------HNNLTVLDLSTNNLTGEIPEGL----- 376

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  480 lryvniaqnAFSGELTMLpnpiysfIASDNKFSGEIPRavceigtlvlsnnnfsgSIPPCfeisnKTLSILHLRNNSLSG 559
Cdd:PLN00113 377 ---------CSSGNLFKL-------ILFSNSLEGEIPK-----------------SLGAC-----RSLRRVRLQDNSFSG 418

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  560 VIPEESLHGYLRS-LDVGSNRLSGqfpkslincsylqflnveenRINDTfpSWlkSLPNLQLLVLRSNEFHGPIfspGDS 638
Cdd:PLN00113 419 ELPSEFTKLPLVYfLDISNNNLQG--------------------RINSR--KW--DMPSLQMLSLARNKFFGGL---PDS 471

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  639 LSFSKLRFFDISENRFSGVLPSDYfvgwsvmSSFVDIIDntpgftvvgddqesfhksvvltikglnmelvgsgfeiyktI 718
Cdd:PLN00113 472 FGSKRLENLDLSRNQFSGAVPRKL-------GSLSELMQ----------------------------------------L 504

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  719 DVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNMLE 798
Cdd:PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584

                        810       820
                 ....*....|....*....|....*
gi 18414102  799 GPIPQGTQIQSQNSSSFAENPGLCG 823
Cdd:PLN00113 585 GSLPSTGAFLAINASAVAGNIDLCG 609
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 1-823 2.40e-71

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 254.39  E-value: 2.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102    1 MITIIWSLCLIFCLSNSilviakdlclpDQRDALLEFKNEFSIPspdsdlmliLQTTAKWRNNTDCCSWGGISCDPKTGV 80
Cdd:PLN00113  12 LIFMLFFLFLNFSMLHA-----------EELELLLSFKSSINDP---------LKYLSNWNSSADVCLWQGITCNNSSRV 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   81 VVeLDLGNSDLNGRLrsNSSLFRLQHLQSLDLSYNDLSCTLPDSSGNFKY-LRVLNLLGCNLFGEIPTSlrSLSYLTDLD 159
Cdd:PLN00113  72 VS-IDLSGKNISGKI--SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLRYLNLSNNNFTGSIPRG--SIPNLETLD 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  160 LSyNDDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFF 239
Cdd:PLN00113 147 LS-NNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  240 GKIPTSLGSLSNLTDLDISKNEFTSEGPdsmSSLNRLTDFQLMLlnlssltnvdLSSNQFKAMLPSNMSSLSKLEAFDIS 319
Cdd:PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIP---SSLGNLKNLQYLF----------LYQNKLSGPIPPSIFSLQKLISLDLS 292

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  320 GNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKIGnISSPSNLQELYIGENNINGPIPRSILKlvglsalslsfwdtggi 399
Cdd:PLN00113 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGK----------------- 354

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  400 vdfsiflqlkslrsldlsginlnissshhlpshmmhlilsscnisqfpkflenQTSLYHLDISANQIEGQVPEWLwrlpt 479
Cdd:PLN00113 355 -----------------------------------------------------HNNLTVLDLSTNNLTGEIPEGL----- 376

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  480 lryvniaqnAFSGELTMLpnpiysfIASDNKFSGEIPRavceigtlvlsnnnfsgSIPPCfeisnKTLSILHLRNNSLSG 559
Cdd:PLN00113 377 ---------CSSGNLFKL-------ILFSNSLEGEIPK-----------------SLGAC-----RSLRRVRLQDNSFSG 418

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  560 VIPEESLHGYLRS-LDVGSNRLSGqfpkslincsylqflnveenRINDTfpSWlkSLPNLQLLVLRSNEFHGPIfspGDS 638
Cdd:PLN00113 419 ELPSEFTKLPLVYfLDISNNNLQG--------------------RINSR--KW--DMPSLQMLSLARNKFFGGL---PDS 471

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  639 LSFSKLRFFDISENRFSGVLPSDYfvgwsvmSSFVDIIDntpgftvvgddqesfhksvvltikglnmelvgsgfeiyktI 718
Cdd:PLN00113 472 FGSKRLENLDLSRNQFSGAVPRKL-------GSLSELMQ----------------------------------------L 504

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  719 DVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNMLE 798
Cdd:PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584

                        810       820
                 ....*....|....*....|....*
gi 18414102  799 GPIPQGTQIQSQNSSSFAENPGLCG 823
Cdd:PLN00113 585 GSLPSTGAFLAINASAVAGNIDLCG 609
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
32-422 8.61e-26

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 111.18  E-value: 8.61e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  32 DALLEFKNEFSIPSPDSDLMLILQTTAKWRNNTDCCSWGGISCDPKTGVVVELDLGNSDLNGRLRSNSSLFRLQHLQSLD 111
Cdd:COG4886  23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELD 102

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 112 LSYNdlsctlpDSSGNFKYLRVLNLLGCNLfGEIPTSLRSLSYLTDLDLSYNdDLTgEILDSMGNLKHLRVLSLTSCKFT 191
Cdd:COG4886 103 LSGN-------EELSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNN-QLT-DLPEPLGNLTNLKSLDLSNNQLT 172

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 192 GkIPSSLGNLTYLTDLDLSWNYFTgELPDSMGNLKSLRVLNLhRCNFFGKIPTSLGSLSNLTDLDISKNEFTSEGPdsms 271
Cdd:COG4886 173 D-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDL-SGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE---- 245

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 272 slnrltdfqlmLLNLSSLTNVDLSSNQFKAMlpSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPL 351
Cdd:COG4886 246 -----------LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312

                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18414102 352 KIGNISSPSNLQELYIGENNINGPIPRSILKLVGLSALSLSFWDTGGIVDFSIFLQLKSLRSLDLSGINLN 422
Cdd:COG4886 313 LLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 171-324 7.55e-08

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 54.02  E-value: 7.55e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 171 LDSMGNL---KHLRVLSLTSCKFTgKIPSsLGNLTYLTDLDLSWNYFTgELpDSMGNLKSLRVLNLHRcNFFGKIpTSLG 247
Cdd:cd21340  14 ITKIDNLslcKNLKVLYLYDNKIT-KIEN-LEFLTNLTHLYLQNNQIE-KI-ENLENLVNLKKLYLGG-NRISVV-EGLE 87

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 248 SLSNLTDLDISK------NEFTSEgPDSMSSL-----------NRLTDFQlMLLNLSSLTNVDLSSNQFKAM--LPSNMS 308
Cdd:cd21340  88 NLTNLEELHIENqrlppgEKLTFD-PRSLAALsnslrvlnisgNNIDSLE-PLAPLRNLEQLDASNNQISDLeeLLDLLS 165

                       170
                ....*....|....*.
gi 18414102 309 SLSKLEAFDISGNSFS 324
Cdd:cd21340 166 SWPSLRELDLTGNPVC 181
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 27-75 2.24e-06

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 44.98  E-value: 2.24e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 18414102    27 LPDQRDALLEFKNEFSIPSPdsdlmlilqTTAKWRNN-TDCCSWGGISCD 75
Cdd:pfam08263   1 LNDDGQALLAFKSSLNDPPG---------ALSSWNSSsSDPCSWTGVTCD 41
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 1-823 2.40e-71

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 254.39  E-value: 2.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102    1 MITIIWSLCLIFCLSNSilviakdlclpDQRDALLEFKNEFSIPspdsdlmliLQTTAKWRNNTDCCSWGGISCDPKTGV 80
Cdd:PLN00113  12 LIFMLFFLFLNFSMLHA-----------EELELLLSFKSSINDP---------LKYLSNWNSSADVCLWQGITCNNSSRV 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   81 VVeLDLGNSDLNGRLrsNSSLFRLQHLQSLDLSYNDLSCTLPDSSGNFKY-LRVLNLLGCNLFGEIPTSlrSLSYLTDLD 159
Cdd:PLN00113  72 VS-IDLSGKNISGKI--SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLRYLNLSNNNFTGSIPRG--SIPNLETLD 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  160 LSyNDDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFF 239
Cdd:PLN00113 147 LS-NNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  240 GKIPTSLGSLSNLTDLDISKNEFTSEGPdsmSSLNRLTDFQLMLlnlssltnvdLSSNQFKAMLPSNMSSLSKLEAFDIS 319
Cdd:PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIP---SSLGNLKNLQYLF----------LYQNKLSGPIPPSIFSLQKLISLDLS 292

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  320 GNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKIGnISSPSNLQELYIGENNINGPIPRSILKlvglsalslsfwdtggi 399
Cdd:PLN00113 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGK----------------- 354

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  400 vdfsiflqlkslrsldlsginlnissshhlpshmmhlilsscnisqfpkflenQTSLYHLDISANQIEGQVPEWLwrlpt 479
Cdd:PLN00113 355 -----------------------------------------------------HNNLTVLDLSTNNLTGEIPEGL----- 376

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  480 lryvniaqnAFSGELTMLpnpiysfIASDNKFSGEIPRavceigtlvlsnnnfsgSIPPCfeisnKTLSILHLRNNSLSG 559
Cdd:PLN00113 377 ---------CSSGNLFKL-------ILFSNSLEGEIPK-----------------SLGAC-----RSLRRVRLQDNSFSG 418

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  560 VIPEESLHGYLRS-LDVGSNRLSGqfpkslincsylqflnveenRINDTfpSWlkSLPNLQLLVLRSNEFHGPIfspGDS 638
Cdd:PLN00113 419 ELPSEFTKLPLVYfLDISNNNLQG--------------------RINSR--KW--DMPSLQMLSLARNKFFGGL---PDS 471

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  639 LSFSKLRFFDISENRFSGVLPSDYfvgwsvmSSFVDIIDntpgftvvgddqesfhksvvltikglnmelvgsgfeiyktI 718
Cdd:PLN00113 472 FGSKRLENLDLSRNQFSGAVPRKL-------GSLSELMQ----------------------------------------L 504

                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  719 DVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNMLE 798
Cdd:PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584

                        810       820
                 ....*....|....*....|....*
gi 18414102  799 GPIPQGTQIQSQNSSSFAENPGLCG 823
Cdd:PLN00113 585 GSLPSTGAFLAINASAVAGNIDLCG 609
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 84-539 5.83e-50

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 190.83  E-value: 5.83e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   84 LDLGNSDLNGRLrsNSSLFRLQHLQSLDLSYNDLSCTLPDSSGNFKYLRVLNLLGCNLFGEIPTSLRSLSYLTDLDLSYN 163
Cdd:PLN00113 169 LDLGGNVLVGKI--PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYN 246

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  164 DdLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFFGKIP 243
Cdd:PLN00113 247 N-LTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP 325

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  244 TSLGSL------------------------SNLTDLDISKNEFTSEGPDSMSSLNRLtdFQLMLLNLS------------ 287
Cdd:PLN00113 326 VALTSLprlqvlqlwsnkfsgeipknlgkhNNLTVLDLSTNNLTGEIPEGLCSSGNL--FKLILFSNSlegeipkslgac 403

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  288 -SLTNVDLSSNQFKAMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKigNISSPSNLQELY 366
Cdd:PLN00113 404 rSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP--DSFGSKRLENLD 481

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  367 IGENNINGPIPRSILKLVGLSALSLSFWDTGGIVDfSIFLQLKSLRSLDLSGINLnissSHHLPShmmhlilsscNISQF 446
Cdd:PLN00113 482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQL----SGQIPA----------SFSEM 546

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  447 PkflenqtSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQNAFSGELTmlpnPIYSFIASDnkfsgeiprAVCEIGTLV 526
Cdd:PLN00113 547 P-------VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP----STGAFLAIN---------ASAVAGNID 606

                        490
                 ....*....|...
gi 18414102  527 LSNNNFSGSIPPC 539
Cdd:PLN00113 607 LCGGDTTSGLPPC 619
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
32-422 8.61e-26

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 111.18  E-value: 8.61e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  32 DALLEFKNEFSIPSPDSDLMLILQTTAKWRNNTDCCSWGGISCDPKTGVVVELDLGNSDLNGRLRSNSSLFRLQHLQSLD 111
Cdd:COG4886  23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELD 102

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 112 LSYNdlsctlpDSSGNFKYLRVLNLLGCNLfGEIPTSLRSLSYLTDLDLSYNdDLTgEILDSMGNLKHLRVLSLTSCKFT 191
Cdd:COG4886 103 LSGN-------EELSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNN-QLT-DLPEPLGNLTNLKSLDLSNNQLT 172

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 192 GkIPSSLGNLTYLTDLDLSWNYFTgELPDSMGNLKSLRVLNLhRCNFFGKIPTSLGSLSNLTDLDISKNEFTSEGPdsms 271
Cdd:COG4886 173 D-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDL-SGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE---- 245

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 272 slnrltdfqlmLLNLSSLTNVDLSSNQFKAMlpSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPL 351
Cdd:COG4886 246 -----------LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312

                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18414102 352 KIGNISSPSNLQELYIGENNINGPIPRSILKLVGLSALSLSFWDTGGIVDFSIFLQLKSLRSLDLSGINLN 422
Cdd:COG4886 313 LLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
109-501 1.11e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 104.63  E-value: 1.11e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 109 SLDLSYNDLSCTLPDSSGNFKYLRVLNLLGCNLFGEIPTSLRSLSYLTDLDLSYNDDLTGEILDSMGNLKHLRVLSLTSC 188
Cdd:COG4886  27 LLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN 106

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 189 KftgkipsSLGNLTYLTDLDLSWNYFTgELPDSMGNLKSLRVLNLHRCNFfGKIPTSLGSLSNLTDLDISKNEFTSEgPD 268
Cdd:COG4886 107 E-------ELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLTDL-PE 176

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 269 SMSSL----------NRLTDFQLMLLNLSSLTNVDLSSNQFKAmLPSNMSSLSKLEAFDISGNSFSgTIPsSLFMLPSLI 338
Cdd:COG4886 177 ELGNLtnlkeldlsnNQITDLPEPLGNLTNLEELDLSGNQLTD-LPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLE 253

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 339 KLDLGTNDFSGplkIGNISSPSNLQELYIGENNINGPIPRSILKLVGL-SALSLSFWDTGGIVDFSIFLQLKSLRSLDLS 417
Cdd:COG4886 254 ELDLSNNQLTD---LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLnSLLLLLLLLNLLELLILLLLLTTLLLLLLLL 330

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 418 GINLNISSSHHLPSHMMHLILSSCNISQFPKFLENQTSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQNAFSGELTML 497
Cdd:COG4886 331 KGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDA 410


                ....
gi 18414102 498 PNPI 501
Cdd:COG4886 411 VNTE 414
PLN03150 PLN03150
hypothetical protein; Provisional
 725-831 7.07e-22

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 101.05  E-value: 7.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  725 LEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFLARMNFSYNMLEGPIPQ- 803
Cdd:PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAa 509

                         90       100
                 ....*....|....*....|....*....
gi 18414102  804 -GTQIQSQNSSSFAENPGLCGAPLQKKCG 831
Cdd:PLN03150 510 lGGRLLHRASFNFTDNAGLCGIPGLRACG 538
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
107-559 3.91e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 90.76  E-value: 3.91e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 107 LQSLDLSYNDLSCTLPDSSGNFKYLRVLNLLGCNLFGEIPTSLRSLSYLTDLDLSYNDDLTGEILDSMGNLKHLRVLSLT 186
Cdd:COG4886   1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 187 SCKFTGKIPSSLGNLTYLTDLDLSWNyftgelpDSMGNLKSLRVLNLHRCNFfGKIPTSLGSLSNLTDLDISKNeftseg 266
Cdd:COG4886  81 LLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNN------ 146

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 267 pdsmsslnRLTDFQLMLLNLSSLTNVDLSSNQFKAmLPSNMSSLSKLEAFDISGNSFSgTIPSSLFMLPSLIKLDLGTND 346
Cdd:COG4886 147 --------QLTDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQ 216

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 347 FSG-PLKIGNISspsNLQELYIGENNINgpiprsilklvglsalslsfwdtggivDFSIFLQLKSLRSLDLSGinlniss 425
Cdd:COG4886 217 LTDlPEPLANLT---NLETLDLSNNQLT---------------------------DLPELGNLTNLEELDLSN------- 259

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 426 shhlpshmmhlilssCNISQFPKfLENQTSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQNAFSGELTMLPNPIYSFI 505
Cdd:COG4886 260 ---------------NQLTDLPP-LANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTL 323

                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|....
gi 18414102 506 ASDNKFSGEIPRAVCEIGTLVLSNNNFSGSIPPCFEISNKTLSILHLRNNSLSG 559
Cdd:COG4886 324 LLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEA 377
PLN03150 PLN03150
hypothetical protein; Provisional
 163-249 2.05e-15

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 80.63  E-value: 2.05e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  163 NDDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFFGKI 242
Cdd:PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506


                 ....*..
gi 18414102  243 PTSLGSL 249
Cdd:PLN03150 507 PAALGGR 513
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
316-766 6.81e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 77.67  E-value: 6.81e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 316 FDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKIGNISSPSNLQELYIGENNINGPIPRSILKLVGLSALSLSFWD 395
Cdd:COG4886   3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 396 TGGIVDFSIFLQLKSLRSLDLSGiNLNISSSHHLPShmmhLILSSCNISQFPKFLENQTSLYHLDISANQIEgQVPEWLW 475
Cdd:COG4886  83 SLLLLGLTDLGDLTNLTELDLSG-NEELSNLTNLES----LDLSGNQLTDLPEELANLTNLKELDLSNNQLT-DLPEPLG 156

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 476 RLPTLRYVNIAQNAFSGeltmLPNPIYSFIAsdnkfsgeipravceIGTLVLSNNNFSgSIPPcfeisnktlSILHLRNn 555
Cdd:COG4886 157 NLTNLKSLDLSNNQLTD----LPEELGNLTN---------------LKELDLSNNQIT-DLPE---------PLGNLTN- 206

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 556 slsgvipeeslhgyLRSLDVGSNRLSgQFPKSLINCSYLQFLNVEENRINDTfpSWLKSLPNLQLLVLRSNEfhgpIFSP 635
Cdd:COG4886 207 --------------LEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLTDL--PELGNLTNLEELDLSNNQ----LTDL 265

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 636 GDSLSFSKLRFFDISENRFSGVLPSDYFVGWSVMSSFVDIIDNTPGFTVVGDDQESFHKSVVLTIKGLNMELVGSGFEIY 715
Cdd:COG4886 266 PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLS 345

                       410       420       430       440       450
                ....*....|....*....|....*....|....*....|....*....|.
gi 18414102 716 KTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSL 766
Cdd:COG4886 346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTT 396
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
293-634 3.64e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.74  E-value: 3.64e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 293 DLSSNQFKAMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSGPLKIGNISSPSNLQELYIGENNI 372
Cdd:COG4886   5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 373 NGPIPRSILKLVGLSALSLSfwdtggivDFSIFLQLKSLRSLDLSGINL-NISSSHHLPSHMMHLILSSCNISQFPKFLE 451
Cdd:COG4886  85 LLLGLTDLGDLTNLTELDLS--------GNEELSNLTNLESLDLSGNQLtDLPEELANLTNLKELDLSNNQLTDLPEPLG 156

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 452 NQTSLYHLDISANQIEGqVPEWLWRLPTLRYVNIAQNafsgELTMLPNPIYSFIA------SDNKFSgEIPRAVCEIG-- 523
Cdd:COG4886 157 NLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNN----QITDLPEPLGNLTNleeldlSGNQLT-DLPEPLANLTnl 230

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 524 -TLVLSNNNFSgSIPpcfEISN-KTLSILHLRNNSLSGvIPEESLHGYLRSLDVGSNRLSGQFPKSLINCSYLQFLNVEE 601
Cdd:COG4886 231 eTLDLSNNQLT-DLP---ELGNlTNLEELDLSNNQLTD-LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLL 305

                       330       340       350
                ....*....|....*....|....*....|...
gi 18414102 602 NRINDTFPSWLKSLPNLQLLVLRSNEFHGPIFS 634
Cdd:COG4886 306 LLLNLLELLILLLLLTTLLLLLLLLKGLLVTLT 338
PLN03150 PLN03150
hypothetical protein; Provisional
 63-199 4.18e-14

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 76.39  E-value: 4.18e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   63 NTDCCS-----WGGISC--DPKTG--VVVELDLGNSDLNGRLRSNSSlfRLQHLQSLDLSYNdlsctlpdssgnfkylrv 133
Cdd:PLN03150 393 NGDPCVpqqhpWSGADCqfDSTKGkwFIDGLGLDNQGLRGFIPNDIS--KLRHLQSINLSGN------------------ 452

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18414102  134 lnllgcNLFGEIPTSLRSLSYLTDLDLSYNdDLTGEILDSMGNLKHLRVLSLTSCKFTGKIPSSLG 199
Cdd:PLN03150 453 ------SIRGNIPPSLGSITSLEVLDLSYN-SFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
570-799 7.41e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 65.34  E-value: 7.41e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 570 LRSLDVGSNRLSgQFPKSLINCSYLQFLNVEENRINDtFPSWLKSLPNLQLLVLRSNEFHGpifSPGDSLSFSKLRFFDI 649
Cdd:COG4886 115 LESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLTD-LPEPLGNLTNLKSLDLSNNQLTD---LPEELGNLTNLKELDL 189

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 650 SENRFSgVLPSdyfvgwsvmssfvdiidntpgftvvgddqesfhksvvlTIKGLNmELvgsgfeiyKTIDVSGNRLEgDI 729
Cdd:COG4886 190 SNNQIT-DLPE--------------------------------------PLGNLT-NL--------EELDLSGNQLT-DL 220

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 730 PESIGILKELIVLNMSNNAFTGhiPPSLSNLSNLQSLDLSQNRLSgSIPgELGELTFLARMNFSYNMLEG 799
Cdd:COG4886 221 PEPLANLTNLETLDLSNNQLTD--LPELGNLTNLEELDLSNNQLT-DLP-PLANLTNLKTLDLSNNQLTD 286
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
434-787 2.73e-09

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 60.33  E-value: 2.73e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 434 MHLILSSCNISQFPKFLENQTSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQNAFSGELTMLPNPIYSFIASDNKFSG 513
Cdd:COG4886  10 LKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGL 89

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 514 EIPRAVCEIGTLVLSNNNFSGSIppcfeisnKTLSILHLRNNSLSGVIPEESLHGYLRSLDVGSNRLSgQFPKSLINCSY 593
Cdd:COG4886  90 TDLGDLTNLTELDLSGNEELSNL--------TNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTN 160

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 594 LQFLNVEENRINDtFPSWLKSLPNLQLLVLRSNEFHgpifSPGDSLS-FSKLRFFDISENRFSgVLPSDyfvgwsvmssf 672
Cdd:COG4886 161 LKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT----DLPEPLGnLTNLEELDLSGNQLT-DLPEP----------- 223

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 673 vdiidntpgftvvgddqesfhksvvltIKGLNmELvgsgfeiyKTIDVSGNRLEgDIPEsIGILKELIVLNMSNNAFTGh 752
Cdd:COG4886 224 ---------------------------LANLT-NL--------ETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTD- 264

                       330       340       350
                ....*....|....*....|....*....|....*
gi 18414102 753 iPPSLSNLSNLQSLDLSQNRLSGSIPGELGELTFL 787
Cdd:COG4886 265 -LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGL 298
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
326-645 4.44e-09

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 60.10  E-value: 4.44e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  326 TIPSSLfmlP-SLIKLDLGTNDFsgplkignISSPSNLQ----ELYIGENNingpiprsilklvgLSALSLSFWDTGGIV 400
Cdd:PRK15370 192 TIPACI---PeQITTLILDNNEL--------KSLPENLQgnikTLYANSNQ--------------LTSIPATLPDTIQEM 246

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  401 DFSIflqlkslrsldlsgiNLNISSSHHLPSHMMHLILSSCNISQFPKFLENQtsLYHLDISANQIEGqVPEwlwRLPT- 479
Cdd:PRK15370 247 ELSI---------------NRITELPERLPSALQSLDLFHNKISCLPENLPEE--LRYLSVYDNSIRT-LPA---HLPSg 305

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  480 LRYVNIAQNAFSGELTMLPNPIYSFIASDNKFSgeipravceigtlvlsnnNFSGSIPPcfeisnkTLSILHLRNNSLSg 559
Cdd:PRK15370 306 ITHLNVQSNSLTALPETLPPGLKTLEAGENALT------------------SLPASLPP-------ELQVLDVSKNQIT- 359

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  560 VIPeESLHGYLRSLDVGSNRLSgQFPKSLIncSYLQFLNVEEN---RINDTFPSWL------------------KSLPNL 618
Cdd:PRK15370 360 VLP-ETLPPTITTLDVSRNALT-NLPENLP--AALQIMQASRNnlvRLPESLPHFRgegpqptriiveynpfseRTIQNM 435

                        330       340
                 ....*....|....*....|....*....
gi 18414102  619 QLLvLRSNEFHGP--IFSPGDslsFSKLR 645
Cdd:PRK15370 436 QRL-MSSVGYQGPrvLFAMGD---FSIVR 460
PLN03150 PLN03150
hypothetical protein; Provisional
 292-399 4.73e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.21  E-value: 4.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  292 VDLSSNQFKAMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSG--PLKIGNISSpsnLQELYIGE 369
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGsiPESLGQLTS---LRILNLNG 499

                         90       100       110
                 ....*....|....*....|....*....|
gi 18414102  370 NNINGPIPRSILKLVgLSALSLSFWDTGGI 399
Cdd:PLN03150 500 NSLSGRVPAALGGRL-LHRASFNFTDNAGL 528
PLN03150 PLN03150
hypothetical protein; Provisional
 183-270 1.52e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.29  E-value: 1.52e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  183 LSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFFGKIPTSLGSLSNLTDLDISKNEF 262
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                 ....*...
gi 18414102  263 TSEGPDSM 270
Cdd:PLN03150 503 SGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 216-290 2.33e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 57.90  E-value: 2.33e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18414102  216 GELPDSMGNLKSLRVLNLHRCNFFGKIPTSLGSLSNLTDLDISKNEFTSEGPDsmsSLNRLTDFQLMLLNLSSLT 290
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE---SLGQLTSLRILNLNGNSLS 503
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 171-324 7.55e-08

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 54.02  E-value: 7.55e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 171 LDSMGNL---KHLRVLSLTSCKFTgKIPSsLGNLTYLTDLDLSWNYFTgELpDSMGNLKSLRVLNLHRcNFFGKIpTSLG 247
Cdd:cd21340  14 ITKIDNLslcKNLKVLYLYDNKIT-KIEN-LEFLTNLTHLYLQNNQIE-KI-ENLENLVNLKKLYLGG-NRISVV-EGLE 87

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 248 SLSNLTDLDISK------NEFTSEgPDSMSSL-----------NRLTDFQlMLLNLSSLTNVDLSSNQFKAM--LPSNMS 308
Cdd:cd21340  88 NLTNLEELHIENqrlppgEKLTFD-PRSLAALsnslrvlnisgNNIDSLE-PLAPLRNLEQLDASNNQISDLeeLLDLLS 165

                       170
                ....*....|....*.
gi 18414102 309 SLSKLEAFDISGNSFS 324
Cdd:cd21340 166 SWPSLRELDLTGNPVC 181
PLN03150 PLN03150
hypothetical protein; Provisional
 286-349 1.00e-07

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 55.59  E-value: 1.00e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18414102  286 LSSLTNVDLSSNQFKAMLPSNMSSLSKLEAFDISGNSFSGTIPSSLFMLPSLIKLDLGTNDFSG 349
Cdd:PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 131-466 1.85e-07

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 55.27  E-value: 1.85e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   131 LRVLNLLGCNLFGEIPTSLRSLSYLTDLDLSYNDDLtgEILDSMGNLKHLRVLSLTSCKFTGKIPSSLGNLTYLtDLDLS 210
Cdd:PLN03210  659 LETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENL--EILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWL-DLDET 735

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   211 wnyFTGELPDsmgNLKSLRVLNLHRCNFfgKIPTSLGSLSNLTdldiskneftsegpdsmsslnrltdfQLMLLNLSSLT 290
Cdd:PLN03210  736 ---AIEEFPS---NLRLENLDELILCEM--KSEKLWERVQPLT--------------------------PLMTMLSPSLT 781

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   291 NVDLSSNQFKAMLPSNMSSLSKLEAFDISGNSFSGTIPSSLfMLPSLIKLDLgtNDFSGPLKIGNISspSNLQELYIGEN 370
Cdd:PLN03210  782 RLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDL--SGCSRLRTFPDIS--TNISDLNLSRT 856

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   371 NINgPIPRSILKLVGLSALSLSFWDTGGIVDFSIFlQLKSLRSLD------LSGINLNISSS----------HHLPSHMM 434
Cdd:PLN03210  857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNIS-KLKHLETVDfsdcgaLTEASWNGSPSevamatdnihSKLPSTVC 934

                         330       340       350
                  ....*....|....*....|....*....|..
gi 18414102   435 HLILSSCNISQFPkFLENQTSLYHLDISANQI 466
Cdd:PLN03210  935 INFINCFNLDQEA-LLQQQSIFKQLILSGEEV 965
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 131-297 3.71e-07

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 51.71  E-value: 3.71e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 131 LRVLNLLGcNLFGEIPtSLRSLSYLTDLDLSYNddltgEI--LDSMGNLKHLRVLSLTSCKFTgKIpSSLGNLTYLTDLD 208
Cdd:cd21340  26 LKVLYLYD-NKITKIE-NLEFLTNLTHLYLQNN-----QIekIENLENLVNLKKLYLGGNRIS-VV-EGLENLTNLEELH 96

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 209 LS-WNYFTGEL----PDSMGNL-KSLRVLNLHRCNFfgKIPTSLGSLSNLTDLDISKNEftsegpdsmssLNRLTDFQLM 282
Cdd:cd21340  97 IEnQRLPPGEKltfdPRSLAALsNSLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQ-----------ISDLEELLDL 163

                       170
                ....*....|....*
gi 18414102 283 LLNLSSLTNVDLSSN 297
Cdd:cd21340 164 LSSWPSLRELDLTGN 178
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 99-319 1.28e-06

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 52.57  E-value: 1.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102    99 SSLFRLQHLQSLDLSYNDLSCTLPdSSGNFKYLRVLNLLGCN---LFGEIPTSLRSLsyltDLDLSYNDDLTGEIldSMG 175
Cdd:PLN03210  675 SSIQYLNKLEDLDMSRCENLEILP-TGINLKSLYRLNLSGCSrlkSFPDISTNISWL----DLDETAIEEFPSNL--RLE 747

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   176 NLKHLRVLSLTSCKFTGKIPSSLGNLTY----LTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNFFGKIPTSLgSLSN 251
Cdd:PLN03210  748 NLDELILCEMKSEKLWERVQPLTPLMTMlspsLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLES 826

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18414102   252 LTDLDISKNEFTSEGPD-----SMSSLNR--LTDFQLMLLNLSSLTNVDLSSNQFKAMLPSNMSSLSKLEAFDIS 319
Cdd:PLN03210  827 LESLDLSGCSRLRTFPDistniSDLNLSRtgIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFS 901
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
 27-75 2.24e-06

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 44.98  E-value: 2.24e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 18414102    27 LPDQRDALLEFKNEFSIPSPdsdlmlilqTTAKWRNN-TDCCSWGGISCD 75
Cdd:pfam08263   1 LNDDGQALLAFKSSLNDPPG---------ALSSWNSSsSDPCSWTGVTCD 41
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
724-799 3.80e-06

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 50.32  E-value: 3.80e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18414102 724 RLEGDIPESIGILKELIVLNMSNNAFTgHIPPSLSNLSNLQSLDLSQNRLSgSIPGELGELTFLARMNFSYNMLEG 799
Cdd:COG4886 100 ELDLSGNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD 173
PLN03150 PLN03150
hypothetical protein; Provisional
 550-630 2.94e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 47.89  E-value: 2.94e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  550 LHLRNNSLSGVIPEE--SLHgYLRSLDVGSNRLSGQFPKSLINCSYLQFLNVEENRINDTFPSWLKSLPNLQLLVLRSNE 627
Cdd:PLN03150 423 LGLDNQGLRGFIPNDisKLR-HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501


                 ...
gi 18414102  628 FHG 630
Cdd:PLN03150 502 LSG 504
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 163-466 3.62e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 46.96  E-value: 3.62e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 163 NDDLTGEILDSMGNLKHLR----VLSLTSCKFtgkIPSSLGNLTYLTDLDLSWNyFTGELPDsmgnlkslrvlNLHRCnf 238
Cdd:cd00116  11 KTERATELLPKLLCLQVLRlegnTLGEEAAKA---LASALRPQPSLKELCLSLN-ETGRIPR-----------GLQSL-- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 239 fgkiPTSLGSLSNLTDLDISKNEFTSEGPDSMSSLNRLTDFQLMLLNLSSL--TNVDLSSnqfKAMLPSNMsslsKLEAF 316
Cdd:cd00116  74 ----LQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLgdRGLRLLA---KGLKDLPP----ALEKL 142

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 317 DISGNSFSGTipsslfmlpslikldlGTNDFSGPLkigniSSPSNLQELYIGENNINGP-IPRSILKLVGLSAL-SLSFW 394
Cdd:cd00116 143 VLGRNRLEGA----------------SCEALAKAL-----RANRDLKELNLANNGIGDAgIRALAEGLKANCNLeVLDLN 201

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 395 DTG----GIVDFS-IFLQLKSLRSLDLSGINLNISSSHHLPSHMMH-------LILSSCNISQ-----FPKFLENQTSLY 457
Cdd:cd00116 202 NNGltdeGASALAeTLASLKSLEVLNLGDNNLTDAGAAALASALLSpnislltLSLSCNDITDdgakdLAEVLAEKESLL 281


                ....*....
gi 18414102 458 HLDISANQI 466
Cdd:cd00116 282 ELDLRGNKF 290
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 83-288 4.36e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 46.58  E-value: 4.36e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  83 ELDLGNS----DLNGRLRSNSSLFRLQHLQSLDLSYND-----LSCTLPDSSGNfkyLRVLNLLGCNLFGE--IPTS--L 149
Cdd:cd00116  85 ELDLSDNalgpDGCGVLESLLRSSSLQELKLNNNGLGDrglrlLAKGLKDLPPA---LEKLVLGRNRLEGAscEALAkaL 161

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 150 RSLSYLTDLDLSYN---DDLTGEILDSMGNLKHLRVLSLTSCKFT----GKIPSSLGNLTYLTDLDLSWNYFTG----EL 218
Cdd:cd00116 162 RANRDLKELNLANNgigDAGIRALAEGLKANCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDagaaAL 241

                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18414102 219 PDSM-GNLKSLRVLNLHRCNF----FGKIPTSLGSLSNLTDLDISKNEFTSEGPDSMSSLNRLTDFQLMLLNLSS 288
Cdd:cd00116 242 ASALlSPNISLLTLSLSCNDItddgAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316
LRR_8 pfam13855
Leucine rich repeat;
716-773 4.52e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 41.74  E-value: 4.52e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 18414102   716 KTIDVSGNRLEGDIPESIGILKELIVLNMSNNAFTGHIPPSLSNLSNLQSLDLSQNRL 773
Cdd:pfam13855   4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 201-507 4.72e-05

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 47.18  E-value: 4.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   201 LTYLTDLDLSWNYFTGELPD-SMGNlkSLRVLNLHRCNFFGKIPTSLGSLSNLTDLDISKNEFTSEGPDSmsslnrltdf 279
Cdd:PLN03210  633 LTGLRNIDLRGSKNLKEIPDlSMAT--NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG---------- 700

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   280 qlmlLNLSSLTNVDLSS-NQFKAML--PSNMSSLskleafDISGNSFSgTIPSSLFM--LPSLIKLDLGTNDFSG---PL 351
Cdd:PLN03210  701 ----INLKSLYRLNLSGcSRLKSFPdiSTNISWL------DLDETAIE-EFPSNLRLenLDELILCEMKSEKLWErvqPL 769

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   352 K-IGNISSPSnLQELYIGENNINGPIPRSILKLVGLSALSLsfWDTGGIVDFSIFLQLKSLRSLDLSG---------INL 421
Cdd:PLN03210  770 TpLMTMLSPS-LTRLFLSDIPSLVELPSSIQNLHKLEHLEI--ENCINLETLPTGINLESLESLDLSGcsrlrtfpdIST 846

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   422 NISSshhlpshmmhLILSSCNISQFPKFLENQTSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQ---------NAFSG 492
Cdd:PLN03210  847 NISD----------LNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDcgalteaswNGSPS 916

                         330
                  ....*....|....*
gi 18414102   493 ELTMLPNPIYSFIAS 507
Cdd:PLN03210  917 EVAMATDNIHSKLPS 931
PLN03150 PLN03150
hypothetical protein; Provisional
 573-660 9.01e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 9.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  573 LDVGSNRLSGQFPKSLINCSYLQFLNVEENRINDTFPSWLKSLPNLQLLVLRSNEFHGPIfsPGDSLSFSKLRFFDISEN 652
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI--PESLGQLTSLRILNLNGN 500


                 ....*...
gi 18414102  653 RFSGVLPS 660
Cdd:PLN03150 501 SLSGRVPA 508
PLN03150 PLN03150
hypothetical protein; Provisional
 522-616 1.18e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.96  E-value: 1.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  522 IGTLVLSNNNFSGSIPPcfEISN-KTLSILHLRNNSLSGVIPEE--SLHGyLRSLDVGSNRLSGQFPKSLINCSYLQFLN 598
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPN--DISKlRHLQSINLSGNSIRGNIPPSlgSITS-LEVLDLSYNSFNGSIPESLGQLTSLRILN 496

                         90
                 ....*....|....*...
gi 18414102  599 VEENRINDTFPSWLKSLP 616
Cdd:PLN03150 497 LNGNSLSGRVPAALGGRL 514
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 510-628 1.85e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 44.65  E-value: 1.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 510 KFSGEIPRAV----------CEIGTLVLSNNNFSGSIPPCFE--ISNKTLSILHLRNNSLS--------GVIPEESLHgy 569
Cdd:cd00116  61 NETGRIPRGLqsllqgltkgCGLQELDLSDNALGPDGCGVLEslLRSSSLQELKLNNNGLGdrglrllaKGLKDLPPA-- 138

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 18414102 570 LRSLDVGSNRLSGQ----FPKSLINCSYLQFLNVEENRIND-----TFPSwLKSLPNLQLLVLRSNEF 628
Cdd:cd00116 139 LEKLVLGRNRLEGAsceaLAKALRANRDLKELNLANNGIGDagiraLAEG-LKANCNLEVLDLNNNGL 205
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 94-264 2.04e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 43.62  E-value: 2.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  94 RLRSNSSLFRLQHLQSLDLSYNDLSCTlpDSSGNFKYLRVLNLlGCNLFGEIpTSLRSLSYLTDLDLSYNDDLTGEIL-- 171
Cdd:cd21340  35 KITKIENLEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYL-GGNRISVV-EGLENLTNLEELHIENQRLPPGEKLtf 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 172 --DSMGNL-KHLRVLSLTSCKFTgkIPSSLGNLTYLTDLDLSWNYFtgelpDSMGNLKSLrvlnlhrcnffgkiptsLGS 248
Cdd:cd21340 111 dpRSLAALsNSLRVLNISGNNID--SLEPLAPLRNLEQLDASNNQI-----SDLEELLDL-----------------LSS 166

                       170
                ....*....|....*.
gi 18414102 249 LSNLTDLDISKNEFTS 264
Cdd:cd21340 167 WPSLRELDLTGNPVCK 182
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 92-261 2.34e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 43.62  E-value: 2.34e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  92 NGRLRSNSSLFRLQHLQSLDLSYNdlsctlpdssgnfkYLRVLNllgcnlfgeiptSLRSLSYLTDLDLSYNDDLTGEIL 171
Cdd:cd21340  55 NNQIEKIENLENLVNLKKLYLGGN--------------RISVVE------------GLENLTNLEELHIENQRLPPGEKL 108

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 172 ----DSMGNL-KHLRVLSLTSCKFTgkIPSSLGNLTYLTDLDLSWNYFT--GELPDSMGNLKSLRVLNLHRC------NF 238
Cdd:cd21340 109 tfdpRSLAALsNSLRVLNISGNNID--SLEPLAPLRNLEQLDASNNQISdlEELLDLLSSWPSLRELDLTGNpvckkpKY 186

                       170       180
                ....*....|....*....|...
gi 18414102 239 FGKIPTSLGSLSNLTDLDISKNE 261
Cdd:cd21340 187 RDKIILASKSLEVLDGKEITDTE 209
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 286-464 3.47e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 42.85  E-value: 3.47e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 286 LSSLTNVDLSSNQFKAM-LPSNMSSLSKLEAFDisgNSFSgTIPSsLFMLPSLIKLDLGTNDFSgplKIGNISSPSNLQE 364
Cdd:cd21340   1 LKRITHLYLNDKNITKIdNLSLCKNLKVLYLYD---NKIT-KIEN-LEFLTNLTHLYLQNNQIE---KIENLENLVNLKK 72

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 365 LYIGENNIngpiprSIL----KLVGLSALSLS----------FWDtggivDFSIFLQLKSLRSLDLSGINL-NISSSHHL 429
Cdd:cd21340  73 LYLGGNRI------SVVegleNLTNLEELHIEnqrlppgeklTFD-----PRSLAALSNSLRVLNISGNNIdSLEPLAPL 141

                       170       180       190
                ....*....|....*....|....*....|....*...
gi 18414102 430 pSHMMHLILSSCNISQFPK---FLENQTSLYHLDISAN 464
Cdd:cd21340 142 -RNLEQLDASNNQISDLEElldLLSSWPSLRELDLTGN 178
LRR_8 pfam13855
Leucine rich repeat;
570-628 5.22e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.04  E-value: 5.22e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 18414102   570 LRSLDVGSNRLSGQFPKSLINCSYLQFLNVEENRINDTFPSWLKSLPNLQLLVLRSNEF 628
Cdd:pfam13855   3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
179-238 5.76e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 38.66  E-value: 5.76e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102   179 HLRVLSLTSCKFTGKIPSSLGNLTYLTDLDLSWNYFTGELPDSMGNLKSLRVLNLHRCNF 238
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 93-418 6.23e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 42.73  E-value: 6.23e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102  93 GRLRSNSSLFRLQHLQSLDLSYndlsCTLPDSSGNFkylrvlnllgcnlfgeIPTSLRSLSYLTDLDLSYNDdlTGEILD 172
Cdd:cd00116  11 KTERATELLPKLLCLQVLRLEG----NTLGEEAAKA----------------LASALRPQPSLKELCLSLNE--TGRIPR 68

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 173 SMGNLkhlrvlsltsckftgkiPSSLGNLTYLTDLDLSWNYFTGELPDSMGNL---KSLRVLNLHRCNFFG----KIPTS 245
Cdd:cd00116  69 GLQSL-----------------LQGLTKGCGLQELDLSDNALGPDGCGVLESLlrsSSLQELKLNNNGLGDrglrLLAKG 131

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 246 LGSLS-NLTDLDISKNEFTSEGPDSMSSLnrltdfqlmLLNLSSLTNVDLSSNQFK----AMLPSNMSSLSKLEAFDISG 320
Cdd:cd00116 132 LKDLPpALEKLVLGRNRLEGASCEALAKA---------LRANRDLKELNLANNGIGdagiRALAEGLKANCNLEVLDLNN 202

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 321 NSFSgtipsslfmlpsliklDLGTNDFSGPLKignisSPSNLQELYIGENNINGPIPR---SILKLVGLSALSLSFWDTG 397
Cdd:cd00116 203 NGLT----------------DEGASALAETLA-----SLKSLEVLNLGDNNLTDAGAAalaSALLSPNISLLTLSLSCND 261

                       330       340
                ....*....|....*....|....*.
gi 18414102 398 ----GIVDFSIFL-QLKSLRSLDLSG 418
Cdd:cd00116 262 itddGAKDLAEVLaEKESLLELDLRG 287
PLN03150 PLN03150
hypothetical protein; Provisional
 422-494 1.10e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.50  E-value: 1.10e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18414102  422 NISSSHHLPShmmhLILSSCNI-SQFPKFLENQTSLYHLDISANQIEGQVPEWLWRLPTLRYVNIAQNAFSGEL 494
Cdd:PLN03150 437 DISKLRHLQS----INLSGNSIrGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
LRR_8 pfam13855
Leucine rich repeat;
592-654 3.49e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.73  E-value: 3.49e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18414102   592 SYLQFLNVEENRINDTFPSWLKSLPNLQLLVLRSNEFHgpIFSPGDSLSFSKLRFFDISENRF 654
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
FBXL18_LRR pfam19729
F-box/LRR-repeat protein 18, LRR; This entry represents the leucine-rich repeats (LRR) from ...
 77-188 4.23e-03

F-box/LRR-repeat protein 18, LRR; This entry represents the leucine-rich repeats (LRR) from F-box/LRR repeat protein 18 (also known as F-box and leucine-rich repeat protein 18, FBXL18), associated with F-box domains. This protein is the substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex through its F-box and the LRR motifs mediate the protein-protein interactions required for the binding of the specific substrates by SCFs complexes.


Pssm-ID: 466163 [Multi-domain]  Cd Length: 594  Bit Score: 40.88  E-value: 4.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102    77 KTGVVVELDLGNSDLNGrlrsnSSLfrLQHLQSLDLSYNDLS-CTLP---------DSSGNFKYLRVLNLLGCNlFGEIP 146
Cdd:pfam19729 205 KNVSLEALQLPRSWLNG-----SSL--LQHLKFSNPFYLSFSrCTLSggqliqrvlNGGKDLRSLVSLNLSGCV-HCLLP 276

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18414102   147 TSL-----------------RSLSYLTDLDLSY-----NDDLTGEILDSMGNLKHLRVLSLTSC 188
Cdd:pfam19729 277 DSLlrkaeddidssivetlvACCPNLRHLNLSAahhhsSEGLGGHLCALLARLKHLRSLSLPVC 340
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 283-488 7.27e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 39.00  E-value: 7.27e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 283 LLNLSSLTNVDLSSNQfkamlpsnmssLSKLEafdisgnsfsgtipsSLFMLPSLIKLDLGTNDFSgplKIGNISSPSNL 362
Cdd:cd21340  42 LEFLTNLTHLYLQNNQ-----------IEKIE---------------NLENLVNLKKLYLGGNRIS---VVEGLENLTNL 92

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 363 QELYIGENNIngpiPRSilklvglsaLSLSFwDtggivDFSIFLQLKSLRSLDLSGinlnissshhlpshmmhlilssCN 442
Cdd:cd21340  93 EELHIENQRL----PPG---------EKLTF-D-----PRSLAALSNSLRVLNISG----------------------NN 131

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 18414102 443 ISQfPKFLENQTSLYHLDISANQIE--GQVPEWLWRLPTLRYVNIAQN 488
Cdd:cd21340 132 IDS-LEPLAPLRNLEQLDASNNQISdlEELLDLLSSWPSLRELDLTGN 178
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
729-798 9.29e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 39.53  E-value: 9.29e-03
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18414102 729 IPESIGILKELIVLNMSNNaftghipPSLSNLSNLQSLDLSQNRLSgSIPGELGELTFLARMNFSYNMLE 798
Cdd:COG4886  88 GLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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