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Conserved domains on  [gi|18416859|ref|NP_568275|]
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O-acyltransferase (WSD1-like) family protein [Arabidopsis thaliana]

Protein Classification

WSD1 family O-acyltransferase( domain architecture ID 13540762)

WSD1 family O-acyltransferase similar to Arabidopsis thaliana wax ester synthase/acyl-coenzyme A: diacylglycerol acyltransferase WSD1 which is required for stem wax ester biosynthesis in Arabidopsis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
WS_DGAT_C pfam06974
WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS) ...
327-471 1.34e-64

WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS)/diacylglycerol O-acyltransferases (DGAT). These enzymes are utilized for the in vivo production of biodiesel and other wax esters.


:

Pssm-ID: 462057  Cd Length: 144  Bit Score: 205.44  E-value: 1.34e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   327 WGNYFSFIFLPFTIGLqTDPLVYLKMSKSMMARKKHSYHAALVYFIIKiVLKVFGAKAAAELFDRPVRNTTTCVSNVIGP 406
Cdd:pfam06974   1 WGNRFGFVLLPLPTDL-DDPLERLRKAKASMDRKKRSLEAVLTYALLE-LLKLFGAKVAAALITRLLPNTTLVISNVPGP 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18416859   407 MEEISFRGHPVSYIAPSSYGH-SHALLIHLMSYADKMIISLAYDPTVISDPHKICDDMEESLKAMK 471
Cdd:pfam06974  79 REPLYFAGHPVKYIYPSVPGLpGQALNITIQSYAGKLRIGLAVDRDLIPDPHRLLDDFEEALEELK 144
acyl_WS_DGAT super family cl37191
acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, ...
6-472 3.06e-30

acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity]


The actual alignment was detected with superfamily member TIGR02946:

Pssm-ID: 274360 [Multi-domain]  Cd Length: 446  Bit Score: 122.41  E-value: 3.06e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859     6 EEPVSPMArvfqspgidLCAVTIMgfktkiNPDVVLDALKQNVS----KHPRF-----SSILSDNGAKWIE-TEVNVEDH 75
Cdd:TIGR02946  12 ETPTRPMH---------IGALAVF------EGPLSFEALRALLEsrlpLAPRFrqrlrEVPLGLGHPYWVEdPDFDLDYH 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    76 V---IVPyidaeeiGEGGQSFIDDYMSRLTMIPLDRSRPLWDIHILNVKTSEAEAVgFIRSHHSLGDGMSLISLMLACTH 152
Cdd:TIGR02946  77 VrrvALP-------APGTRRELLELVGRLMSTPLDRSRPLWEMHLIEGLAGGRFAV-LTKVHHALADGVAGLRLLARLLD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   153 KTSDPDMFSNAIPSMK--RRATMSHSLK---TKGWFlRSIFTIGSTMRLLWNTTIDMLLLLATVLFLKDTKTPLKAGAdv 227
Cdd:TIGR02946 149 DDPDPPPLPAPPPPPQpsTRGLLSGALSglpSALLR-RVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLNGPI-- 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   228 rSNPKRFYHRIISLDDIKLIKNAMNMTINDVLFGITQASLSHYLNRqygtkkeedgaltsyRNNLPDGiRFRVACTVNLR 307
Cdd:TIGR02946 226 -SRKRRFAAQSLPLADVKAVAKAFGVTINDVVLAAVAGALRRYLEE---------------RGELPDD-PLVAMVPVSLR 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   308 SDIGFKPLadmmvkdskcrwGNYFSFIFLPFTIGLQtDPLVYLKMSKSMMARKKHSYHAALVYFIIKIVLKV--FGAKAA 385
Cdd:TIGR02946 289 PMEDDSEG------------GNQVSAVLVPLPTGIA-DPVERLSAIHASMTRAKESGQAMGANALLALSGLLpaPLLRLA 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   386 AELF-DRPVRNTTTCVSNVIGPMEEISFRGHPVSYIAPSS-YGHSHALLIHLMSYADKMIISLAYDPTVISDPHKICDDM 463
Cdd:TIGR02946 356 LRALaRKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSpLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADAL 435

                  ....*....
gi 18416859   464 EESLKAMKA 472
Cdd:TIGR02946 436 EAALEELEA 444
 
Name Accession Description Interval E-value
WS_DGAT_C pfam06974
WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS) ...
327-471 1.34e-64

WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS)/diacylglycerol O-acyltransferases (DGAT). These enzymes are utilized for the in vivo production of biodiesel and other wax esters.


Pssm-ID: 462057  Cd Length: 144  Bit Score: 205.44  E-value: 1.34e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   327 WGNYFSFIFLPFTIGLqTDPLVYLKMSKSMMARKKHSYHAALVYFIIKiVLKVFGAKAAAELFDRPVRNTTTCVSNVIGP 406
Cdd:pfam06974   1 WGNRFGFVLLPLPTDL-DDPLERLRKAKASMDRKKRSLEAVLTYALLE-LLKLFGAKVAAALITRLLPNTTLVISNVPGP 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18416859   407 MEEISFRGHPVSYIAPSSYGH-SHALLIHLMSYADKMIISLAYDPTVISDPHKICDDMEESLKAMK 471
Cdd:pfam06974  79 REPLYFAGHPVKYIYPSVPGLpGQALNITIQSYAGKLRIGLAVDRDLIPDPHRLLDDFEEALEELK 144
acyl_WS_DGAT TIGR02946
acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, ...
6-472 3.06e-30

acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274360 [Multi-domain]  Cd Length: 446  Bit Score: 122.41  E-value: 3.06e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859     6 EEPVSPMArvfqspgidLCAVTIMgfktkiNPDVVLDALKQNVS----KHPRF-----SSILSDNGAKWIE-TEVNVEDH 75
Cdd:TIGR02946  12 ETPTRPMH---------IGALAVF------EGPLSFEALRALLEsrlpLAPRFrqrlrEVPLGLGHPYWVEdPDFDLDYH 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    76 V---IVPyidaeeiGEGGQSFIDDYMSRLTMIPLDRSRPLWDIHILNVKTSEAEAVgFIRSHHSLGDGMSLISLMLACTH 152
Cdd:TIGR02946  77 VrrvALP-------APGTRRELLELVGRLMSTPLDRSRPLWEMHLIEGLAGGRFAV-LTKVHHALADGVAGLRLLARLLD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   153 KTSDPDMFSNAIPSMK--RRATMSHSLK---TKGWFlRSIFTIGSTMRLLWNTTIDMLLLLATVLFLKDTKTPLKAGAdv 227
Cdd:TIGR02946 149 DDPDPPPLPAPPPPPQpsTRGLLSGALSglpSALLR-RVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLNGPI-- 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   228 rSNPKRFYHRIISLDDIKLIKNAMNMTINDVLFGITQASLSHYLNRqygtkkeedgaltsyRNNLPDGiRFRVACTVNLR 307
Cdd:TIGR02946 226 -SRKRRFAAQSLPLADVKAVAKAFGVTINDVVLAAVAGALRRYLEE---------------RGELPDD-PLVAMVPVSLR 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   308 SDIGFKPLadmmvkdskcrwGNYFSFIFLPFTIGLQtDPLVYLKMSKSMMARKKHSYHAALVYFIIKIVLKV--FGAKAA 385
Cdd:TIGR02946 289 PMEDDSEG------------GNQVSAVLVPLPTGIA-DPVERLSAIHASMTRAKESGQAMGANALLALSGLLpaPLLRLA 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   386 AELF-DRPVRNTTTCVSNVIGPMEEISFRGHPVSYIAPSS-YGHSHALLIHLMSYADKMIISLAYDPTVISDPHKICDDM 463
Cdd:TIGR02946 356 LRALaRKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSpLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADAL 435

                  ....*....
gi 18416859   464 EESLKAMKA 472
Cdd:TIGR02946 436 EAALEELEA 444
COG4908 COG4908
Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General ...
31-147 7.11e-09

Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General function prediction only];


Pssm-ID: 443936 [Multi-domain]  Cd Length: 243  Bit Score: 56.20  E-value: 7.11e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859  31 FKTKINPDVVLDALKQNVSKHPRFSSILSDNGAKWIEtEVNVEDHVIVPYIDAEEI-GEGGQSFIDDYMSRLTMIPLDRS 109
Cdd:COG4908  26 LEGPLDVEALERALRELVRRHPALRTRFVEEDGEPVQ-RIDPDADLPLEVVDLSALpEPEREAELEELVAEEASRPFDLA 104
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 18416859 110 R-PLWDIHIlnVKTSEAEAVGFIRSHHSLGDGMSLISLM 147
Cdd:COG4908 105 RgPLLRAAL--IRLGEDEHVLLLTIHHIISDGWSLGILL 141
WES_acyltransf pfam03007
Wax ester synthase-like Acyl-CoA acyltransferase domain; This domain is found in wax ester ...
40-259 1.91e-07

Wax ester synthase-like Acyl-CoA acyltransferase domain; This domain is found in wax ester synthase genes. In these proteins this domain catalyzes the CoA dependent acyltransferase reaction with fatty alcohols to form wax esters.


Pssm-ID: 281060 [Multi-domain]  Cd Length: 261  Bit Score: 52.38  E-value: 1.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    40 VLDALKQNVSKHPRFSSILSD-----NGAKWIE-TEVNVEDHV---IVPYidaeeigEGGQSFIDDYMSRLTMIPLDRSR 110
Cdd:pfam03007  39 FREAIEQRLHRAPRFRQRVVVrplglAHPVWVDdPDFDLDYHVrrsALPA-------PGGRRELHELVSRLHSRPLDRSR 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   111 PLWDIHILNVKTSEAEAVgFIRSHHSLGDGMSLISLMLACTHKTSDPDMFSNAIPSMKRraTMSHSLKTKGWF---LRSI 187
Cdd:pfam03007 112 PLWEMHVIEGLEGGRFAV-LTKVHHALADGVGGLNLLARLLDLDPDPPPRPTPPQTPPG--DPRTQLRAGGALvgpAAGL 188
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18416859   188 FTIGSTMRLLWNTTIDMLLLLATVLFLKDTKTPLKAGADVRSNPKRFYHRI-ISLDDIKLIKNAMNMTINDVL 259
Cdd:pfam03007 189 GGVAGGVRGVVRSAGRLLERALEARSVALPFAAPHTPFNAPLSRARRFAAQsLPLADVKAVAKATGVTINDVV 261
 
Name Accession Description Interval E-value
WS_DGAT_C pfam06974
WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS) ...
327-471 1.34e-64

WS/DGAT C-terminal domain; This domain is found at the C-terminus of wax ester synthases (WS)/diacylglycerol O-acyltransferases (DGAT). These enzymes are utilized for the in vivo production of biodiesel and other wax esters.


Pssm-ID: 462057  Cd Length: 144  Bit Score: 205.44  E-value: 1.34e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   327 WGNYFSFIFLPFTIGLqTDPLVYLKMSKSMMARKKHSYHAALVYFIIKiVLKVFGAKAAAELFDRPVRNTTTCVSNVIGP 406
Cdd:pfam06974   1 WGNRFGFVLLPLPTDL-DDPLERLRKAKASMDRKKRSLEAVLTYALLE-LLKLFGAKVAAALITRLLPNTTLVISNVPGP 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18416859   407 MEEISFRGHPVSYIAPSSYGH-SHALLIHLMSYADKMIISLAYDPTVISDPHKICDDMEESLKAMK 471
Cdd:pfam06974  79 REPLYFAGHPVKYIYPSVPGLpGQALNITIQSYAGKLRIGLAVDRDLIPDPHRLLDDFEEALEELK 144
acyl_WS_DGAT TIGR02946
acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, ...
6-472 3.06e-30

acyltransferase, WS/DGAT/MGAT; This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274360 [Multi-domain]  Cd Length: 446  Bit Score: 122.41  E-value: 3.06e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859     6 EEPVSPMArvfqspgidLCAVTIMgfktkiNPDVVLDALKQNVS----KHPRF-----SSILSDNGAKWIE-TEVNVEDH 75
Cdd:TIGR02946  12 ETPTRPMH---------IGALAVF------EGPLSFEALRALLEsrlpLAPRFrqrlrEVPLGLGHPYWVEdPDFDLDYH 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    76 V---IVPyidaeeiGEGGQSFIDDYMSRLTMIPLDRSRPLWDIHILNVKTSEAEAVgFIRSHHSLGDGMSLISLMLACTH 152
Cdd:TIGR02946  77 VrrvALP-------APGTRRELLELVGRLMSTPLDRSRPLWEMHLIEGLAGGRFAV-LTKVHHALADGVAGLRLLARLLD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   153 KTSDPDMFSNAIPSMK--RRATMSHSLK---TKGWFlRSIFTIGSTMRLLWNTTIDMLLLLATVLFLKDTKTPLKAGAdv 227
Cdd:TIGR02946 149 DDPDPPPLPAPPPPPQpsTRGLLSGALSglpSALLR-RVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLNGPI-- 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   228 rSNPKRFYHRIISLDDIKLIKNAMNMTINDVLFGITQASLSHYLNRqygtkkeedgaltsyRNNLPDGiRFRVACTVNLR 307
Cdd:TIGR02946 226 -SRKRRFAAQSLPLADVKAVAKAFGVTINDVVLAAVAGALRRYLEE---------------RGELPDD-PLVAMVPVSLR 288
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   308 SDIGFKPLadmmvkdskcrwGNYFSFIFLPFTIGLQtDPLVYLKMSKSMMARKKHSYHAALVYFIIKIVLKV--FGAKAA 385
Cdd:TIGR02946 289 PMEDDSEG------------GNQVSAVLVPLPTGIA-DPVERLSAIHASMTRAKESGQAMGANALLALSGLLpaPLLRLA 355
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   386 AELF-DRPVRNTTTCVSNVIGPMEEISFRGHPVSYIAPSS-YGHSHALLIHLMSYADKMIISLAYDPTVISDPHKICDDM 463
Cdd:TIGR02946 356 LRALaRKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSpLLDGQGLNITVTSYNGQLDFGLLADRDAVPDPQELADAL 435

                  ....*....
gi 18416859   464 EESLKAMKA 472
Cdd:TIGR02946 436 EAALEELEA 444
COG4908 COG4908
Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General ...
31-147 7.11e-09

Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain [General function prediction only];


Pssm-ID: 443936 [Multi-domain]  Cd Length: 243  Bit Score: 56.20  E-value: 7.11e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859  31 FKTKINPDVVLDALKQNVSKHPRFSSILSDNGAKWIEtEVNVEDHVIVPYIDAEEI-GEGGQSFIDDYMSRLTMIPLDRS 109
Cdd:COG4908  26 LEGPLDVEALERALRELVRRHPALRTRFVEEDGEPVQ-RIDPDADLPLEVVDLSALpEPEREAELEELVAEEASRPFDLA 104
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 18416859 110 R-PLWDIHIlnVKTSEAEAVGFIRSHHSLGDGMSLISLM 147
Cdd:COG4908 105 RgPLLRAAL--IRLGEDEHVLLLTIHHIISDGWSLGILL 141
WES_acyltransf pfam03007
Wax ester synthase-like Acyl-CoA acyltransferase domain; This domain is found in wax ester ...
40-259 1.91e-07

Wax ester synthase-like Acyl-CoA acyltransferase domain; This domain is found in wax ester synthase genes. In these proteins this domain catalyzes the CoA dependent acyltransferase reaction with fatty alcohols to form wax esters.


Pssm-ID: 281060 [Multi-domain]  Cd Length: 261  Bit Score: 52.38  E-value: 1.91e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    40 VLDALKQNVSKHPRFSSILSD-----NGAKWIE-TEVNVEDHV---IVPYidaeeigEGGQSFIDDYMSRLTMIPLDRSR 110
Cdd:pfam03007  39 FREAIEQRLHRAPRFRQRVVVrplglAHPVWVDdPDFDLDYHVrrsALPA-------PGGRRELHELVSRLHSRPLDRSR 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859   111 PLWDIHILNVKTSEAEAVgFIRSHHSLGDGMSLISLMLACTHKTSDPDMFSNAIPSMKRraTMSHSLKTKGWF---LRSI 187
Cdd:pfam03007 112 PLWEMHVIEGLEGGRFAV-LTKVHHALADGVGGLNLLARLLDLDPDPPPRPTPPQTPPG--DPRTQLRAGGALvgpAAGL 188
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18416859   188 FTIGSTMRLLWNTTIDMLLLLATVLFLKDTKTPLKAGADVRSNPKRFYHRI-ISLDDIKLIKNAMNMTINDVL 259
Cdd:pfam03007 189 GGVAGGVRGVVRSAGRLLERALEARSVALPFAAPHTPFNAPLSRARRFAAQsLPLADVKAVAKATGVTINDVV 261
Condensation pfam00668
Condensation domain; This domain is found in many multi-domain enzymes which synthesize ...
28-143 3.39e-03

Condensation domain; This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyzes a condensation reaction to form peptide bonds in non- ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pfam00550). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site.


Pssm-ID: 395541 [Multi-domain]  Cd Length: 454  Bit Score: 39.62  E-value: 3.39e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18416859    28 IMGFKTKINPDVVLDALKQNVSKHP--RFSSILSDNG--AKWIETEVNVEDHVIvpYI-DAEEIGEggQSFIDDYMSRLT 102
Cdd:pfam00668  32 VLKLTGELDPERLEKALQELINRHDalRTVFIRQENGepVQVILEERPFELEII--DIsDLSESEE--EEAIEAFIQRDL 107
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 18416859   103 MIPLD-RSRPLWDIHIlnVKTSEAEAVGFIRSHHSLGDGMSL 143
Cdd:pfam00668 108 QSPFDlEKGPLFRAGL--FRIAENRHHLLLSMHHIIVDGVSL 147
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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