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Conserved domains on  [gi|18422312|ref|NP_568623|]
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chaperone protein dnaJ-like protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK14283 super family cl32987
chaperone protein DnaJ; Provisional
 38-82 5.56e-05

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK14283:

Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 39.81  E-value: 5.56e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 18422312   38 CPTCNGTGRVtcfcSRWSDGDVG-------CRRCSGSGRAA---CSNCGGSGTGR 82
Cdd:PRK14283 166 CPTCGGTGQV----KQVRNTILGqmmnvttCPDCQGEGKIVekpCSNCHGKGVVR 216
 
Name Accession Description Interval E-value
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 38-82 5.56e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 39.81  E-value: 5.56e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 18422312   38 CPTCNGTGRVtcfcSRWSDGDVG-------CRRCSGSGRAA---CSNCGGSGTGR 82
Cdd:PRK14283 166 CPTCGGTGQV----KQVRNTILGqmmnvttCPDCQGEGKIVekpCSNCHGKGVVR 216
 
Name Accession Description Interval E-value
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 38-82 5.56e-05

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 39.81  E-value: 5.56e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 18422312   38 CPTCNGTGRVtcfcSRWSDGDVG-------CRRCSGSGRAA---CSNCGGSGTGR 82
Cdd:PRK14283 166 CPTCGGTGQV----KQVRNTILGqmmnvttCPDCQGEGKIVekpCSNCHGKGVVR 216
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 37-93 2.22e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 38.29  E-value: 2.22e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18422312   37 RCPTCNGTGRVTcfCSRWSDG-----DVGCRRCSGSGRAA---CSNCGGSGTGRPLpAQITVQPP 93
Cdd:PRK14298 160 RCPTCGGTGQVT--TTRSTPLgqfvtTTTCSTCHGRGQVIespCPVCSGTGKVRKT-RKITVNVP 221
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 38-79 3.44e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 37.85  E-value: 3.44e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 18422312   38 CPTCNGTGRVT--------CFCSRWSdgdvgCRRCSGSGRA---ACSNCGGSG 79
Cdd:PRK14282 172 CPKCHGTGRIReerrsffgVFVSERT-----CERCGGTGKIpgeYCHECGGSG 219
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 37-82 4.06e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 37.47  E-value: 4.06e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 18422312   37 RCPTCNGTGRV-----TCFcsrwsdGDV----GCRRCSGSGRA---ACSNCGGSGTGR 82
Cdd:PRK14277 174 TCPVCHGTGQVrtrqnTPF------GRIvnirTCDRCHGEGKIitdPCNKCGGTGRIR 225
PRK14295 PRK14295
molecular chaperone DnaJ;
32-82 4.09e-04

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 37.52  E-value: 4.09e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 18422312   32 AGQFPR-CPTCNGTGRVTCFCSRWSDGDvGCRRCSGSGRAA---CSNCGGSGTGR 82
Cdd:PRK14295 179 NGTTPRvCPTCSGTGQVSRNSGGFSLSE-PCPDCKGRGLIAddpCLVCKGSGRAK 232
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 38-93 4.35e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 37.44  E-value: 4.35e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 18422312   38 CPTCNGTGRV--TCFCSRWSDgdvGCRRCSGSG--RAACSNCGGSGTGrPLPAQITVQPP 93
Cdd:PRK14291 176 CPTCGGSGEIyqRGGFFRISQ---TCPTCGGEGvlREPCSKCNGRGLV-IKKETIKVRIP 231
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 33-80 8.77e-04

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 36.45  E-value: 8.77e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 18422312   33 GQFPRCPTCNGTGRvtcfcSRWSDGD--------VGCRRCSGSGR---AACSNCGGSGT 80
Cdd:PRK14290 163 GKLITCPTCHGTGQ-----QRIVRGQgffrmvtvTTCRTCGGRGRipeEKCPRCNGTGT 216
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 38-79 1.43e-03

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 35.89  E-value: 1.43e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 18422312   38 CPTCNGTGRVtcfcsRWSDG----DVGCRRCSGSGRAA---CSNCGGSG 79
Cdd:PRK10767 162 CPTCHGAGQV-----RMQQGfftvQQTCPTCHGRGKIIkdpCKKCHGQG 205
PRK14297 PRK14297
molecular chaperone DnaJ;
38-82 1.91e-03

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 35.53  E-value: 1.91e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 18422312   38 CPTCNGTGRVT--------CFCSRWSdgdvgCRRCSGSGRA---ACSNCGGSGTGR 82
Cdd:PRK14297 168 CDKCGGTGQIRvqrntplgSFVSTTT-----CDKCGGSGKViedPCNKCHGKGKVR 218
PRK14289 PRK14289
molecular chaperone DnaJ;
38-79 2.53e-03

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 35.19  E-value: 2.53e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 18422312   38 CPTCNGTGRVTcfcsRWSDGDVG-------CRRCSGSGR---AACSNCGGSG 79
Cdd:PRK14289 174 CPTCKGSGSVT----RVQNTILGtmqtqstCPTCNGEGKiikKKCKKCGGEG 221
PRK14279 PRK14279
molecular chaperone DnaJ;
33-93 3.12e-03

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 35.09  E-value: 3.12e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 18422312   33 GQFPR-CPTCNGTGrvtcFCSRwSDGDVG----CRRCSGSGRAA---CSNCGGSGTGRPlPAQITVQPP 93
Cdd:PRK14279 187 GTSPKvCPTCNGSG----VISR-NQGAFGfsepCTDCRGTGSIIedpCEECKGTGVTTR-TRTINVRIP 249
PRK14293 PRK14293
molecular chaperone DnaJ;
38-79 4.15e-03

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 34.58  E-value: 4.15e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 18422312   38 CPTCNGTGrvtcfcSRWSDGDVGCRRCSGSGR---------------AACSNCGGSG 79
Cdd:PRK14293 146 CETCRGSG------AKPGTGPTTCSTCGGAGQvrratrtpfgsftqvSECPTCNGTG 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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