|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
31-243 |
1.84e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 1.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQ--MKKEGQLEAADEE----DSADAAKKKQERDELERIKQAENKKNRLEKSI 104
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLelEELELELEEAQAEeyelLAELARLEQDIARLEERRRELEERLEELEEEL 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 105 ATSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQ--LDAAVEEDSAYAAK 182
Cdd:COG1196 326 AELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLeaLRAAAELAAQLEEL 405
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18423405 183 KKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVA 243
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
30-243 |
2.26e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.34 E-value: 2.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDElERIKQAENKKNRLEKSIATSAA 109
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE-LELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKE--GQLDAAVEEDSAYAAKKKQER 187
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAElaEAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 188 EELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVA 243
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-233 |
7.50e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.01 E-value: 7.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQER----DELERiKQAENKKNRLEKSIAT 106
Cdd:PTZ00121 1336 KKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEkkkaDEAKK-KAEEDKKKADELKKAA 1414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 107 SAAIMAELEKKK---LRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKK-KQMKKEGQLDAAVEEDSAYAAK 182
Cdd:PTZ00121 1415 AAKKKADEAKKKaeeKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKaDEAKKKAEEAKKADEAKKKAEE 1494
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 18423405 183 KKQEREELEriKQAERKK-----RRIEKSIATSAAIRAELEKK--KLRKLEEQRRLDE 233
Cdd:PTZ00121 1495 AKKKADEAK--KAAEAKKkadeaKKAEEAKKADEAKKAEEAKKadEAKKAEEKKKADE 1550
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-233 |
7.57e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.01 E-value: 7.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDEL----ERIKQAENKKNRLEKSIAT 106
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKkkeeAKKKADAAKKKAEEKKKAD 1394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 107 SAAIMAELEKKK---LRKLEEQKRLAEEGAAIAEKKKRRLE-KAIATTAAIRAELEKKKQMKK--EGQLDAAVEEDSAYA 180
Cdd:PTZ00121 1395 EAKKKAEEDKKKadeLKKAAAAKKKADEAKKKAEEKKKADEaKKKAEEAKKADEAKKKAEEAKkaEEAKKKAEEAKKADE 1474
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 181 AKKKQEreelERIKQAERKKRRIEKSIATSAAIRAELEKKK---LRKLEEQRRLDE 233
Cdd:PTZ00121 1475 AKKKAE----EAKKADEAKKKAEEAKKKADEAKKAAEAKKKadeAKKAEEAKKADE 1526
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
30-251 |
1.06e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.03 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAA 109
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKKLRKLEEQKRLAEEGAAIAEKKKR--RLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQER 187
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAeeALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18423405 188 EELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLGED 251
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
31-251 |
1.85e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 1.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKE-----GQLEAADEEDSADAAKKKQERDELE-RIKQAENKKNRLEKSI 104
Cdd:COG1196 281 LELEEAQAEEYELLAELARLEQDIARLEERRREleerlEELEEELAELEEELEELEEELEELEeELEEAEEELEEAEAEL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 105 ATSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKE--GQLDAAVEEDSAYAAK 182
Cdd:COG1196 361 AEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEleELEEALAELEEEEEEE 440
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 18423405 183 KKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLGED 251
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
30-233 |
2.79e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 2.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAA 109
Cdd:PTZ00121 1235 AKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEA 1314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKKLrklEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQE--R 187
Cdd:PTZ00121 1315 KKADEAKKKA---EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEekK 1391
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 18423405 188 EELERIKQAERKKRRIEKSIATSAAIRAELEKKKlrKLEEQRRLDE 233
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKK--KAEEKKKADE 1435
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
30-244 |
2.97e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 2.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQmKKEGQLEAADEEDSADAAKKKQERDELERI-KQAENKKNRLEKSIATSA 108
Cdd:COG1196 269 LEELRLELEELELELEEAQAEEYELLAELA-RLEQDIARLEERRRELEERLEELEEELAELeEELEELEEELEELEEELE 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 AIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQERE 188
Cdd:COG1196 348 EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELE 427
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 189 ELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVAL 244
Cdd:COG1196 428 EALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-242 |
6.77e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 6.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRA--ELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSA 108
Cdd:PTZ00121 1490 KKAEEAKKKADEAKKAAEAKKKadEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEA 1569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 AIMAELEKKKLRKLE-----EQKRLAEEGAAIAEKKKRRLE--KAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAA 181
Cdd:PTZ00121 1570 KKAEEDKNMALRKAEeakkaEEARIEEVMKLYEEEKKMKAEeaKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA 1649
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18423405 182 KKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKL-----------RKLEEQRRLDEEGAAIAEAV 242
Cdd:PTZ00121 1650 EELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAaealkkeaeeaKKAEELKKKEAEEKKKAEEL 1721
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-233 |
2.48e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.00 E-value: 2.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKqmkKEGQLEAADEEDSADAAKKKQE--RDELERIKQAENKKNRLEKSIATSA 108
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKAEEDKKK---ADELKKAAAAKKKADEAKKKAEekKKADEAKKKAEEAKKADEAKKKAEE 1455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 AIMAELEKKKL---RKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKK--------QMKKEGQLDAAVEEDS 177
Cdd:PTZ00121 1456 AKKAEEAKKKAeeaKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKadeakkaeEAKKADEAKKAEEAKK 1535
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 178 AYAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDE 233
Cdd:PTZ00121 1536 ADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEE 1591
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-240 |
5.12e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 5.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 38 RRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQER----DELERIKQAENKKNRLEKSIATSAAIMAE 113
Cdd:PTZ00121 1267 RRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEakkaDEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 114 LEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELEri 193
Cdd:PTZ00121 1347 AAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAK-- 1424
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 18423405 194 KQAERKKRRIEKSIATSAAIRAELEKKKlrklEEQRRLDEEGAAIAE 240
Cdd:PTZ00121 1425 KKAEEKKKADEAKKKAEEAKKADEAKKK----AEEAKKAEEAKKKAE 1467
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
31-243 |
5.28e-09 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 57.65 E-value: 5.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKnRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNrlEKSIATSAAI 110
Cdd:PRK05035 474 KKAAEA-RAAKDKDAVAAALARVKAKKAAATQPIVIKAGARPDNSAVIAAREARKAQARARQAEKQAA--AAADPKKAAV 550
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKKKLRKLEeQKRLAEEGAAIAEKKKRRLEKA-----IATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQ 185
Cdd:PRK05035 551 AAAIARAKAKKAA-QQAANAEAEEEVDPKKAAVAAAiarakAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKA 629
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 18423405 186 EREELERIKQAER-KKRRIEKSIATSAAIRAELEKKKLRKLEEqrrLDEEGAAIAEAVA 243
Cdd:PRK05035 630 EQQANAEPEEPVDpRKAAVAAAIARAKARKAAQQQANAEPEEA---EDPKKAAVAAAIA 685
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
31-249 |
8.11e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 8.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEgQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAI 110
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAEAELAE-AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKegQLDAAVEEDSAYAAKKKQEREEL 190
Cdd:COG1196 409 EEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE--LLAELLEEAALLEAALAELLEEL 486
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 191 ERIKQAERKKRRIEKSIAT-SAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLG 249
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGfLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAA 546
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
28-240 |
2.68e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.92 E-value: 2.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 28 DPIKQAEKKNRRLEKAIATSAAIRAELEKK-KQMKKEgqleaADEEDSADAAKKKQErdelERIKQAENKKNRLEKSIAT 106
Cdd:PTZ00121 1403 DKKKADELKKAAAAKKKADEAKKKAEEKKKaDEAKKK-----AEEAKKADEAKKKAE----EAKKAEEAKKKAEEAKKAD 1473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 107 SAAIMAELEKKK---LRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKK 183
Cdd:PTZ00121 1474 EAKKKAEEAKKAdeaKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKK 1553
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 18423405 184 KQEREELERIKQAERKKRRIEKSiaTSAAIRAELEKK--KLRKLEEQRRLDEEGAAIAE 240
Cdd:PTZ00121 1554 AEELKKAEEKKKAEEAKKAEEDK--NMALRKAEEAKKaeEARIEEVMKLYEEEKKMKAE 1610
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-241 |
2.80e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.92 E-value: 2.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKqmkKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAI 110
Cdd:PTZ00121 1303 KADEAKKKAEEAKKADEAKKKAEEAKKK---ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKK--KLRKLEEQKRLAEEGAAIAE--KKKRRLEKAIATTAAIRAELEKKKQMKKEgqldaAVEEDSAYAAKKKQE 186
Cdd:PTZ00121 1380 ADAAKKKaeEKKKADEAKKKAEEDKKKADelKKAAAAKKKADEAKKKAEEKKKADEAKKK-----AEEAKKADEAKKKAE 1454
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18423405 187 ---------REELERIKQAERKKRRIEKSIATSAAIRAELEKKK---LRKLEEQRRLDEEGAAIAEA 241
Cdd:PTZ00121 1455 eakkaeeakKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKadeAKKAAEAKKKADEAKKAEEA 1521
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
28-233 |
4.58e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 4.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 28 DPIKQAEKKNRRLEKAIATSAAIRAELEKK-KQMKKEGQLEAADEEDSADAAKKKQErdELERIKQAENKKNRLEKSIAT 106
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKaEEKKKADEAKKKAEEDKKKADELKKA--AAAKKKADEAKKKAEEKKKAD 1434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 107 SAAIMAELEKK--KLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKK----QMKKEGQLDAAVEEDSAYA 180
Cdd:PTZ00121 1435 EAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKaeeaKKKADEAKKAAEAKKKADE 1514
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 18423405 181 AKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEK-KKLRKLEEQRRLDE 233
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKaEELKKAEEKKKAEE 1568
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
28-234 |
5.96e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 5.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 28 DPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLE----AADEEDSADAAKKKQErdelERIKQAENKKNRLEKS 103
Cdd:PTZ00121 1408 DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADeakkKAEEAKKAEEAKKKAE----EAKKADEAKKKAEEAK 1483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 104 IATSAAIMAELEKKK---LRKLEEQKRLAEEGAAIAEKKK-----RRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEE 175
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKadeAKKAAEAKKKADEAKKAEEAKKadeakKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEK 1563
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18423405 176 DSAYAAKKKQEREELErIKQAERKKRRIEKSIATSAAIRAELEKKK---LRKLEEQRRLDEE 234
Cdd:PTZ00121 1564 KKAEEAKKAEEDKNMA-LRKAEEAKKAEEARIEEVMKLYEEEKKMKaeeAKKAEEAKIKAEE 1624
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-240 |
1.21e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAI 110
Cdd:PTZ00121 1278 RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD 1357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKKKLR----KLEEQKRLAEEGAAIAEKKKR--RLEKAIATTAAIRAELEKKKQMKKEGQ--LDAAVEEDSAYAAK 182
Cdd:PTZ00121 1358 EAEAAEEKAEaaekKKEEAKKKADAAKKKAEEKKKadEAKKKAEEDKKKADELKKAAAAKKKADeaKKKAEEKKKADEAK 1437
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 183 KKQEreelERIKQAERKKRRIEKSIATSAAIRAELEKK--KLRKLEEQRRLDEEGAAIAE 240
Cdd:PTZ00121 1438 KKAE----EAKKADEAKKKAEEAKKAEEAKKKAEEAKKadEAKKKAEEAKKADEAKKKAE 1493
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
48-243 |
1.47e-07 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 53.03 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 48 AAIRAELEKKKQmkkegqleaadeedsADAAKKK-------QERDELERI-KQAENKKNRLEKSIATSAAIMAELEKKKL 119
Cdd:PRK05035 436 AEIRAIEQEKKK---------------AEEAKARfearqarLEREKAAREaRHKKAAEARAAKDKDAVAAALARVKAKKA 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 120 R----KLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQmkkegqldAAVEEDSAYAAKKK--QEREELERI 193
Cdd:PRK05035 501 AatqpIVIKAGARPDNSAVIAAREARKAQARARQAEKQAAAAADPKK--------AAVAAAIARAKAKKaaQQAANAEAE 572
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 18423405 194 KQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVA 243
Cdd:PRK05035 573 EEVDPKKAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIA 622
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-241 |
1.85e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 1.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKK----EGQLEAADEEDSADAAKKKQE-RDELERIKQAENKKNRLEKSIA 105
Cdd:PTZ00121 1451 KKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAkkadEAKKKAEEAKKKADEAKKAAEaKKKADEAKKAEEAKKADEAKKA 1530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 106 TSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKK----RRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAA 181
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKaeeaKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAE 1610
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 182 KKKQEREE---LERIKQAERKKRRIEKSIATSA-------AIRAELEKKKLRKLEEQRRLDEEGAAIAEA 241
Cdd:PTZ00121 1611 EAKKAEEAkikAEELKKAEEEKKKVEQLKKKEAeekkkaeELKKAEEENKIKAAEEAKKAEEDKKKAEEA 1680
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-241 |
2.13e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDEL-----ERIKQAENKK-------N 98
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMalrkaEEAKKAEEARieevmklY 1601
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 99 RLEKSIATSAAIMAELEKKK---LRKLEEQKRLAEEGAAIAEKKKRRLE--KAIATTAAIRAELEKKKQMKKEGQLDAAV 173
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKaeeLKKAEEEKKKVEQLKKKEAEEKKKAEelKKAEEENKIKAAEEAKKAEEDKKKAEEAK 1681
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 18423405 174 EEDSAYAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEA 241
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
31-251 |
3.31e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEkaiatsaaIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERI-KQAENKKNRLEKSIATSAA 109
Cdd:COG1196 207 RQAEKAERYRE--------LKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELeAELAELEAELEELRLELEE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREE 189
Cdd:COG1196 279 LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEA 358
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18423405 190 leriKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLGED 251
Cdd:COG1196 359 ----ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERL 416
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
53-240 |
8.82e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.89 E-value: 8.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 53 ELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAImaeLEKKKLRKLEEQKRLAEEG 132
Cdd:pfam17380 349 ELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKI---LEEERQRKIQQQKVEMEQI 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 133 AAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDaAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKSIATSAA 212
Cdd:pfam17380 426 RAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVE-RLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEER 504
|
170 180
....*....|....*....|....*...
gi 18423405 213 IRAELEKKKLRKLEEqRRLDEEGAAIAE 240
Cdd:pfam17380 505 KQAMIEEERKRKLLE-KEMEERQKAIYE 531
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
32-228 |
3.18e-06 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 48.79 E-value: 3.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 32 QAEKKNRRLEKAIATSAAIRAELEKKKQMKkegQLEAADEEDSADAAKKKQ-----ERDELERIKQAENKKNRLEKSIAT 106
Cdd:PRK05035 502 ATQPIVIKAGARPDNSAVIAAREARKAQAR---ARQAEKQAAAAADPKKAAvaaaiARAKAKKAAQQAANAEAEEEVDPK 578
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 107 SAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLD---AAVEEDSAYAAKK 183
Cdd:PRK05035 579 KAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDprkAAVAAAIARAKAR 658
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 18423405 184 KQEREELERIKQAERKKRRieksiatsAAIRAELEKKKLRKLEEQ 228
Cdd:PRK05035 659 KAAQQQANAEPEEAEDPKK--------AAVAAAIARAKAKKAAQQ 695
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
31-234 |
6.14e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 6.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQE--RDELERIKQAENKKNRLEKSIATSA 108
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEelKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 AIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKK----------QMKKEGQLDAAVEEDSA 178
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKaeelkkkeaeEKKKAEELKKAEEENKI 1730
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18423405 179 YAAKKKQEREE----LERIKQAERKKRRIEKSIATSAAIRAELEKKK-------LRKLEEQRRLDEE 234
Cdd:PTZ00121 1731 KAEEAKKEAEEdkkkAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKeavieeeLDEEDEKRRMEVD 1797
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-242 |
6.25e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 38 RRLEKAIATSAAIRAELEKK-KQMKKEGQLEAADEEDSADAAKKKQE---RDELERIKQAENK--KNRLEKSIATSAAIM 111
Cdd:PTZ00121 1194 RKAEDARKAEAARKAEEERKaEEARKAEDAKKAEAVKKAEEAKKDAEeakKAEEERNNEEIRKfeEARMAHFARRQAAIK 1273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 112 AELEKK--KLRKLEEQK-----RLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQ---MKKEGQLDAAVEEDSAYAA 181
Cdd:PTZ00121 1274 AEEARKadELKKAEEKKkadeaKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAdaaKKKAEEAKKAAEAAKAEAE 1353
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18423405 182 KKKQEREELERIKQAERKKRRIEKSIATSAAIRAElekkKLRKLEEQRRLDEEGAAIAEAV 242
Cdd:PTZ00121 1354 AAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE----EKKKADEAKKKAEEDKKKADEL 1410
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
51-249 |
9.25e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 9.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 51 RAELEKKKQMKKE---GQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEK-KKLRKLEEQK 126
Cdd:COG4717 55 ADELFKPQGRKPElnlKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKlLQLLPLYQEL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 127 RLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKS 206
Cdd:COG4717 135 EALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEE 214
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 18423405 207 IATSAAIRAELEKK------KLRKLEEQRRLDEEGAAIAEAVALHVLLG 249
Cdd:COG4717 215 LEEAQEELEELEEEleqlenELEAAALEERLKEARLLLLIAAALLALLG 263
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
32-218 |
1.44e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.04 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 32 QAEKKNRRLEKAIATSAAIRAELEKKKQMkkegQLEAADEEDSADAAKKKQERDE----LERIKQ--AENKKNRLEKSIA 105
Cdd:pfam17380 407 LEEERQRKIQQQKVEMEQIRAEQEEARQR----EVRRLEEERAREMERVRLEEQErqqqVERLRQqeEERKRKKLELEKE 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 106 TSAAIMAELEKKKL--RKLEEQKRlaeegAAIAEKKKRR-LEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAK 182
Cdd:pfam17380 483 KRDRKRAEEQRRKIleKELEERKQ-----AMIEEERKRKlLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQ 557
|
170 180 190
....*....|....*....|....*....|....*.
gi 18423405 183 KKQEREELERIKQAERkKRRIEKSIATSAAIRAELE 218
Cdd:pfam17380 558 MRKATEERSRLEAMER-EREMMRQIVESEKARAEYE 592
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-233 |
1.75e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 38 RRLEKAIATSAAIRA-------ELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKS-----IA 105
Cdd:PTZ00121 1170 RKAEDAKKAEAARKAeevrkaeELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAkkaeeER 1249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 106 TSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQ 185
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK 1329
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 18423405 186 EREELERIKQAERKKRRIEKSIATSAAIRAELEKKK-----LRKLEEQRRLDE 233
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaeKKKEEAKKKADA 1382
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
30-242 |
2.01e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAiaTSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDElERIKQAENKKNRLEKSIATSAA 109
Cdd:PTZ00121 1563 KKKAEEAKKAEEDK--NMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE-AKIKAEELKKAEEEKKKVEQLK 1639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKK---LRKLEEQKRLAEEgaaiAEKKKRRLEKAIATTAAIRAELEKKK--QMKKEGQLDAAVEEDSAYAAKKK 184
Cdd:PTZ00121 1640 KKEAEEKKKaeeLKKAEEENKIKAA----EEAKKAEEDKKKAEEAKKAEEDEKKAaeALKKEAEEAKKAEELKKKEAEEK 1715
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18423405 185 QEREELER------IKQAERKKRRIEKSIATSAAIRAELEKKKLRKL-EEQRRLDEEGAAIAEAV 242
Cdd:PTZ00121 1716 KKAEELKKaeeenkIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLkKEEEKKAEEIRKEKEAV 1780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
31-251 |
4.43e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 4.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQmKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAI 110
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEA-QIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERR 839
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKKKLRKLEEQKRLAEEgaaiaekkkrrLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDsAYAAKKKQEREEL 190
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAE-----------IEELEELIEELESELEALLNERASLEEALALLRS-ELEELSEELRELE 907
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18423405 191 ERIKQAERKKRRIEKSIAtsaAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLGED 251
Cdd:TIGR02168 908 SKRSELRRELEELREKLA---QLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIED 965
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
32-243 |
5.05e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 32 QAEKKNRRLEKAIATSAAIRAELEKKKQMKKE--GQLEAADEEDSADAAKKKQERDEL--------ERIKQAENKKNRLE 101
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRErlANLERQLEELEAQLEELESKLDELaeelaeleEKLEELKEELESLE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 102 KSIATSAAIMAELE-------------KKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQ 168
Cdd:TIGR02168 358 AELEELEAELEELEsrleeleeqletlRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE 437
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 169 LDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEE-QRRLDEEGAAIAEAVA 243
Cdd:TIGR02168 438 LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERlQENLEGFSEGVKALLK 513
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
38-243 |
7.21e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 7.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 38 RRLEKAIATSAAIRAELEKK-KQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNrleksiatsaaIMAELEK 116
Cdd:PTZ00121 1164 RKAEEARKAEDAKKAEAARKaEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKK-----------AEAVKKA 1232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 117 KKLRKLEEQKRLAEEGAAIAEKkkRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELErikqa 196
Cdd:PTZ00121 1233 EEAKKDAEEAKKAEEERNNEEI--RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD----- 1305
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 18423405 197 ERKKRRIEKSIATSAAIRAELEKKKL----RKLEEQRRLDEEGAAIAEAVA 243
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKAdaakKKAEEAKKAAEAAKAEAEAAA 1356
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
31-218 |
7.37e-05 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 44.41 E-value: 7.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSAdAAKKKQERDELERIKQAENKKNRLEKSIATSAAI 110
Cdd:PRK09510 83 KKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQA-ALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAK 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 111 MAELEKKKLRKLEEQKRLAEEGAAIAEkkkrrlekaIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREEL 190
Cdd:PRK09510 162 KAAAEAKKKAEAEAAKKAAAEAKKKAE---------AEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAKAAA 232
|
170 180
....*....|....*....|....*...
gi 18423405 191 ERIKQAERKKRRIEKSIATSAAIRAELE 218
Cdd:PRK09510 233 EAKAAAEKAAAAKAAEKAAAAKAAAEVD 260
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
30-240 |
1.26e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.89 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIatsAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDElERIKQAENKKNRLEKSIATSAA 109
Cdd:TIGR02168 686 IEELEEKIAELEKAL---AELRKELEELEEELEQLRKELEELSRQISALRKDLARLE-AEVEQLEERIAQLSKELTELEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEkKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREE 189
Cdd:TIGR02168 762 EIEELE-ERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRL 840
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 18423405 190 LERIKQAERKKRRIEKSIATSAAIRAELEK--KKLRKLEEQRRLDEEGAAIAE 240
Cdd:TIGR02168 841 EDLEEQIEELSEDIESLAAEIEELEELIEEleSELEALLNERASLEEALALLR 893
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
43-243 |
1.54e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 43 AIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKkQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKL 122
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKK-EEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 123 EEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAEL----EKKKQMKKEGQ-LDAAVEEDSAYAAKKKQEREELERIKQA- 196
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQyLKYLAPARREQAEELRADLAELAALRAEl 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 18423405 197 ERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVA 243
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELA 216
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
79-243 |
1.83e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 43.26 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 79 KKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEegaaiAEKKKRRLEKAIATTAAIRAELE 158
Cdd:PRK09510 71 QKSAKRAEEQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQAEE-----AAKQAALKQKQAEEAAAKAAAAA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 159 KKKQMKKEGQLDAAVEEdsAYAAKKKQEREELERIKQAERKKRRIEKSIATSAA---IRAELEKKKLRKLEEQRRLDEEG 235
Cdd:PRK09510 146 KAKAEAEAKRAAAAAKK--AAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAeakKKAEAEAKKKAAAEAKKKAAAEA 223
|
....*...
gi 18423405 236 AAIAEAVA 243
Cdd:PRK09510 224 KAAAAKAA 231
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
10-188 |
2.11e-04 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 43.01 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 10 QAQPIVRKARKKKVKGVVDPIKQAEKKNRRLEKAIATS--------AAIRAELEKKKQMKKEGQLEAADEEDSAD----- 76
Cdd:PRK05035 502 ATQPIVIKAGARPDNSAVIAAREARKAQARARQAEKQAaaaadpkkAAVAAAIARAKAKKAAQQAANAEAEEEVDpkkaa 581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 77 ---------AAKKKQERDELERIKQ---AENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLE 144
Cdd:PRK05035 582 vaaaiarakAKKAAQQAASAEPEEQvaeVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPRKAAVAAAIARAKARKAA 661
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 18423405 145 KAIATTAAIRAELEKKkqmkkegqldAAVEEDSAYAAKKKQERE 188
Cdd:PRK05035 662 QQQANAEPEEAEDPKK----------AAVAAAIARAKAKKAAQQ 695
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
30-229 |
3.16e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.75 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAiraeleKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQA-ENKKNRLEKSIATSA 108
Cdd:TIGR02169 695 SELRRIENRLDELSQELSDA------SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEiENVKSELKELEARIE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 AIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQmkkegqldaAVEEDSAYAAKKKQERE 188
Cdd:TIGR02169 769 ELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN---------RLTLEKEYLEKEIQELQ 839
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 18423405 189 ELERIKQAERK--KRRIEKSIATSAAIRAELEKKK--LRKLEEQR 229
Cdd:TIGR02169 840 EQRIDLKEQIKsiEKEIENLNGKKEELEEELEELEaaLRDLESRL 884
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
30-234 |
3.63e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS--ADAAKKKQERDELERIKQAENKKNRLEKSIATS 107
Cdd:pfam02463 211 EYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESskQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 108 AAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQER 187
Cdd:pfam02463 291 LAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQ 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 18423405 188 EELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEE 234
Cdd:pfam02463 371 LEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQL 417
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
38-205 |
4.35e-04 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 41.78 E-value: 4.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 38 RRLEKAIATSAAIRAELEKKKQMK-KEGQLEAADEEDSADA----AKKKQERDELERIKQAENKKNRLEKSIATSAAIMA 112
Cdd:COG2268 192 RKIAEIIRDARIAEAEAERETEIAiAQANREAEEAELEQEReietARIAEAEAELAKKKAEERREAETARAEAEAAYEIA 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 113 ELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKE-GQLDAAVEEDSAYAAKKKQEREELE 191
Cdd:COG2268 272 EANAEREVQRQLEIAEREREIELQEKEAEREEAELEADVRKPAEAEKQAAEAEAeAEAEAIRAKGLAEAEGKRALAEAWN 351
|
170
....*....|....
gi 18423405 192 RIKQAERKKRRIEK 205
Cdd:COG2268 352 KLGDAAILLMLIEK 365
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
56-249 |
6.49e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 41.33 E-value: 6.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 56 KKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNrleksiatsaaimAELEKKKLRKLEEQKRLAEEGAAI 135
Cdd:PRK09510 77 AEEQRKKKEQQQAEELQQKQAAEQERLKQLEKERLAAQEQKKQ-------------AEEAAKQAALKQKQAEEAAAKAAA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 136 AEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVE-------EDSAYAAKKKQEREELERIKQAERKKRRIEKSIA 208
Cdd:PRK09510 144 AAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEakkkaeaEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEA 223
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 18423405 209 TSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVALHVLLG 249
Cdd:PRK09510 224 KAAAAKAAAEAKAAAEKAAAAKAAEKAAAAKAAAEVDDLFG 264
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
59-237 |
7.63e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 7.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 59 QMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKK--KLRKLEEQKRLaeEGAAIA 136
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKaeEARKAEDAKRV--EIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 137 EKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAE 216
Cdd:PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240
|
170 180
....*....|....*....|...
gi 18423405 217 LEKK--KLRKLEEQRRLDEEGAA 237
Cdd:PTZ00121 1241 EAKKaeEERNNEEIRKFEEARMA 1263
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
65-237 |
8.62e-04 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 40.98 E-value: 8.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 65 QLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKL-EEQKRLAEEGAAIAEKKKRR- 142
Cdd:TIGR02794 56 QQQKKPAAKKEQERQKKLEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQaEEKQKQAEEAKAKQAAEAKAk 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 143 ----LEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYA-AKKKQEREELERIKQAERKKRRIEKSIATSAAIRAEL 217
Cdd:TIGR02794 136 aeaeAERKAKEEAAKQAEEEAKAKAAAEAKKKAEEAKKKAEAeAKAKAEAEAKAKAEEAKAKAEAAKAKAAAEAAAKAEA 215
|
170 180
....*....|....*....|
gi 18423405 218 EKKKLRKLEEQRRLDEEGAA 237
Cdd:TIGR02794 216 EAAAAAAAEAERKADEAELG 235
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
32-124 |
8.94e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 32 QAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADA---AKKKQERDEL-ERIKQAENKKNRLEKSIATS 107
Cdd:COG3096 1006 QLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQELEELGVQADAeaeERARIRRDELhEELSQNRSRRSQLEKQLTRC 1085
|
90
....*....|....*..
gi 18423405 108 AAIMAELEkKKLRKLEE 124
Cdd:COG3096 1086 EAEMDSLQ-KRLRKAER 1101
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
31-174 |
1.68e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 40.37 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERdeleriKQAENKKNRLEKSIATSAAI 110
Cdd:pfam05262 220 EELDKKQIDADKAQQKADFAQDNADKQRDEVRQKQQEAKNLPKPADTSSPKEDK------QVAENQKREIEKAQIEIKKN 293
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18423405 111 MAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVE 174
Cdd:pfam05262 294 DEEALKAKDHKAFDLKQESKASEKEAEDKELEAQKKREPVAEDLQKTKPQVEAQPTSLNEDAID 357
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
30-243 |
1.71e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQmkkegqlEAADEEDSADAAKKKQERdeleRIKQAENKKNRLEKSIATSAA 109
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIA-------ALARRIRALEQELAALEA----ELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELekkkLRKLEEQKR-------LAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQM--KKEGQLDAAVEEDSAYA 180
Cdd:COG4942 105 ELAEL----LRALYRLGRqpplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAElaALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18423405 181 AKKKQEREELERIKQAERKK-RRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAEAVA 243
Cdd:COG4942 181 AELEEERAALEALKAERQKLlARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
29-219 |
1.74e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 29 PIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELE-RIKQAENKKNRLEKSIATS 107
Cdd:COG4913 256 PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEaRLDALREELDELEAQIRGN 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 108 AAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQER 187
Cdd:COG4913 336 GGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALR 415
|
170 180 190
....*....|....*....|....*....|....*.
gi 18423405 188 EELERIKQAERKKRRIEKSI----ATSAAIRAELEK 219
Cdd:COG4913 416 DLRRELRELEAEIASLERRKsnipARLLALRDALAE 451
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
76-243 |
1.85e-03 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 39.83 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 76 DAAKKKQERDELERIKQAENKKNRLEKSIATSAAimAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRA 155
Cdd:TIGR02794 44 DPGAVAQQANRIQQQKKPAAKKEQERQKKLEQQA--EEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 156 ELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEG 235
Cdd:TIGR02794 122 EEAKAKQAAEAKAKAEAEAERKAKEEAAKQAEEEAKAKAAAEAKKKAEEAKKKAEAEAKAKAEAEAKAKAEEAKAKAEAA 201
|
....*...
gi 18423405 236 AAIAEAVA 243
Cdd:TIGR02794 202 KAKAAAEA 209
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
71-208 |
1.94e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 71 EEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATT 150
Cdd:COG1196 640 VTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 18423405 151 AAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEKSIA 208
Cdd:COG1196 720 ELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
30-240 |
2.48e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.05 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEgQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAA 109
Cdd:PRK03918 195 IKEKEKELEEVLREINEISSELPELREELEKLEK-EVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKK 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEKKkLRKLEEQKRLAEEGAAIAE------KKKRRLEKAIATTAAIRAELEKK-----KQMKKEGQLDAAVEEDSA 178
Cdd:PRK03918 274 EIEELEEK-VKELKELKEKAEEYIKLSEfyeeylDELREIEKRLSRLEEEINGIEERikeleEKEERLEELKKKLKELEK 352
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18423405 179 YAAKKKQEREELERIKQAERKKRRIEKSIA--TSAAIRAELEKKKLRKLEEQRRLDEEGAAIAE 240
Cdd:PRK03918 353 RLEELEERHELYEEAKAKKEELERLKKRLTglTPEKLEKELEELEKAKEEIEEEISKITARIGE 416
|
|
| GBP_C |
pfam02841 |
Guanylate-binding protein, C-terminal domain; Transcription of the anti-viral ... |
28-132 |
2.71e-03 |
|
Guanylate-binding protein, C-terminal domain; Transcription of the anti-viral guanylate-binding protein (GBP) is induced by interferon-gamma during macrophage induction. This family contains GBP1 and GPB2, both GTPases capable of binding GTP, GDP and GMP.
Pssm-ID: 460721 [Multi-domain] Cd Length: 297 Bit Score: 39.19 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 28 DPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQleaadeedsadaaKKKQERDELERIKQAENKKNRLEKSIATS 107
Cdd:pfam02841 190 EAILQTDQALTAKEKAIEAERAKAEAAEAEQELLREKQ-------------KEEEQMMEAQERSYQEHVKQLIEKMEAER 256
|
90 100
....*....|....*....|....*
gi 18423405 108 AAIMAELEKKKLRKLEEQKRLAEEG 132
Cdd:pfam02841 257 EQLLAEQERMLEHKLQEQEELLKEG 281
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
30-242 |
3.81e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 30 IKQAEKKNRRLEKAIATSAAirAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAA 109
Cdd:PTZ00121 1111 AEEARKAEEAKKKAEDARKA--EEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVR 1188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 110 IMAELEK-------KKLRKLEEQKRLAE----EGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSA 178
Cdd:PTZ00121 1189 KAEELRKaedarkaEAARKAEEERKAEEarkaEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARR 1268
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18423405 179 YAAKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKK--KLRKLEEQRRLDEEGAAIAEAV 242
Cdd:PTZ00121 1269 QAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKaeEAKKADEAKKKAEEAKKKADAA 1334
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
53-233 |
4.16e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 4.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 53 ELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEEG 132
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDA 1175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 133 AAI-----AEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQE-REELERIKQAERKKRRIEKS 206
Cdd:PTZ00121 1176 KKAeaarkAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEaKKDAEEAKKAEEERNNEEIR 1255
|
170 180
....*....|....*....|....*..
gi 18423405 207 IATSAAIRAELEKKKLRKLEEQRRLDE 233
Cdd:PTZ00121 1256 KFEEARMAHFARRQAAIKAEEARKADE 1282
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
48-234 |
6.87e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 37.98 E-value: 6.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 48 AAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKknRLEKSIATSAAIMAELEKKKLRKLEEQKR 127
Cdd:pfam13868 18 AKCNKERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEE--RKEERKRYRQELEEQIEEREQKRQEEYEE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 128 LAEEGAAIaekkKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSAYAAKKKQEREELERIKQAERKKRRIEksi 207
Cdd:pfam13868 96 KLQEREQM----DEIVERIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKEKAERE--- 168
|
170 180
....*....|....*....|....*..
gi 18423405 208 atsAAIRAELEKKKLRKLEEQRRLDEE 234
Cdd:pfam13868 169 ---EEREAEREEIEEEKEREIARLRAQ 192
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
88-240 |
7.66e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 38.50 E-value: 7.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 88 ERIKQAENKKNRLEKSIATSAAIMAELEkKKLRKLEEQKRLAEEgaaiAEKKKRRLEKAIATTAAIRAELEKKKQMKKEG 167
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRLEDILNELE-RQLKSLERQAEKAER----YKELKAELRELELALLVLRLEELREELEELQE 246
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18423405 168 QLDAAVEEDSAYAAKKKQEREELERIK----QAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAE 240
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEELRlevsELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEA 323
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
31-203 |
8.11e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 38.22 E-value: 8.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 31 KQAEKKnrrLEKAIATSAAIRAELEKK-KQMKKEGQLEAADEEdsadaakkKQERDELER-IKQAENKKNRLEKSIAtsa 108
Cdd:PRK12704 27 KIAEAK---IKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI--------HKLRNEFEKeLRERRNELQKLEKRLL--- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 109 aIMAELEKKKLRKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKK--------KQMKKEGQLDAAVEEDSAYA 180
Cdd:PRK12704 93 -QKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQElerisgltAEEAKEILLEKVEEEARHEA 171
|
170 180
....*....|....*....|...
gi 18423405 181 AKKKQEREElERIKQAERKKRRI 203
Cdd:PRK12704 172 AVLIKEIEE-EAKEEADKKAKEI 193
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
77-234 |
8.34e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 38.13 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 77 AAKKKQERDELERIKQaenKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAEEgaaiAEKKKRRLEKAIATTAAIRAE 156
Cdd:TIGR02169 680 RERLEGLKRELSSLQS---ELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE----EEKLKERLEELEEDLSSLEQE 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 157 LEKKKQMKKEgqLDAAVEEDSAYAAKKKQEREELER------IKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRR 230
Cdd:TIGR02169 753 IENVKSELKE--LEARIEELEEDLHKLEEALNDLEArlshsrIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY 830
|
....
gi 18423405 231 LDEE 234
Cdd:TIGR02169 831 LEKE 834
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
50-234 |
8.47e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 38.18 E-value: 8.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 50 IRAELE---KKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRleksiatsaaimaELEKKKLRKLEEQK 126
Cdd:pfam17380 394 VRQELEaarKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAR-------------EMERVRLEEQERQQ 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 127 RLA--EEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDSayaAKKKQEREELERIKQ-AERKKRRI 203
Cdd:pfam17380 461 QVErlRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEER---KRKLLEKEMEERQKAiYEEERRRE 537
|
170 180 190
....*....|....*....|....*....|.
gi 18423405 204 eksiatsaairAELEKKKLRKLEEQRRLDEE 234
Cdd:pfam17380 538 -----------AEEERRKQQEMEERRRIQEQ 557
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
28-202 |
9.24e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 38.03 E-value: 9.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 28 DPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAENKKNRLEKSIATS 107
Cdd:pfam02463 314 EKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18423405 108 AAIMAELEKKKL----------RKLEEQKRLAEEGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKKEGQLDAAVEEDS 177
Cdd:pfam02463 394 EEELELKSEEEKeaqlllelarQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDL 473
|
170 180
....*....|....*....|....*
gi 18423405 178 AYAAKKKQEREELERIKQAERKKRR 202
Cdd:pfam02463 474 LKETQLVKLQEQLELLLSRQKLEER 498
|
|
| |
