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Conserved domains on  [gi|24640510|ref|NP_572444|]
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uncharacterized protein Dmel_CG2116 [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA00733 super family cl26169
hypothetical protein
 308-357 3.87e-04

hypothetical protein


The actual alignment was detected with superfamily member PHA00733:

Pssm-ID: 177301  Cd Length: 128  Bit Score: 40.63  E-value: 3.87e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 24640510  308 IRPYVCELCTLYFSTKQDLRVHnqRRHLEKEHICEVCGKTFAQNTQLKRH 357
Cdd:PHA00733  71 VSPYVCPLCLMPFSSSVSLKQH--IRYTEHSKVCPVCGKEFRNTDSTLDH 118
zf-C2H2_8 super family cl25789
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 257-339 3.03e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


The actual alignment was detected with superfamily member pfam15909:

Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.40  E-value: 3.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24640510   257 GICPDVMHKSKLSKHHKTHLVPGTN------RYACIYCTETYRDCKYLAGHARRHMGI-RPYVCELCTLYFSTKQDLRVH 329
Cdd:pfam15909   6 GCCLSFPSVRDLAQHLRTHCPPTQSlegklfRCSALSCTETFPSMQELVAHSKLHYKPnRYFKCENCLLRFRTHRSLFKH 85

                          90
                  ....*....|
gi 24640510   330 nqrRHLEKEH 339
Cdd:pfam15909  86 ---LHVCAEH 92
 
Name Accession Description Interval E-value
PHA00733 PHA00733
hypothetical protein
 308-357 3.87e-04

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 40.63  E-value: 3.87e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 24640510  308 IRPYVCELCTLYFSTKQDLRVHnqRRHLEKEHICEVCGKTFAQNTQLKRH 357
Cdd:PHA00733  71 VSPYVCPLCLMPFSSSVSLKQH--IRYTEHSKVCPVCGKEFRNTDSTLDH 118
zf-C2H2_8 pfam15909
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 257-339 3.03e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.40  E-value: 3.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24640510   257 GICPDVMHKSKLSKHHKTHLVPGTN------RYACIYCTETYRDCKYLAGHARRHMGI-RPYVCELCTLYFSTKQDLRVH 329
Cdd:pfam15909   6 GCCLSFPSVRDLAQHLRTHCPPTQSlegklfRCSALSCTETFPSMQELVAHSKLHYKPnRYFKCENCLLRFRTHRSLFKH 85

                          90
                  ....*....|
gi 24640510   330 nqrRHLEKEH 339
Cdd:pfam15909  86 ---LHVCAEH 92
 
Name Accession Description Interval E-value
PHA00733 PHA00733
hypothetical protein
 308-357 3.87e-04

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 40.63  E-value: 3.87e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 24640510  308 IRPYVCELCTLYFSTKQDLRVHnqRRHLEKEHICEVCGKTFAQNTQLKRH 357
Cdd:PHA00733  71 VSPYVCPLCLMPFSSSVSLKQH--IRYTEHSKVCPVCGKEFRNTDSTLDH 118
zf-C2H2_8 pfam15909
C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.
 257-339 3.03e-03

C2H2-type zinc ribbon; This family carries three zinc-fingers in tandem.


Pssm-ID: 464935 [Multi-domain]  Cd Length: 98  Bit Score: 37.40  E-value: 3.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24640510   257 GICPDVMHKSKLSKHHKTHLVPGTN------RYACIYCTETYRDCKYLAGHARRHMGI-RPYVCELCTLYFSTKQDLRVH 329
Cdd:pfam15909   6 GCCLSFPSVRDLAQHLRTHCPPTQSlegklfRCSALSCTETFPSMQELVAHSKLHYKPnRYFKCENCLLRFRTHRSLFKH 85

                          90
                  ....*....|
gi 24640510   330 nqrRHLEKEH 339
Cdd:pfam15909  86 ---LHVCAEH 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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