|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06411 |
PRK06411 |
NADH-quinone oxidoreductase subunit NuoB; |
72-213 |
2.53e-108 |
|
NADH-quinone oxidoreductase subunit NuoB;
Pssm-ID: 235797 Cd Length: 183 Bit Score: 308.83 E-value: 2.53e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPE 151
Cdd:PRK06411 22 LTTLDDLVNWARKNSLWPLTFGLACCAIEMMAAGTSRYDLDRFGMVFRASPRQADLMIVAGTLTNKMAPALRRLYDQMPE 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18859983 152 PRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMK 213
Cdd:PRK06411 102 PKWVISMGSCANSGGMYHYSYSVVQGVDRIVPVDVYVPGCPPRPEALLYGILKLQKKIRQSE 163
|
|
| NuoB |
COG0377 |
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy ... |
72-221 |
8.04e-105 |
|
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy production and conversion]; NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440146 Cd Length: 152 Bit Score: 298.63 E-value: 8.04e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:COG0377 1 LTTLDKLVNWARKNSLWPLTFGLACCAIEMMAAGASRYDLERFGAeVPRASPRQADLMIVAGTVTKKMAPVLRRLYEQMP 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMKTLQMWYRK 221
Cdd:COG0377 81 EPKWVIAMGACAISGGPYWDSYSVVQGVDKIIPVDVYVPGCPPRPEALLDGILKLQEKIRRERLRGRKEYG 151
|
|
| nuoB_fam |
TIGR01957 |
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that ... |
72-211 |
1.94e-101 |
|
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2. [Energy metabolism, Electron transport]
Pssm-ID: 273896 Cd Length: 145 Bit Score: 290.02 E-value: 1.94e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYG-VVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:TIGR01957 4 LTTVDKLLNWGRSNSLWPLTFGLACCAIEMMATGASRYDLDRFGsEVFRASPRQADVMIVAGTVTKKMAPALRRLYDQMP 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKR 211
Cdd:TIGR01957 84 EPKWVISMGACANSGGMFHTSYSVVQGVDRIVPVDVYIPGCPPRPEALIYGLIKLQKKIKR 144
|
|
| Oxidored_q6 |
pfam01058 |
NADH ubiquinone oxidoreductase, 20 Kd subunit; |
97-205 |
8.04e-39 |
|
NADH ubiquinone oxidoreductase, 20 Kd subunit;
Pssm-ID: 426021 [Multi-domain] Cd Length: 124 Bit Score: 130.40 E-value: 8.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 97 CAVEMMHIAAPRYDM-----DRYGVVFRASPR----QADVIIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGY 167
Cdd:pfam01058 4 CTISLLALHPPLLDLldlisLRYGIPLMASPReipeGADVLLVEGAVTRKPKEALERLYEAAPKAKYVIAVGTCAAFGGI 83
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 18859983 168 YH----YSYSvVRGCDRIIPVDIYVPGCPPTAEALMYGVLQL 205
Cdd:pfam01058 84 PAagnnPSYG-VRPVLEVVPVDINIPGCPPHPEAILGTLLAL 124
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06411 |
PRK06411 |
NADH-quinone oxidoreductase subunit NuoB; |
72-213 |
2.53e-108 |
|
NADH-quinone oxidoreductase subunit NuoB;
Pssm-ID: 235797 Cd Length: 183 Bit Score: 308.83 E-value: 2.53e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPE 151
Cdd:PRK06411 22 LTTLDDLVNWARKNSLWPLTFGLACCAIEMMAAGTSRYDLDRFGMVFRASPRQADLMIVAGTLTNKMAPALRRLYDQMPE 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18859983 152 PRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMK 213
Cdd:PRK06411 102 PKWVISMGSCANSGGMYHYSYSVVQGVDRIVPVDVYVPGCPPRPEALLYGILKLQKKIRQSE 163
|
|
| NuoB |
COG0377 |
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy ... |
72-221 |
8.04e-105 |
|
NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase [Energy production and conversion]; NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440146 Cd Length: 152 Bit Score: 298.63 E-value: 8.04e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:COG0377 1 LTTLDKLVNWARKNSLWPLTFGLACCAIEMMAAGASRYDLERFGAeVPRASPRQADLMIVAGTVTKKMAPVLRRLYEQMP 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMKTLQMWYRK 221
Cdd:COG0377 81 EPKWVIAMGACAISGGPYWDSYSVVQGVDKIIPVDVYVPGCPPRPEALLDGILKLQEKIRRERLRGRKEYG 151
|
|
| nuoB_fam |
TIGR01957 |
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that ... |
72-211 |
1.94e-101 |
|
NADH-quinone oxidoreductase, B subunit; This model describes the B chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. The quinone is plastoquinone in Synechocystis (where the chain is designated K) and in chloroplast, where NADH may be replaced by NADPH. In the methanogenic archaeal genus Methanosarcina, NADH is replaced by F420H2. [Energy metabolism, Electron transport]
Pssm-ID: 273896 Cd Length: 145 Bit Score: 290.02 E-value: 1.94e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYG-VVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:TIGR01957 4 LTTVDKLLNWGRSNSLWPLTFGLACCAIEMMATGASRYDLDRFGsEVFRASPRQADVMIVAGTVTKKMAPALRRLYDQMP 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKR 211
Cdd:TIGR01957 84 EPKWVISMGACANSGGMFHTSYSVVQGVDRIVPVDVYIPGCPPRPEALIYGLIKLQKKIKR 144
|
|
| PRK14816 |
PRK14816 |
NADH-quinone oxidoreductase subunit B; |
72-210 |
8.51e-70 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 173277 Cd Length: 182 Bit Score: 211.31 E-value: 8.51e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:PRK14816 28 VGVLDDLINWGRSNSLWPLTFATSCCGIEFMALGAARYDMARFGFeVARASPRQADMIMVCGTITNKMAPVLKRLYDQMA 107
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVK 210
Cdd:PRK14816 108 DPKYVIAVGGCAVSGGPFKKSYHVLNGVDKILPVDVYIPGCPPRPEAFYYGMMQLQRKVK 167
|
|
| PRK14819 |
PRK14819 |
NADH-quinone oxidoreductase subunit B; |
72-220 |
3.58e-69 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 237822 Cd Length: 264 Bit Score: 212.54 E-value: 3.58e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:PRK14819 18 LTTVNRFYNWGRRSSVWPMAFGLACCAIEMMATGLSRYDLARFGAeLFRASPRQADLMIVAGTVTKKMAPQVVRLYNQMP 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMKTLQM-WYR 220
Cdd:PRK14819 98 EPRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQSLGRVrWYG 168
|
|
| PRK14818 |
PRK14818 |
NADH dehydrogenase subunit B; Provisional |
73-210 |
1.37e-66 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173279 Cd Length: 173 Bit Score: 202.87 E-value: 1.37e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 73 ARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPEP 152
Cdd:PRK14818 19 SQLDNLINLARASSLYYLTFGLACCGIELMQTGGPRADVMRFGAIPRASPRQADFMIVAGTLTYKMAERARLLYDQMPEP 98
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 18859983 153 RWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVK 210
Cdd:PRK14818 99 KYVISMGSCSNCGGLFQLGYSVCKGVDKVIPVDVYVPGCPPRPEALTEGLLRLQEIVR 156
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
72-211 |
1.55e-66 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 218.49 E-value: 1.55e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:PRK13292 9 LASLDDLINWGRANSLWPMFFGLSCCFVEMMTSFTSRYDISRFGAeVLRGTPREADLMVIAGTVFKKMAPSILRLYEQMA 88
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 151 EPRWVISMGSCANGGGYYHYsYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKR 211
Cdd:PRK13292 89 EPKWVISMGSCANSGGMYDV-YSVVQGVNQILPVDVYIPGCPPRPEAFLQGLMLLQEKIRR 148
|
|
| ndhK |
CHL00023 |
NADH dehydrogenase subunit K |
62-211 |
4.98e-65 |
|
NADH dehydrogenase subunit K
Pssm-ID: 214337 Cd Length: 225 Bit Score: 200.70 E-value: 4.98e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 62 TKQSSVAewsLARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPA 141
Cdd:CHL00023 12 TTSNSVI---STTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPS 88
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18859983 142 LRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKR 211
Cdd:CHL00023 89 LVRLYEQMPEPKYVIAMGACTITGGMFSTdSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISR 159
|
|
| PRK14813 |
PRK14813 |
NADH dehydrogenase subunit B; Provisional |
75-217 |
1.30e-61 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173274 Cd Length: 189 Bit Score: 190.86 E-value: 1.30e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 75 LDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPEPRW 154
Cdd:PRK14813 18 VDNVLNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLMIVAGTVTMKMAERVVRLYEQMPEPRY 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18859983 155 VISMGSCANGGG-YYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVkRMKTLQM 217
Cdd:PRK14813 98 VLSMGSCSNCGGpYWEHGYHVLKGVDRIIPVDVYVPGCPPRPEALIGGLMKVQELI-RMEQIGI 160
|
|
| PRK14815 |
PRK14815 |
NADH dehydrogenase subunit B; Provisional |
74-221 |
1.39e-61 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 237821 Cd Length: 183 Bit Score: 190.50 E-value: 1.39e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 74 RLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPEP 152
Cdd:PRK14815 22 TLDAAINWIRKNSLWPMPMGLACCAIELMAVACSRFDISRFGAeVMRFSPRQADVMIVAGTVTYKMALAVRRIYDQMPEP 101
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 18859983 153 RWVISMGSCANGGGYYHySYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKRMKTLQMWYRK 221
Cdd:PRK14815 102 KWVIAMGACASSGGMYR-SYSVLQGVDRILPVDVYISGCPPRPEAILDALIKLQKKIDTERAARTLFKK 169
|
|
| PRK14820 |
PRK14820 |
NADH-quinone oxidoreductase subunit B; |
74-210 |
2.43e-55 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 184833 Cd Length: 180 Bit Score: 174.63 E-value: 2.43e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 74 RLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYG---VVFraSPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:PRK14820 22 SLDSVIGLARKNSLWPLPFATSCCGIEFMATMASHYDLARFGserPSF--SPRQADMLMVMGTIAKKMAPVLKQVYLQMA 99
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 151 EPRWVISMGSCANGGGYYHySYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVK 210
Cdd:PRK14820 100 EPRWVVAVGACASSGGIFD-TYSVLQGIDRIIPVDVYVPGCPPRPEQIIDGVMRVQELVK 158
|
|
| PRK14814 |
PRK14814 |
NADH dehydrogenase subunit B; Provisional |
72-210 |
6.03e-55 |
|
NADH dehydrogenase subunit B; Provisional
Pssm-ID: 173275 Cd Length: 186 Bit Score: 173.67 E-value: 6.03e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 72 LARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRA-SPRQADVIIVAGTLTNKMAPALRKVYDQMP 150
Cdd:PRK14814 20 LGNLESVIQWGRSFSLWPYPFATACCGIEYMSTACSDYDIARFGAERPSfSPRQADMILVLGTITYKMAPVLRQIYDQMA 99
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 151 EPRWVISMGSCANGGGYYHySYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVK 210
Cdd:PRK14814 100 EPKFVISVGACASSGGMFH-TYGVLQGVDRILPVDVYVPGCPPRPEAILDALVKLQTKLK 158
|
|
| HycG |
COG3260 |
Ni,Fe-hydrogenase III small subunit [Energy production and conversion]; |
81-211 |
6.76e-54 |
|
Ni,Fe-hydrogenase III small subunit [Energy production and conversion];
Pssm-ID: 442491 Cd Length: 137 Bit Score: 169.20 E-value: 6.76e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 81 WGRKGSIWPLTF--GlAC--CAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVAGTLTNKMAPALRKVYDQMPEPRWVI 156
Cdd:COG3260 1 KVLGRSLWIRHVdaG-SCngCEIEILALLTPRYDLERFGIKFVASPRHADVLLVTGPVTRNMREALLRTYEAMPEPKVVV 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 18859983 157 SMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVKR 211
Cdd:COG3260 80 AVGDCACSGGVFRDSYAVLGGVDKVIPVDVYIPGCPPRPEAILDGLLKALGRLEE 134
|
|
| PRK14817 |
PRK14817 |
NADH-quinone oxidoreductase subunit B; |
79-210 |
1.51e-52 |
|
NADH-quinone oxidoreductase subunit B;
Pssm-ID: 173278 Cd Length: 181 Bit Score: 167.44 E-value: 1.51e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 79 LNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVF-RASPRQADVIIVAGTLTNKMAPALRKVYDQMPEPRWVIS 157
Cdd:PRK14817 29 LGWARKYSLFTYPFVTACCGMEYMTMASARYDSDRFGAAMpRFSPRQADLLMVVGTVNCKQAPILQRVYEQMADPKWVMA 108
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 18859983 158 MGSCANGGGYYHySYSVVRGCDRIIPVDIYVPGCPPTAEALMYGVLQLQKKVK 210
Cdd:PRK14817 109 FGVCASSGGFYD-NYATVQGIDRIIPVDVYVPGCPPRPEQVLDGIMLLQKKIQ 160
|
|
| Oxidored_q6 |
pfam01058 |
NADH ubiquinone oxidoreductase, 20 Kd subunit; |
97-205 |
8.04e-39 |
|
NADH ubiquinone oxidoreductase, 20 Kd subunit;
Pssm-ID: 426021 [Multi-domain] Cd Length: 124 Bit Score: 130.40 E-value: 8.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 97 CAVEMMHIAAPRYDM-----DRYGVVFRASPR----QADVIIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGY 167
Cdd:pfam01058 4 CTISLLALHPPLLDLldlisLRYGIPLMASPReipeGADVLLVEGAVTRKPKEALERLYEAAPKAKYVIAVGTCAAFGGI 83
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 18859983 168 YH----YSYSvVRGCDRIIPVDIYVPGCPPTAEALMYGVLQL 205
Cdd:pfam01058 84 PAagnnPSYG-VRPVLEVVPVDINIPGCPPHPEAILGTLLAL 124
|
|
| FrhG |
COG1941 |
Coenzyme F420-reducing hydrogenase, gamma subunit [Energy production and conversion]; |
122-198 |
6.88e-07 |
|
Coenzyme F420-reducing hydrogenase, gamma subunit [Energy production and conversion];
Pssm-ID: 441544 [Multi-domain] Cd Length: 262 Bit Score: 48.39 E-value: 6.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18859983 122 PRQADVIIVAGTLTNK----MAPALRKVYDQmpeprwVISMGSCANGGG----------------YYHYSYSV------- 174
Cdd:COG1941 50 PEPVDVALVEGSIRNEeneeRLKEIREKSKI------LVALGACAVTGGipalrnlydleellerVYGETPSTnpqipge 123
|
90 100 110
....*....|....*....|....*....|..
gi 18859983 175 --------VRGCDRIIPVDIYVPGCPPTAEAL 198
Cdd:COG1941 124 elpelldrVRPLSEVVKVDYELPGCPPDPDQI 155
|
|
|